2021-08-06 20:37:15 [time] __start__
2021-08-06 20:37:15 [monitor] cgroup memory limit of 137438953472 bytes detected
2021-08-06 20:37:20 [monitor] Process tree:
                                 PID VSZ(mb) RSS(mb) Procs  Read(mb) (calls) Write(mb) (calls) COMMAND
                              227390  231773      10     7         0      45         0       6 /gpfs/share/apps/cellranger/arc-2.0.0/external/martian/bin/mrjob /gpfs/share/apps/cellranger/arc-2.0.0/lib/bin/cr_lib martian write_pos_bam join /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/WRITE_POS_BAM/fork0/join-u45960dd236 /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/WRITE_POS_BAM/fork0/join-u45960dd236/files /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/journal/SC_ATAC_GEX_COUNTER_CS.SC_ATAC_GEX_COUNTER.WRITE_POS_BAM.fork0.u45960dd236 
                              227397      32       4     1         0      27         0      55   /gpfs/share/apps/cellranger/arc-2.0.0/lib/bin/cr_lib martian write_pos_bam join /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/WRITE_POS_BAM/fork0/join-u45960dd236 /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/WRITE_POS_BAM/fork0/join-u45960dd236/files /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/journal/SC_ATAC_GEX_COUNTER_CS.SC_ATAC_GEX_COUNTER.WRITE_POS_BAM.fork0.u45960dd236 
                              227399      24      10     1         0   70174         0     547     samtools cat --threads 3 -b /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/WRITE_POS_BAM/fork0/join-u45960dd236/files/pos_sorted_non_multiplexed.fofn -o /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/WRITE_POS_BAM/fork0/join-u45960dd236/files/pos_sorted_non_multiplexed.bam 
2021-08-06 20:37:20 [monitor] Stage exceeded its address space quota (using 226.4, allowed 7G)
2021-08-06 20:37:25 [monitor] Process tree:
                                 PID VSZ(mb) RSS(mb) Procs  Read(mb) (calls) Write(mb) (calls) COMMAND
                              227390  231773      10     7         0      90         0       9 /gpfs/share/apps/cellranger/arc-2.0.0/external/martian/bin/mrjob /gpfs/share/apps/cellranger/arc-2.0.0/lib/bin/cr_lib martian write_pos_bam join /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/WRITE_POS_BAM/fork0/join-u45960dd236 /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/WRITE_POS_BAM/fork0/join-u45960dd236/files /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/journal/SC_ATAC_GEX_COUNTER_CS.SC_ATAC_GEX_COUNTER.WRITE_POS_BAM.fork0.u45960dd236 
                              227397      32       4     1         0      27         0      55   /gpfs/share/apps/cellranger/arc-2.0.0/lib/bin/cr_lib martian write_pos_bam join /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/WRITE_POS_BAM/fork0/join-u45960dd236 /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/WRITE_POS_BAM/fork0/join-u45960dd236/files /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/journal/SC_ATAC_GEX_COUNTER_CS.SC_ATAC_GEX_COUNTER.WRITE_POS_BAM.fork0.u45960dd236 
                              227399      24      10     1         0  187728         0    1465     samtools cat --threads 3 -b /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/WRITE_POS_BAM/fork0/join-u45960dd236/files/pos_sorted_non_multiplexed.fofn -o /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/WRITE_POS_BAM/fork0/join-u45960dd236/files/pos_sorted_non_multiplexed.bam 
2021-08-06 20:37:25 [monitor] Stage exceeded its address space quota (using 226.4, allowed 7G)
2021-08-06 20:37:30 [monitor] Process tree:
                                 PID VSZ(mb) RSS(mb) Procs  Read(mb) (calls) Write(mb) (calls) COMMAND
                              227390  231774      10     7         0     135         0      12 /gpfs/share/apps/cellranger/arc-2.0.0/external/martian/bin/mrjob /gpfs/share/apps/cellranger/arc-2.0.0/lib/bin/cr_lib martian write_pos_bam join /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/WRITE_POS_BAM/fork0/join-u45960dd236 /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/WRITE_POS_BAM/fork0/join-u45960dd236/files /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/journal/SC_ATAC_GEX_COUNTER_CS.SC_ATAC_GEX_COUNTER.WRITE_POS_BAM.fork0.u45960dd236 
