2021-08-06 21:50:05 [time] __start__
2021-08-06 21:50:05 [monitor] cgroup memory limit of 137438953472 bytes detected
2021-08-06 21:50:10 [monitor] Process tree:
                                 PID VSZ(mb) RSS(mb) Procs  Read(mb) (calls) Write(mb) (calls) COMMAND
                              248038  193334      10     6         0      39         0       6 /gpfs/share/apps/cellranger/arc-2.0.0/external/martian/bin/mrjob /gpfs/share/apps/cellranger/arc-2.0.0/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/cellranger/arc-2.0.0/mro/atac/stages/processing/cell_calling/remove_gel_bead_doublet_barcodes main /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/_JOINT_CELL_DETECTOR/REMOVE_GEL_BEAD_DOUBLET_BARCODES/fork0/chnk04-u45960de6cd /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/_JOINT_CELL_DETECTOR/REMOVE_GEL_BEAD_DOUBLET_BARCODES/fork0/chnk04-u45960de6cd/files /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/journal/SC_ATAC_GEX_COUNTER_CS.SC_ATAC_GEX_COUNTER._JOINT_CELL_DETECTOR.REMOVE_GEL_BEAD_DOUBLET_BARCODES.fork0.chnk04.u45960de6cd 
                              248066    1247     902     1         0    1266         0      40   python /gpfs/share/apps/cellranger/arc-2.0.0/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/cellranger/arc-2.0.0/mro/atac/stages/processing/cell_calling/remove_gel_bead_doublet_barcodes main /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/_JOINT_CELL_DETECTOR/REMOVE_GEL_BEAD_DOUBLET_BARCODES/fork0/chnk04-u45960de6cd /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/_JOINT_CELL_DETECTOR/REMOVE_GEL_BEAD_DOUBLET_BARCODES/fork0/chnk04-u45960de6cd/files /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/journal/SC_ATAC_GEX_COUNTER_CS.SC_ATAC_GEX_COUNTER._JOINT_CELL_DETECTOR.REMOVE_GEL_BEAD_DOUBLET_BARCODES.fork0.chnk04.u45960de6cd 
2021-08-06 21:50:10 [monitor] Stage exceeded its address space quota (using 190.0, allowed 6G)
2021-08-06 21:50:15 [monitor] Process tree:
                                 PID VSZ(mb) RSS(mb) Procs  Read(mb) (calls) Write(mb) (calls) COMMAND
                              248038  193334      10     6         0      68         0       8 /gpfs/share/apps/cellranger/arc-2.0.0/external/martian/bin/mrjob /gpfs/share/apps/cellranger/arc-2.0.0/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/cellranger/arc-2.0.0/mro/atac/stages/processing/cell_calling/remove_gel_bead_doublet_barcodes main /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/_JOINT_CELL_DETECTOR/REMOVE_GEL_BEAD_DOUBLET_BARCODES/fork0/chnk04-u45960de6cd /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/_JOINT_CELL_DETECTOR/REMOVE_GEL_BEAD_DOUBLET_BARCODES/fork0/chnk04-u45960de6cd/files /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/journal/SC_ATAC_GEX_COUNTER_CS.SC_ATAC_GEX_COUNTER._JOINT_CELL_DETECTOR.REMOVE_GEL_BEAD_DOUBLET_BARCODES.fork0.chnk04.u45960de6cd 
                              248066    1247     902     1         0    1633         0      40   python /gpfs/share/apps/cellranger/arc-2.0.0/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/cellranger/arc-2.0.0/mro/atac/stages/processing/cell_calling/remove_gel_bead_doublet_barcodes main /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/_JOINT_CELL_DETECTOR/REMOVE_GEL_BEAD_DOUBLET_BARCODES/fork0/chnk04-u45960de6cd /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/_JOINT_CELL_DETECTOR/REMOVE_GEL_BEAD_DOUBLET_BARCODES/fork0/chnk04-u45960de6cd/files /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/journal/SC_ATAC_GEX_COUNTER_CS.SC_ATAC_GEX_COUNTER._JOINT_CELL_DETECTOR.REMOVE_GEL_BEAD_DOUBLET_BARCODES.fork0.chnk04.u45960de6cd 
2021-08-06 21:50:15 [monitor] Stage exceeded its address space quota (using 190.0, allowed 6G)
