2021-08-06 22:29:04 [time] __start__
2021-08-06 22:29:04 [monitor] cgroup memory limit of 137438953472 bytes detected
2021-08-06 22:29:09 [monitor] Process tree:
                                 PID VSZ(mb) RSS(mb) Procs  Read(mb) (calls) Write(mb) (calls) COMMAND
                              259632  193334      10     6         0      39         0       6 /gpfs/share/apps/cellranger/arc-2.0.0/external/martian/bin/mrjob /gpfs/share/apps/cellranger/arc-2.0.0/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/cellranger/arc-2.0.0/mro/rna/stages/counter/summarize_reports main /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/GEX_SUMMARIZE_REPORTS/fork0/chnk0-u45960deff0 /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/GEX_SUMMARIZE_REPORTS/fork0/chnk0-u45960deff0/files /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/journal/SC_ATAC_GEX_COUNTER_CS.SC_ATAC_GEX_COUNTER.GEX_SUMMARIZE_REPORTS.fork0.chnk0.u45960deff0 
                              259639     552     105     1         0    3741         0      42   python /gpfs/share/apps/cellranger/arc-2.0.0/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/cellranger/arc-2.0.0/mro/rna/stages/counter/summarize_reports main /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/GEX_SUMMARIZE_REPORTS/fork0/chnk0-u45960deff0 /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/GEX_SUMMARIZE_REPORTS/fork0/chnk0-u45960deff0/files /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/journal/SC_ATAC_GEX_COUNTER_CS.SC_ATAC_GEX_COUNTER.GEX_SUMMARIZE_REPORTS.fork0.chnk0.u45960deff0 
2021-08-06 22:29:09 [monitor] Stage exceeded its address space quota (using 189.3, allowed 11G)
2021-08-06 22:29:14 [monitor] Process tree:
                                 PID VSZ(mb) RSS(mb) Procs  Read(mb) (calls) Write(mb) (calls) COMMAND
                              259632  193334      10     6         0      68         0       8 /gpfs/share/apps/cellranger/arc-2.0.0/external/martian/bin/mrjob /gpfs/share/apps/cellranger/arc-2.0.0/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/cellranger/arc-2.0.0/mro/rna/stages/counter/summarize_reports main /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/GEX_SUMMARIZE_REPORTS/fork0/chnk0-u45960deff0 /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/GEX_SUMMARIZE_REPORTS/fork0/chnk0-u45960deff0/files /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/journal/SC_ATAC_GEX_COUNTER_CS.SC_ATAC_GEX_COUNTER.GEX_SUMMARIZE_REPORTS.fork0.chnk0.u45960deff0 
                              259639     673     159     1         0    4903         0      42   python /gpfs/share/apps/cellranger/arc-2.0.0/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/cellranger/arc-2.0.0/mro/rna/stages/counter/summarize_reports main /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/GEX_SUMMARIZE_REPORTS/fork0/chnk0-u45960deff0 /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/GEX_SUMMARIZE_REPORTS/fork0/chnk0-u45960deff0/files /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/journal/SC_ATAC_GEX_COUNTER_CS.SC_ATAC_GEX_COUNTER.GEX_SUMMARIZE_REPORTS.fork0.chnk0.u45960deff0 
2021-08-06 22:29:14 [monitor] Stage exceeded its address space quota (using 189.5, allowed 11G)
2021-08-06 22:29:19 [monitor] Process tree:
                                 PID VSZ(mb) RSS(mb) Procs  Read(mb) (calls) Write(mb) (calls) COMMAND
                              259632  193334      10     6         0      97         0      10 /gpfs/share/apps/cellranger/arc-2.0.0/external/martian/bin/mrjob /gpfs/share/apps/cellranger/arc-2.0.0/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/cellranger/arc-2.0.0/mro/rna/stages/counter/summarize_reports main /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/GEX_SUMMARIZE_REPORTS/fork0/chnk0-u45960deff0 /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/GEX_SUMMARIZE_REPORTS/fork0/chnk0-u45960deff0/files /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/journal/SC_ATAC_GEX_COUNTER_CS.SC_ATAC_GEX_COUNTER.GEX_SUMMARIZE_REPORTS.fork0.chnk0.u45960deff0 
                              259639     698     178     1         0    6352         0      42   python /gpfs/share/apps/cellranger/arc-2.0.0/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/cellranger/arc-2.0.0/mro/rna/stages/counter/summarize_reports main /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/GEX_SUMMARIZE_REPORTS/fork0/chnk0-u45960deff0 /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/GEX_SUMMARIZE_REPORTS/fork0/chnk0-u45960deff0/files /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/journal/SC_ATAC_GEX_COUNTER_CS.SC_ATAC_GEX_COUNTER.GEX_SUMMARIZE_REPORTS.fork0.chnk0.u45960deff0 
2021-08-06 22:29:19 [monitor] Stage exceeded its address space quota (using 189.5, allowed 11G)
2021-08-06 22:29:24 [time] __end__