                              227397      32       4     1         0      27         0      55   /gpfs/share/apps/cellranger/arc-2.0.0/lib/bin/cr_lib martian write_pos_bam join /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/WRITE_POS_BAM/fork0/join-u45960dd236 /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/WRITE_POS_BAM/fork0/join-u45960dd236/files /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/journal/SC_ATAC_GEX_COUNTER_CS.SC_ATAC_GEX_COUNTER.WRITE_POS_BAM.fork0.u45960dd236 
                              227399      24      10     1         0  308572         0    2409     samtools cat --threads 3 -b /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/WRITE_POS_BAM/fork0/join-u45960dd236/files/pos_sorted_non_multiplexed.fofn -o /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/WRITE_POS_BAM/fork0/join-u45960dd236/files/pos_sorted_non_multiplexed.bam 
2021-08-06 20:37:30 [monitor] Stage exceeded its address space quota (using 226.4, allowed 7G)
2021-08-06 20:37:35 [monitor] Process tree:
                                 PID VSZ(mb) RSS(mb) Procs  Read(mb) (calls) Write(mb) (calls) COMMAND
                              227390  231774      10     7         0     184         0      15 /gpfs/share/apps/cellranger/arc-2.0.0/external/martian/bin/mrjob /gpfs/share/apps/cellranger/arc-2.0.0/lib/bin/cr_lib martian write_pos_bam join /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/WRITE_POS_BAM/fork0/join-u45960dd236 /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/WRITE_POS_BAM/fork0/join-u45960dd236/files /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/journal/SC_ATAC_GEX_COUNTER_CS.SC_ATAC_GEX_COUNTER.WRITE_POS_BAM.fork0.u45960dd236 
                              227397      32       4     1         0  366436         0    2917   /gpfs/share/apps/cellranger/arc-2.0.0/lib/bin/cr_lib martian write_pos_bam join /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/WRITE_POS_BAM/fork0/join-u45960dd236 /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/WRITE_POS_BAM/fork0/join-u45960dd236/files /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/journal/SC_ATAC_GEX_COUNTER_CS.SC_ATAC_GEX_COUNTER.WRITE_POS_BAM.fork0.u45960dd236 
                              227430  154285       5     5         0   26990         0       0     samtools index -@ 3 /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/WRITE_POS_BAM/fork0/join-u45960dd236/files/pos_sorted_non_multiplexed.bam /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/WRITE_POS_BAM/fork0/join-u45960dd236/files/pos_sorted_non_multiplexed.bam.bai 
2021-08-06 20:37:35 [monitor] Stage exceeded its address space quota (using 377.0, allowed 7G)
2021-08-06 20:37:40 [monitor] Process tree:
                                 PID VSZ(mb) RSS(mb) Procs  Read(mb) (calls) Write(mb) (calls) COMMAND
                              227390  231774      10     7         0     237         0      18 /gpfs/share/apps/cellranger/arc-2.0.0/external/martian/bin/mrjob /gpfs/share/apps/cellranger/arc-2.0.0/lib/bin/cr_lib martian write_pos_bam join /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/WRITE_POS_BAM/fork0/join-u45960dd236 /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/WRITE_POS_BAM/fork0/join-u45960dd236/files /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/journal/SC_ATAC_GEX_COUNTER_CS.SC_ATAC_GEX_COUNTER.WRITE_POS_BAM.fork0.u45960dd236 
                              227397      32       4     1         0  366436         0    2917   /gpfs/share/apps/cellranger/arc-2.0.0/lib/bin/cr_lib martian write_pos_bam join /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/WRITE_POS_BAM/fork0/join-u45960dd236 /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/WRITE_POS_BAM/fork0/join-u45960dd236/files /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/journal/SC_ATAC_GEX_COUNTER_CS.SC_ATAC_GEX_COUNTER.WRITE_POS_BAM.fork0.u45960dd236 
                              227430  154291      10     5         0   73930         0       0     samtools index -@ 3 /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/WRITE_POS_BAM/fork0/join-u45960dd236/files/pos_sorted_non_multiplexed.bam /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/WRITE_POS_BAM/fork0/join-u45960dd236/files/pos_sorted_non_multiplexed.bam.bai 
2021-08-06 20:37:40 [monitor] Stage exceeded its address space quota (using 377.0, allowed 7G)
2021-08-06 20:37:45 [monitor] Process tree:
                                 PID VSZ(mb) RSS(mb) Procs  Read(mb) (calls) Write(mb) (calls) COMMAND