2021-08-06 21:50:20 [monitor] Process tree:
                                 PID VSZ(mb) RSS(mb) Procs  Read(mb) (calls) Write(mb) (calls) COMMAND
                              248038  193334      10     6         0      97         0      10 /gpfs/share/apps/cellranger/arc-2.0.0/external/martian/bin/mrjob /gpfs/share/apps/cellranger/arc-2.0.0/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/cellranger/arc-2.0.0/mro/atac/stages/processing/cell_calling/remove_gel_bead_doublet_barcodes main /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/_JOINT_CELL_DETECTOR/REMOVE_GEL_BEAD_DOUBLET_BARCODES/fork0/chnk04-u45960de6cd /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/_JOINT_CELL_DETECTOR/REMOVE_GEL_BEAD_DOUBLET_BARCODES/fork0/chnk04-u45960de6cd/files /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/journal/SC_ATAC_GEX_COUNTER_CS.SC_ATAC_GEX_COUNTER._JOINT_CELL_DETECTOR.REMOVE_GEL_BEAD_DOUBLET_BARCODES.fork0.chnk04.u45960de6cd 
                              248066    1247     902     1         0    1998         0      40   python /gpfs/share/apps/cellranger/arc-2.0.0/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/cellranger/arc-2.0.0/mro/atac/stages/processing/cell_calling/remove_gel_bead_doublet_barcodes main /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/_JOINT_CELL_DETECTOR/REMOVE_GEL_BEAD_DOUBLET_BARCODES/fork0/chnk04-u45960de6cd /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/_JOINT_CELL_DETECTOR/REMOVE_GEL_BEAD_DOUBLET_BARCODES/fork0/chnk04-u45960de6cd/files /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/journal/SC_ATAC_GEX_COUNTER_CS.SC_ATAC_GEX_COUNTER._JOINT_CELL_DETECTOR.REMOVE_GEL_BEAD_DOUBLET_BARCODES.fork0.chnk04.u45960de6cd 
2021-08-06 21:50:20 [monitor] Stage exceeded its address space quota (using 190.0, allowed 6G)
2021-08-06 21:50:25 [monitor] Process tree:
                                 PID VSZ(mb) RSS(mb) Procs  Read(mb) (calls) Write(mb) (calls) COMMAND
                              248038  193334      10     6         0     126         0      12 /gpfs/share/apps/cellranger/arc-2.0.0/external/martian/bin/mrjob /gpfs/share/apps/cellranger/arc-2.0.0/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/cellranger/arc-2.0.0/mro/atac/stages/processing/cell_calling/remove_gel_bead_doublet_barcodes main /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/_JOINT_CELL_DETECTOR/REMOVE_GEL_BEAD_DOUBLET_BARCODES/fork0/chnk04-u45960de6cd /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/_JOINT_CELL_DETECTOR/REMOVE_GEL_BEAD_DOUBLET_BARCODES/fork0/chnk04-u45960de6cd/files /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/journal/SC_ATAC_GEX_COUNTER_CS.SC_ATAC_GEX_COUNTER._JOINT_CELL_DETECTOR.REMOVE_GEL_BEAD_DOUBLET_BARCODES.fork0.chnk04.u45960de6cd 
                              248066    1247     902     1         0    2358         0      40   python /gpfs/share/apps/cellranger/arc-2.0.0/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/cellranger/arc-2.0.0/mro/atac/stages/processing/cell_calling/remove_gel_bead_doublet_barcodes main /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/_JOINT_CELL_DETECTOR/REMOVE_GEL_BEAD_DOUBLET_BARCODES/fork0/chnk04-u45960de6cd /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/_JOINT_CELL_DETECTOR/REMOVE_GEL_BEAD_DOUBLET_BARCODES/fork0/chnk04-u45960de6cd/files /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/journal/SC_ATAC_GEX_COUNTER_CS.SC_ATAC_GEX_COUNTER._JOINT_CELL_DETECTOR.REMOVE_GEL_BEAD_DOUBLET_BARCODES.fork0.chnk04.u45960de6cd 
2021-08-06 21:50:25 [monitor] Stage exceeded its address space quota (using 190.0, allowed 6G)
2021-08-06 21:50:30 [monitor] Process tree:
                                 PID VSZ(mb) RSS(mb) Procs  Read(mb) (calls) Write(mb) (calls) COMMAND
