2021-08-06 22:06:53 [time] __start__
2021-08-06 22:06:53 [monitor] cgroup memory limit of 137438953472 bytes detected
2021-08-06 22:06:58 [monitor] Process tree:
                                 PID VSZ(mb) RSS(mb) Procs  Read(mb) (calls) Write(mb) (calls) COMMAND
                              253238  193334      10     6         0      39         0       6 /gpfs/share/apps/cellranger/arc-2.0.0/external/martian/bin/mrjob /gpfs/share/apps/cellranger/arc-2.0.0/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/cellranger/arc-2.0.0/mro/atac_rna/stages/processing/generate_sc_atac_counts main /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/_JOINT_CELL_DETECTOR/GENERATE_SC_ATAC_COUNTS/fork0/chnk18-u45960dea95 /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/_JOINT_CELL_DETECTOR/GENERATE_SC_ATAC_COUNTS/fork0/chnk18-u45960dea95/files /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/journal/SC_ATAC_GEX_COUNTER_CS.SC_ATAC_GEX_COUNTER._JOINT_CELL_DETECTOR.GENERATE_SC_ATAC_COUNTS.fork0.chnk18.u45960dea95 
                              253244     455     100     1         0    3609         0    4121   python /gpfs/share/apps/cellranger/arc-2.0.0/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/cellranger/arc-2.0.0/mro/atac_rna/stages/processing/generate_sc_atac_counts main /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/_JOINT_CELL_DETECTOR/GENERATE_SC_ATAC_COUNTS/fork0/chnk18-u45960dea95 /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/_JOINT_CELL_DETECTOR/GENERATE_SC_ATAC_COUNTS/fork0/chnk18-u45960dea95/files /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/journal/SC_ATAC_GEX_COUNTER_CS.SC_ATAC_GEX_COUNTER._JOINT_CELL_DETECTOR.GENERATE_SC_ATAC_COUNTS.fork0.chnk18.u45960dea95 
2021-08-06 22:06:58 [monitor] Stage exceeded its address space quota (using 189.2, allowed 9G)
2021-08-06 22:07:03 [monitor] Process tree:
                                 PID VSZ(mb) RSS(mb) Procs  Read(mb) (calls) Write(mb) (calls) COMMAND
                              253238  193334      10     6         0      68         0       8 /gpfs/share/apps/cellranger/arc-2.0.0/external/martian/bin/mrjob /gpfs/share/apps/cellranger/arc-2.0.0/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/cellranger/arc-2.0.0/mro/atac_rna/stages/processing/generate_sc_atac_counts main /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/_JOINT_CELL_DETECTOR/GENERATE_SC_ATAC_COUNTS/fork0/chnk18-u45960dea95 /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/_JOINT_CELL_DETECTOR/GENERATE_SC_ATAC_COUNTS/fork0/chnk18-u45960dea95/files /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/journal/SC_ATAC_GEX_COUNTER_CS.SC_ATAC_GEX_COUNTER._JOINT_CELL_DETECTOR.GENERATE_SC_ATAC_COUNTS.fork0.chnk18.u45960dea95 
                              253244     457     102     1         0    4186         0    4121   python /gpfs/share/apps/cellranger/arc-2.0.0/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/cellranger/arc-2.0.0/mro/atac_rna/stages/processing/generate_sc_atac_counts main /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/_JOINT_CELL_DETECTOR/GENERATE_SC_ATAC_COUNTS/fork0/chnk18-u45960dea95 /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/_JOINT_CELL_DETECTOR/GENERATE_SC_ATAC_COUNTS/fork0/chnk18-u45960dea95/files /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/journal/SC_ATAC_GEX_COUNTER_CS.SC_ATAC_GEX_COUNTER._JOINT_CELL_DETECTOR.GENERATE_SC_ATAC_COUNTS.fork0.chnk18.u45960dea95 
2021-08-06 22:07:03 [monitor] Stage exceeded its address space quota (using 189.2, allowed 9G)