                              227390  231774      10     7         0     290         0      21 /gpfs/share/apps/cellranger/arc-2.0.0/external/martian/bin/mrjob /gpfs/share/apps/cellranger/arc-2.0.0/lib/bin/cr_lib martian write_pos_bam join /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/WRITE_POS_BAM/fork0/join-u45960dd236 /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/WRITE_POS_BAM/fork0/join-u45960dd236/files /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/journal/SC_ATAC_GEX_COUNTER_CS.SC_ATAC_GEX_COUNTER.WRITE_POS_BAM.fork0.u45960dd236 
                              227397      32       4     1         0  366436         0    2917   /gpfs/share/apps/cellranger/arc-2.0.0/lib/bin/cr_lib martian write_pos_bam join /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/WRITE_POS_BAM/fork0/join-u45960dd236 /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/WRITE_POS_BAM/fork0/join-u45960dd236/files /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/journal/SC_ATAC_GEX_COUNTER_CS.SC_ATAC_GEX_COUNTER.WRITE_POS_BAM.fork0.u45960dd236 
                              227430  154297      16     5         0  120619         0       0     samtools index -@ 3 /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/WRITE_POS_BAM/fork0/join-u45960dd236/files/pos_sorted_non_multiplexed.bam /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/WRITE_POS_BAM/fork0/join-u45960dd236/files/pos_sorted_non_multiplexed.bam.bai 
2021-08-06 20:37:45 [monitor] Stage exceeded its address space quota (using 377.1, allowed 7G)
2021-08-06 20:37:50 [monitor] Process tree:
                                 PID VSZ(mb) RSS(mb) Procs  Read(mb) (calls) Write(mb) (calls) COMMAND
                              227390  231774      10     7         0     343         0      24 /gpfs/share/apps/cellranger/arc-2.0.0/external/martian/bin/mrjob /gpfs/share/apps/cellranger/arc-2.0.0/lib/bin/cr_lib martian write_pos_bam join /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/WRITE_POS_BAM/fork0/join-u45960dd236 /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/WRITE_POS_BAM/fork0/join-u45960dd236/files /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/journal/SC_ATAC_GEX_COUNTER_CS.SC_ATAC_GEX_COUNTER.WRITE_POS_BAM.fork0.u45960dd236 
                              227397      32       4     1         0  366436         0    2917   /gpfs/share/apps/cellranger/arc-2.0.0/lib/bin/cr_lib martian write_pos_bam join /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/WRITE_POS_BAM/fork0/join-u45960dd236 /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/WRITE_POS_BAM/fork0/join-u45960dd236/files /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/journal/SC_ATAC_GEX_COUNTER_CS.SC_ATAC_GEX_COUNTER.WRITE_POS_BAM.fork0.u45960dd236 
                              227430  154303      21     5         0  167247         0       0     samtools index -@ 3 /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/WRITE_POS_BAM/fork0/join-u45960dd236/files/pos_sorted_non_multiplexed.bam /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/WRITE_POS_BAM/fork0/join-u45960dd236/files/pos_sorted_non_multiplexed.bam.bai 
2021-08-06 20:37:50 [monitor] Stage exceeded its address space quota (using 377.1, allowed 7G)
2021-08-06 20:37:55 [monitor] Process tree:
                                 PID VSZ(mb) RSS(mb) Procs  Read(mb) (calls) Write(mb) (calls) COMMAND
                              227390  231774      10     7         0     396         0      27 /gpfs/share/apps/cellranger/arc-2.0.0/external/martian/bin/mrjob /gpfs/share/apps/cellranger/arc-2.0.0/lib/bin/cr_lib martian write_pos_bam join /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/WRITE_POS_BAM/fork0/join-u45960dd236 /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/WRITE_POS_BAM/fork0/join-u45960dd236/files /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/journal/SC_ATAC_GEX_COUNTER_CS.SC_ATAC_GEX_COUNTER.WRITE_POS_BAM.fork0.u45960dd236 
                              227397      32       4     1         0  366436         0    2917   /gpfs/share/apps/cellranger/arc-2.0.0/lib/bin/cr_lib martian write_pos_bam join /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/WRITE_POS_BAM/fork0/join-u45960dd236 /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/WRITE_POS_BAM/fork0/join-u45960dd236/files /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/journal/SC_ATAC_GEX_COUNTER_CS.SC_ATAC_GEX_COUNTER.WRITE_POS_BAM.fork0.u45960dd236 