                              248038  193334      10     6         0     155         0      14 /gpfs/share/apps/cellranger/arc-2.0.0/external/martian/bin/mrjob /gpfs/share/apps/cellranger/arc-2.0.0/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/cellranger/arc-2.0.0/mro/atac/stages/processing/cell_calling/remove_gel_bead_doublet_barcodes main /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/_JOINT_CELL_DETECTOR/REMOVE_GEL_BEAD_DOUBLET_BARCODES/fork0/chnk04-u45960de6cd /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/_JOINT_CELL_DETECTOR/REMOVE_GEL_BEAD_DOUBLET_BARCODES/fork0/chnk04-u45960de6cd/files /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/journal/SC_ATAC_GEX_COUNTER_CS.SC_ATAC_GEX_COUNTER._JOINT_CELL_DETECTOR.REMOVE_GEL_BEAD_DOUBLET_BARCODES.fork0.chnk04.u45960de6cd 
                              248066    1247     902     1         0    2719         0      40   python /gpfs/share/apps/cellranger/arc-2.0.0/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/cellranger/arc-2.0.0/mro/atac/stages/processing/cell_calling/remove_gel_bead_doublet_barcodes main /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/_JOINT_CELL_DETECTOR/REMOVE_GEL_BEAD_DOUBLET_BARCODES/fork0/chnk04-u45960de6cd /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/_JOINT_CELL_DETECTOR/REMOVE_GEL_BEAD_DOUBLET_BARCODES/fork0/chnk04-u45960de6cd/files /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/journal/SC_ATAC_GEX_COUNTER_CS.SC_ATAC_GEX_COUNTER._JOINT_CELL_DETECTOR.REMOVE_GEL_BEAD_DOUBLET_BARCODES.fork0.chnk04.u45960de6cd 
2021-08-06 21:50:30 [monitor] Stage exceeded its address space quota (using 190.0, allowed 6G)
2021-08-06 21:50:35 [monitor] Process tree:
                                 PID VSZ(mb) RSS(mb) Procs  Read(mb) (calls) Write(mb) (calls) COMMAND
                              248038  193334      10     6         0     184         0      16 /gpfs/share/apps/cellranger/arc-2.0.0/external/martian/bin/mrjob /gpfs/share/apps/cellranger/arc-2.0.0/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/cellranger/arc-2.0.0/mro/atac/stages/processing/cell_calling/remove_gel_bead_doublet_barcodes main /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/_JOINT_CELL_DETECTOR/REMOVE_GEL_BEAD_DOUBLET_BARCODES/fork0/chnk04-u45960de6cd /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/_JOINT_CELL_DETECTOR/REMOVE_GEL_BEAD_DOUBLET_BARCODES/fork0/chnk04-u45960de6cd/files /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/journal/SC_ATAC_GEX_COUNTER_CS.SC_ATAC_GEX_COUNTER._JOINT_CELL_DETECTOR.REMOVE_GEL_BEAD_DOUBLET_BARCODES.fork0.chnk04.u45960de6cd 
                              248066    1247     902     1         0    3080         0      40   python /gpfs/share/apps/cellranger/arc-2.0.0/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/cellranger/arc-2.0.0/mro/atac/stages/processing/cell_calling/remove_gel_bead_doublet_barcodes main /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/_JOINT_CELL_DETECTOR/REMOVE_GEL_BEAD_DOUBLET_BARCODES/fork0/chnk04-u45960de6cd /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/_JOINT_CELL_DETECTOR/REMOVE_GEL_BEAD_DOUBLET_BARCODES/fork0/chnk04-u45960de6cd/files /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/journal/SC_ATAC_GEX_COUNTER_CS.SC_ATAC_GEX_COUNTER._JOINT_CELL_DETECTOR.REMOVE_GEL_BEAD_DOUBLET_BARCODES.fork0.chnk04.u45960de6cd 
2021-08-06 21:50:35 [monitor] Stage exceeded its address space quota (using 190.0, allowed 6G)
2021-08-06 21:50:40 [monitor] Process tree:
                                 PID VSZ(mb) RSS(mb) Procs  Read(mb) (calls) Write(mb) (calls) COMMAND