2021-08-06 22:07:08 [monitor] Process tree:
                                 PID VSZ(mb) RSS(mb) Procs  Read(mb) (calls) Write(mb) (calls) COMMAND
                              253238  193334      10     6         0      98         0      11 /gpfs/share/apps/cellranger/arc-2.0.0/external/martian/bin/mrjob /gpfs/share/apps/cellranger/arc-2.0.0/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/cellranger/arc-2.0.0/mro/atac_rna/stages/processing/generate_sc_atac_counts main /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/_JOINT_CELL_DETECTOR/GENERATE_SC_ATAC_COUNTS/fork0/chnk18-u45960dea95 /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/_JOINT_CELL_DETECTOR/GENERATE_SC_ATAC_COUNTS/fork0/chnk18-u45960dea95/files /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/journal/SC_ATAC_GEX_COUNTER_CS.SC_ATAC_GEX_COUNTER._JOINT_CELL_DETECTOR.GENERATE_SC_ATAC_COUNTS.fork0.chnk18.u45960dea95 
                              253244     464     108     1         0    4763         0    4121   python /gpfs/share/apps/cellranger/arc-2.0.0/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/cellranger/arc-2.0.0/mro/atac_rna/stages/processing/generate_sc_atac_counts main /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/_JOINT_CELL_DETECTOR/GENERATE_SC_ATAC_COUNTS/fork0/chnk18-u45960dea95 /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/_JOINT_CELL_DETECTOR/GENERATE_SC_ATAC_COUNTS/fork0/chnk18-u45960dea95/files /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/journal/SC_ATAC_GEX_COUNTER_CS.SC_ATAC_GEX_COUNTER._JOINT_CELL_DETECTOR.GENERATE_SC_ATAC_COUNTS.fork0.chnk18.u45960dea95 
2021-08-06 22:07:08 [monitor] Stage exceeded its address space quota (using 189.3, allowed 9G)
2021-08-06 22:07:13 [monitor] Process tree:
                                 PID VSZ(mb) RSS(mb) Procs  Read(mb) (calls) Write(mb) (calls) COMMAND
                              253238  193334      10     6         0     127         0      13 /gpfs/share/apps/cellranger/arc-2.0.0/external/martian/bin/mrjob /gpfs/share/apps/cellranger/arc-2.0.0/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/cellranger/arc-2.0.0/mro/atac_rna/stages/processing/generate_sc_atac_counts main /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/_JOINT_CELL_DETECTOR/GENERATE_SC_ATAC_COUNTS/fork0/chnk18-u45960dea95 /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/_JOINT_CELL_DETECTOR/GENERATE_SC_ATAC_COUNTS/fork0/chnk18-u45960dea95/files /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/journal/SC_ATAC_GEX_COUNTER_CS.SC_ATAC_GEX_COUNTER._JOINT_CELL_DETECTOR.GENERATE_SC_ATAC_COUNTS.fork0.chnk18.u45960dea95 
                              253244     464     109     1         0    5346         0    4121   python /gpfs/share/apps/cellranger/arc-2.0.0/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/cellranger/arc-2.0.0/mro/atac_rna/stages/processing/generate_sc_atac_counts main /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/_JOINT_CELL_DETECTOR/GENERATE_SC_ATAC_COUNTS/fork0/chnk18-u45960dea95 /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/_JOINT_CELL_DETECTOR/GENERATE_SC_ATAC_COUNTS/fork0/chnk18-u45960dea95/files /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/journal/SC_ATAC_GEX_COUNTER_CS.SC_ATAC_GEX_COUNTER._JOINT_CELL_DETECTOR.GENERATE_SC_ATAC_COUNTS.fork0.chnk18.u45960dea95 
2021-08-06 22:07:13 [monitor] Stage exceeded its address space quota (using 189.3, allowed 9G)
2021-08-06 22:07:13 [time] __end__