                              227430  154308      26     5         0  213778         0       0     samtools index -@ 3 /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/WRITE_POS_BAM/fork0/join-u45960dd236/files/pos_sorted_non_multiplexed.bam /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/WRITE_POS_BAM/fork0/join-u45960dd236/files/pos_sorted_non_multiplexed.bam.bai 
2021-08-06 20:37:55 [monitor] Stage exceeded its address space quota (using 377.1, allowed 7G)
2021-08-06 20:38:00 [monitor] Process tree:
                                 PID VSZ(mb) RSS(mb) Procs  Read(mb) (calls) Write(mb) (calls) COMMAND
                              227390  231774      10     7         0     449         0      30 /gpfs/share/apps/cellranger/arc-2.0.0/external/martian/bin/mrjob /gpfs/share/apps/cellranger/arc-2.0.0/lib/bin/cr_lib martian write_pos_bam join /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/WRITE_POS_BAM/fork0/join-u45960dd236 /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/WRITE_POS_BAM/fork0/join-u45960dd236/files /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/journal/SC_ATAC_GEX_COUNTER_CS.SC_ATAC_GEX_COUNTER.WRITE_POS_BAM.fork0.u45960dd236 
                              227397      32       4     1         0  366436         0    2917   /gpfs/share/apps/cellranger/arc-2.0.0/lib/bin/cr_lib martian write_pos_bam join /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/WRITE_POS_BAM/fork0/join-u45960dd236 /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/WRITE_POS_BAM/fork0/join-u45960dd236/files /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/journal/SC_ATAC_GEX_COUNTER_CS.SC_ATAC_GEX_COUNTER.WRITE_POS_BAM.fork0.u45960dd236 
                              227430  154313      31     5         0  261445         0       0     samtools index -@ 3 /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/WRITE_POS_BAM/fork0/join-u45960dd236/files/pos_sorted_non_multiplexed.bam /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/WRITE_POS_BAM/fork0/join-u45960dd236/files/pos_sorted_non_multiplexed.bam.bai 
2021-08-06 20:38:00 [monitor] Stage exceeded its address space quota (using 377.1, allowed 7G)
2021-08-06 20:38:05 [monitor] Process tree:
                                 PID VSZ(mb) RSS(mb) Procs  Read(mb) (calls) Write(mb) (calls) COMMAND
                              227390  231774      10     7         0     502         0      33 /gpfs/share/apps/cellranger/arc-2.0.0/external/martian/bin/mrjob /gpfs/share/apps/cellranger/arc-2.0.0/lib/bin/cr_lib martian write_pos_bam join /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/WRITE_POS_BAM/fork0/join-u45960dd236 /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/WRITE_POS_BAM/fork0/join-u45960dd236/files /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/journal/SC_ATAC_GEX_COUNTER_CS.SC_ATAC_GEX_COUNTER.WRITE_POS_BAM.fork0.u45960dd236 
                              227397      32       4     1         0  366436         0    2917   /gpfs/share/apps/cellranger/arc-2.0.0/lib/bin/cr_lib martian write_pos_bam join /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/WRITE_POS_BAM/fork0/join-u45960dd236 /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/WRITE_POS_BAM/fork0/join-u45960dd236/files /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/journal/SC_ATAC_GEX_COUNTER_CS.SC_ATAC_GEX_COUNTER.WRITE_POS_BAM.fork0.u45960dd236 
                              227430  154319      37     5         0  308149         0       0     samtools index -@ 3 /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/WRITE_POS_BAM/fork0/join-u45960dd236/files/pos_sorted_non_multiplexed.bam /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/WRITE_POS_BAM/fork0/join-u45960dd236/files/pos_sorted_non_multiplexed.bam.bai 
2021-08-06 20:38:05 [monitor] Stage exceeded its address space quota (using 377.1, allowed 7G)
2021-08-06 20:38:10 [monitor] Process tree:
                                 PID VSZ(mb) RSS(mb) Procs  Read(mb) (calls) Write(mb) (calls) COMMAND
                              227390  231774      10     7         0     555         0      36 /gpfs/share/apps/cellranger/arc-2.0.0/external/martian/bin/mrjob /gpfs/share/apps/cellranger/arc-2.0.0/lib/bin/cr_lib martian write_pos_bam join /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/WRITE_POS_BAM/fork0/join-u45960dd236 /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/WRITE_POS_BAM/fork0/join-u45960dd236/files /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/journal/SC_ATAC_GEX_COUNTER_CS.SC_ATAC_GEX_COUNTER.WRITE_POS_BAM.fork0.u45960dd236 
