@include "rna/_basic_sc_rna_counter_stages.mro"

call SUBSAMPLE_READS(
    molecule_info     = "/gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/_GEX_CELLS_REPORTER/WRITE_MOLECULE_INFO/fork0/chnk0-u45960dea93/files/molecule_info_non_multiplexed.h5",
    filtered_barcodes = "/gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/_JOINT_CELL_DETECTOR/DETECT_JOINT_CELL_BARCODES/fork0/join-u45960dea76/files/cell_barcodes.csv",
    target_mode       = null,
)
