2021-08-06 18:24:44 [time] __start__
2021-08-06 18:24:44 [monitor] cgroup memory limit of 137438953472 bytes detected
2021-08-06 18:24:49 [monitor] Process tree:
                                 PID VSZ(mb) RSS(mb) Procs  Read(mb) (calls) Write(mb) (calls) COMMAND
                              203456  193334      10     6         0      41         0       7 /gpfs/share/apps/cellranger/arc-2.0.0/external/martian/bin/mrjob /gpfs/share/apps/cellranger/arc-2.0.0/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/cellranger/arc-2.0.0/mro/atac_rna/stages/processing/check_joint_barcodes_compatibility main /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/CHECK_JOINT_BARCODES_COMPATIBILITY/fork0/chnk0-u45960db6ac /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/CHECK_JOINT_BARCODES_COMPATIBILITY/fork0/chnk0-u45960db6ac/files /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/journal/SC_ATAC_GEX_COUNTER_CS.SC_ATAC_GEX_COUNTER.CHECK_JOINT_BARCODES_COMPATIBILITY.fork0.chnk0.u45960db6ac 
                              203461     372      39     1         0     797         0      21   python /gpfs/share/apps/cellranger/arc-2.0.0/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/cellranger/arc-2.0.0/mro/atac_rna/stages/processing/check_joint_barcodes_compatibility main /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/CHECK_JOINT_BARCODES_COMPATIBILITY/fork0/chnk0-u45960db6ac /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/CHECK_JOINT_BARCODES_COMPATIBILITY/fork0/chnk0-u45960db6ac/files /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/journal/SC_ATAC_GEX_COUNTER_CS.SC_ATAC_GEX_COUNTER.CHECK_JOINT_BARCODES_COMPATIBILITY.fork0.chnk0.u45960db6ac 
2021-08-06 18:24:49 [monitor] Stage exceeded its address space quota (using 189.2, allowed 7G)
2021-08-06 18:24:54 [monitor] Process tree:
                                 PID VSZ(mb) RSS(mb) Procs  Read(mb) (calls) Write(mb) (calls) COMMAND
                              203456  193334      10     6         0      70         0       9 /gpfs/share/apps/cellranger/arc-2.0.0/external/martian/bin/mrjob /gpfs/share/apps/cellranger/arc-2.0.0/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/cellranger/arc-2.0.0/mro/atac_rna/stages/processing/check_joint_barcodes_compatibility main /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/CHECK_JOINT_BARCODES_COMPATIBILITY/fork0/chnk0-u45960db6ac /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/CHECK_JOINT_BARCODES_COMPATIBILITY/fork0/chnk0-u45960db6ac/files /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/journal/SC_ATAC_GEX_COUNTER_CS.SC_ATAC_GEX_COUNTER.CHECK_JOINT_BARCODES_COMPATIBILITY.fork0.chnk0.u45960db6ac 
                              203461     409      60     1         0    1786         0      21   python /gpfs/share/apps/cellranger/arc-2.0.0/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/cellranger/arc-2.0.0/mro/atac_rna/stages/processing/check_joint_barcodes_compatibility main /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/CHECK_JOINT_BARCODES_COMPATIBILITY/fork0/chnk0-u45960db6ac /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/CHECK_JOINT_BARCODES_COMPATIBILITY/fork0/chnk0-u45960db6ac/files /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/journal/SC_ATAC_GEX_COUNTER_CS.SC_ATAC_GEX_COUNTER.CHECK_JOINT_BARCODES_COMPATIBILITY.fork0.chnk0.u45960db6ac 
2021-08-06 18:24:54 [monitor] Stage exceeded its address space quota (using 189.2, allowed 7G)
2021-08-06 18:24:59 [monitor] Process tree:
                                 PID VSZ(mb) RSS(mb) Procs  Read(mb) (calls) Write(mb) (calls) COMMAND
                              203456  193334      10     6         0     100         0      12 /gpfs/share/apps/cellranger/arc-2.0.0/external/martian/bin/mrjob /gpfs/share/apps/cellranger/arc-2.0.0/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/cellranger/arc-2.0.0/mro/atac_rna/stages/processing/check_joint_barcodes_compatibility main /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/CHECK_JOINT_BARCODES_COMPATIBILITY/fork0/chnk0-u45960db6ac /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/CHECK_JOINT_BARCODES_COMPATIBILITY/fork0/chnk0-u45960db6ac/files /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/journal/SC_ATAC_GEX_COUNTER_CS.SC_ATAC_GEX_COUNTER.CHECK_JOINT_BARCODES_COMPATIBILITY.fork0.chnk0.u45960db6ac 
                              203461     799     446     1         0    1880         0      40   python /gpfs/share/apps/cellranger/arc-2.0.0/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/cellranger/arc-2.0.0/mro/atac_rna/stages/processing/check_joint_barcodes_compatibility main /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/CHECK_JOINT_BARCODES_COMPATIBILITY/fork0/chnk0-u45960db6ac /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/CHECK_JOINT_BARCODES_COMPATIBILITY/fork0/chnk0-u45960db6ac/files /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/journal/SC_ATAC_GEX_COUNTER_CS.SC_ATAC_GEX_COUNTER.CHECK_JOINT_BARCODES_COMPATIBILITY.fork0.chnk0.u45960db6ac 
2021-08-06 18:24:59 [monitor] Stage exceeded its address space quota (using 189.6, allowed 7G)
2021-08-06 18:25:01 [info] {
    "barcodes_are_compatible": true,
    "num_atac_reads": 0,
    "num_gex_reads": 0,
    "num_matched_bcs": 0,
    "pearson_corr": null,
    "pearson_pval": null
}
2021-08-06 18:25:01 [time] __end__