                              227397      32       4     1         0  366436         0    2917   /gpfs/share/apps/cellranger/arc-2.0.0/lib/bin/cr_lib martian write_pos_bam join /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/WRITE_POS_BAM/fork0/join-u45960dd236 /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/WRITE_POS_BAM/fork0/join-u45960dd236/files /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/journal/SC_ATAC_GEX_COUNTER_CS.SC_ATAC_GEX_COUNTER.WRITE_POS_BAM.fork0.u45960dd236 
                              227430  154326      43     5         0  354970         0       0     samtools index -@ 3 /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/WRITE_POS_BAM/fork0/join-u45960dd236/files/pos_sorted_non_multiplexed.bam /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/WRITE_POS_BAM/fork0/join-u45960dd236/files/pos_sorted_non_multiplexed.bam.bai 
2021-08-06 20:38:10 [monitor] Stage exceeded its address space quota (using 377.1, allowed 7G)
2021-08-06 20:38:15 [monitor] Process tree:
                                 PID VSZ(mb) RSS(mb) Procs  Read(mb) (calls) Write(mb) (calls) COMMAND
                              227390  231774      10     7         0     608         0      39 /gpfs/share/apps/cellranger/arc-2.0.0/external/martian/bin/mrjob /gpfs/share/apps/cellranger/arc-2.0.0/lib/bin/cr_lib martian write_pos_bam join /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/WRITE_POS_BAM/fork0/join-u45960dd236 /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/WRITE_POS_BAM/fork0/join-u45960dd236/files /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/journal/SC_ATAC_GEX_COUNTER_CS.SC_ATAC_GEX_COUNTER.WRITE_POS_BAM.fork0.u45960dd236 
                              227397      32       4     1         0  366436         0    2917   /gpfs/share/apps/cellranger/arc-2.0.0/lib/bin/cr_lib martian write_pos_bam join /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/WRITE_POS_BAM/fork0/join-u45960dd236 /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/WRITE_POS_BAM/fork0/join-u45960dd236/files /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/journal/SC_ATAC_GEX_COUNTER_CS.SC_ATAC_GEX_COUNTER.WRITE_POS_BAM.fork0.u45960dd236 
                              227430  154333      50     5         0  401746         0       0     samtools index -@ 3 /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/WRITE_POS_BAM/fork0/join-u45960dd236/files/pos_sorted_non_multiplexed.bam /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/WRITE_POS_BAM/fork0/join-u45960dd236/files/pos_sorted_non_multiplexed.bam.bai 
2021-08-06 20:38:15 [monitor] Stage exceeded its address space quota (using 377.1, allowed 7G)
2021-08-06 20:38:20 [monitor] Process tree:
                                 PID VSZ(mb) RSS(mb) Procs  Read(mb) (calls) Write(mb) (calls) COMMAND
                              227390  231774      10     7         0     661         0      42 /gpfs/share/apps/cellranger/arc-2.0.0/external/martian/bin/mrjob /gpfs/share/apps/cellranger/arc-2.0.0/lib/bin/cr_lib martian write_pos_bam join /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/WRITE_POS_BAM/fork0/join-u45960dd236 /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/WRITE_POS_BAM/fork0/join-u45960dd236/files /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/journal/SC_ATAC_GEX_COUNTER_CS.SC_ATAC_GEX_COUNTER.WRITE_POS_BAM.fork0.u45960dd236 
                              227397      32       4     1         0  366436         0    2917   /gpfs/share/apps/cellranger/arc-2.0.0/lib/bin/cr_lib martian write_pos_bam join /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/WRITE_POS_BAM/fork0/join-u45960dd236 /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/WRITE_POS_BAM/fork0/join-u45960dd236/files /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/journal/SC_ATAC_GEX_COUNTER_CS.SC_ATAC_GEX_COUNTER.WRITE_POS_BAM.fork0.u45960dd236 
                              227430  154333      50     5         0  452674         0       0     samtools index -@ 3 /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/WRITE_POS_BAM/fork0/join-u45960dd236/files/pos_sorted_non_multiplexed.bam /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/WRITE_POS_BAM/fork0/join-u45960dd236/files/pos_sorted_non_multiplexed.bam.bai 
2021-08-06 20:38:20 [monitor] Stage exceeded its address space quota (using 377.1, allowed 7G)
2021-08-06 20:38:25 [monitor] Process tree:
                                 PID VSZ(mb) RSS(mb) Procs  Read(mb) (calls) Write(mb) (calls) COMMAND
                              227390  231774      10     7         0     714         0      45 /gpfs/share/apps/cellranger/arc-2.0.0/external/martian/bin/mrjob /gpfs/share/apps/cellranger/arc-2.0.0/lib/bin/cr_lib martian write_pos_bam join /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/WRITE_POS_BAM/fork0/join-u45960dd236 /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/WRITE_POS_BAM/fork0/join-u45960dd236/files /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/journal/SC_ATAC_GEX_COUNTER_CS.SC_ATAC_GEX_COUNTER.WRITE_POS_BAM.fork0.u45960dd236 
                              227397      32       4     1         0  366436         0    2917   /gpfs/share/apps/cellranger/arc-2.0.0/lib/bin/cr_lib martian write_pos_bam join /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/WRITE_POS_BAM/fork0/join-u45960dd236 /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/WRITE_POS_BAM/fork0/join-u45960dd236/files /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/journal/SC_ATAC_GEX_COUNTER_CS.SC_ATAC_GEX_COUNTER.WRITE_POS_BAM.fork0.u45960dd236 
                              227430  154333      50     5         0  502751         0       0     samtools index -@ 3 /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/WRITE_POS_BAM/fork0/join-u45960dd236/files/pos_sorted_non_multiplexed.bam /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/WRITE_POS_BAM/fork0/join-u45960dd236/files/pos_sorted_non_multiplexed.bam.bai 
2021-08-06 20:38:25 [monitor] Stage exceeded its address space quota (using 377.1, allowed 7G)
2021-08-06 20:38:30 [monitor] Process tree:
                                 PID VSZ(mb) RSS(mb) Procs  Read(mb) (calls) Write(mb) (calls) COMMAND
                              227390  231774      10     7         0     767         0      48 /gpfs/share/apps/cellranger/arc-2.0.0/external/martian/bin/mrjob /gpfs/share/apps/cellranger/arc-2.0.0/lib/bin/cr_lib martian write_pos_bam join /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/WRITE_POS_BAM/fork0/join-u45960dd236 /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/WRITE_POS_BAM/fork0/join-u45960dd236/files /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/journal/SC_ATAC_GEX_COUNTER_CS.SC_ATAC_GEX_COUNTER.WRITE_POS_BAM.fork0.u45960dd236 
                              227397      32       4     1         0  366436         0    2917   /gpfs/share/apps/cellranger/arc-2.0.0/lib/bin/cr_lib martian write_pos_bam join /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/WRITE_POS_BAM/fork0/join-u45960dd236 /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/WRITE_POS_BAM/fork0/join-u45960dd236/files /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/journal/SC_ATAC_GEX_COUNTER_CS.SC_ATAC_GEX_COUNTER.WRITE_POS_BAM.fork0.u45960dd236 
                              227430  154333      50     5         0  552065         0       0     samtools index -@ 3 /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/WRITE_POS_BAM/fork0/join-u45960dd236/files/pos_sorted_non_multiplexed.bam /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/WRITE_POS_BAM/fork0/join-u45960dd236/files/pos_sorted_non_multiplexed.bam.bai 
2021-08-06 20:38:30 [monitor] Stage exceeded its address space quota (using 377.1, allowed 7G)
2021-08-06 20:38:35 [monitor] Process tree:
                                 PID VSZ(mb) RSS(mb) Procs  Read(mb) (calls) Write(mb) (calls) COMMAND
                              227390  231774      10     7         0     820         0      51 /gpfs/share/apps/cellranger/arc-2.0.0/external/martian/bin/mrjob /gpfs/share/apps/cellranger/arc-2.0.0/lib/bin/cr_lib martian write_pos_bam join /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/WRITE_POS_BAM/fork0/join-u45960dd236 /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/WRITE_POS_BAM/fork0/join-u45960dd236/files /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/journal/SC_ATAC_GEX_COUNTER_CS.SC_ATAC_GEX_COUNTER.WRITE_POS_BAM.fork0.u45960dd236 
                              227397      32       4     1         0  366436         0    2917   /gpfs/share/apps/cellranger/arc-2.0.0/lib/bin/cr_lib martian write_pos_bam join /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/WRITE_POS_BAM/fork0/join-u45960dd236 /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/WRITE_POS_BAM/fork0/join-u45960dd236/files /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/journal/SC_ATAC_GEX_COUNTER_CS.SC_ATAC_GEX_COUNTER.WRITE_POS_BAM.fork0.u45960dd236 
                              227430  154333      50     5         0  601493         0       0     samtools index -@ 3 /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/WRITE_POS_BAM/fork0/join-u45960dd236/files/pos_sorted_non_multiplexed.bam /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/WRITE_POS_BAM/fork0/join-u45960dd236/files/pos_sorted_non_multiplexed.bam.bai 
2021-08-06 20:38:35 [monitor] Stage exceeded its address space quota (using 377.1, allowed 7G)
2021-08-06 20:38:40 [monitor] Process tree:
                                 PID VSZ(mb) RSS(mb) Procs  Read(mb) (calls) Write(mb) (calls) COMMAND
                              227390  231774      10     7         0     873         0      54 /gpfs/share/apps/cellranger/arc-2.0.0/external/martian/bin/mrjob /gpfs/share/apps/cellranger/arc-2.0.0/lib/bin/cr_lib martian write_pos_bam join /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/WRITE_POS_BAM/fork0/join-u45960dd236 /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/WRITE_POS_BAM/fork0/join-u45960dd236/files /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/journal/SC_ATAC_GEX_COUNTER_CS.SC_ATAC_GEX_COUNTER.WRITE_POS_BAM.fork0.u45960dd236 
                              227397      32       4     1         0  366436         0    2917   /gpfs/share/apps/cellranger/arc-2.0.0/lib/bin/cr_lib martian write_pos_bam join /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/WRITE_POS_BAM/fork0/join-u45960dd236 /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/WRITE_POS_BAM/fork0/join-u45960dd236/files /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/journal/SC_ATAC_GEX_COUNTER_CS.SC_ATAC_GEX_COUNTER.WRITE_POS_BAM.fork0.u45960dd236 
                              227430  154336      52     5         0  649941         0       0     samtools index -@ 3 /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/WRITE_POS_BAM/fork0/join-u45960dd236/files/pos_sorted_non_multiplexed.bam /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/WRITE_POS_BAM/fork0/join-u45960dd236/files/pos_sorted_non_multiplexed.bam.bai 
2021-08-06 20:38:40 [monitor] Stage exceeded its address space quota (using 377.1, allowed 7G)
2021-08-06 20:38:45 [monitor] Process tree:
                                 PID VSZ(mb) RSS(mb) Procs  Read(mb) (calls) Write(mb) (calls) COMMAND
                              227390  231774      10     7         0     926         0      57 /gpfs/share/apps/cellranger/arc-2.0.0/external/martian/bin/mrjob /gpfs/share/apps/cellranger/arc-2.0.0/lib/bin/cr_lib martian write_pos_bam join /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/WRITE_POS_BAM/fork0/join-u45960dd236 /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/WRITE_POS_BAM/fork0/join-u45960dd236/files /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/journal/SC_ATAC_GEX_COUNTER_CS.SC_ATAC_GEX_COUNTER.WRITE_POS_BAM.fork0.u45960dd236 
                              227397      32       4     1         0  366436         0    2917   /gpfs/share/apps/cellranger/arc-2.0.0/lib/bin/cr_lib martian write_pos_bam join /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/WRITE_POS_BAM/fork0/join-u45960dd236 /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/WRITE_POS_BAM/fork0/join-u45960dd236/files /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/journal/SC_ATAC_GEX_COUNTER_CS.SC_ATAC_GEX_COUNTER.WRITE_POS_BAM.fork0.u45960dd236 
                              227430  154337      53     5         0  706074         0       0     samtools index -@ 3 /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/WRITE_POS_BAM/fork0/join-u45960dd236/files/pos_sorted_non_multiplexed.bam /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/WRITE_POS_BAM/fork0/join-u45960dd236/files/pos_sorted_non_multiplexed.bam.bai 
2021-08-06 20:38:45 [monitor] Stage exceeded its address space quota (using 377.1, allowed 7G)
2021-08-06 20:38:48 [time] __end__