                              248038  193334      10     6         0     213         0      18 /gpfs/share/apps/cellranger/arc-2.0.0/external/martian/bin/mrjob /gpfs/share/apps/cellranger/arc-2.0.0/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/cellranger/arc-2.0.0/mro/atac/stages/processing/cell_calling/remove_gel_bead_doublet_barcodes main /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/_JOINT_CELL_DETECTOR/REMOVE_GEL_BEAD_DOUBLET_BARCODES/fork0/chnk04-u45960de6cd /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/_JOINT_CELL_DETECTOR/REMOVE_GEL_BEAD_DOUBLET_BARCODES/fork0/chnk04-u45960de6cd/files /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/journal/SC_ATAC_GEX_COUNTER_CS.SC_ATAC_GEX_COUNTER._JOINT_CELL_DETECTOR.REMOVE_GEL_BEAD_DOUBLET_BARCODES.fork0.chnk04.u45960de6cd 
                              248066    1247     902     1         0    3445         0      40   python /gpfs/share/apps/cellranger/arc-2.0.0/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/cellranger/arc-2.0.0/mro/atac/stages/processing/cell_calling/remove_gel_bead_doublet_barcodes main /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/_JOINT_CELL_DETECTOR/REMOVE_GEL_BEAD_DOUBLET_BARCODES/fork0/chnk04-u45960de6cd /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/_JOINT_CELL_DETECTOR/REMOVE_GEL_BEAD_DOUBLET_BARCODES/fork0/chnk04-u45960de6cd/files /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/journal/SC_ATAC_GEX_COUNTER_CS.SC_ATAC_GEX_COUNTER._JOINT_CELL_DETECTOR.REMOVE_GEL_BEAD_DOUBLET_BARCODES.fork0.chnk04.u45960de6cd 
2021-08-06 21:50:40 [monitor] Stage exceeded its address space quota (using 190.0, allowed 6G)
2021-08-06 21:50:45 [monitor] Process tree:
                                 PID VSZ(mb) RSS(mb) Procs  Read(mb) (calls) Write(mb) (calls) COMMAND
                              248038  193334      10     6         0     242         0      20 /gpfs/share/apps/cellranger/arc-2.0.0/external/martian/bin/mrjob /gpfs/share/apps/cellranger/arc-2.0.0/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/cellranger/arc-2.0.0/mro/atac/stages/processing/cell_calling/remove_gel_bead_doublet_barcodes main /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/_JOINT_CELL_DETECTOR/REMOVE_GEL_BEAD_DOUBLET_BARCODES/fork0/chnk04-u45960de6cd /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/_JOINT_CELL_DETECTOR/REMOVE_GEL_BEAD_DOUBLET_BARCODES/fork0/chnk04-u45960de6cd/files /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/journal/SC_ATAC_GEX_COUNTER_CS.SC_ATAC_GEX_COUNTER._JOINT_CELL_DETECTOR.REMOVE_GEL_BEAD_DOUBLET_BARCODES.fork0.chnk04.u45960de6cd 
                              248066    1247     902     1         0    3811         0      40   python /gpfs/share/apps/cellranger/arc-2.0.0/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/cellranger/arc-2.0.0/mro/atac/stages/processing/cell_calling/remove_gel_bead_doublet_barcodes main /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/_JOINT_CELL_DETECTOR/REMOVE_GEL_BEAD_DOUBLET_BARCODES/fork0/chnk04-u45960de6cd /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/_JOINT_CELL_DETECTOR/REMOVE_GEL_BEAD_DOUBLET_BARCODES/fork0/chnk04-u45960de6cd/files /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/journal/SC_ATAC_GEX_COUNTER_CS.SC_ATAC_GEX_COUNTER._JOINT_CELL_DETECTOR.REMOVE_GEL_BEAD_DOUBLET_BARCODES.fork0.chnk04.u45960de6cd 
2021-08-06 21:50:45 [monitor] Stage exceeded its address space quota (using 190.0, allowed 6G)
2021-08-06 21:50:50 [monitor] Process tree:
                                 PID VSZ(mb) RSS(mb) Procs  Read(mb) (calls) Write(mb) (calls) COMMAND
                              248038  193334      10     6         0     271         0      22 /gpfs/share/apps/cellranger/arc-2.0.0/external/martian/bin/mrjob /gpfs/share/apps/cellranger/arc-2.0.0/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/cellranger/arc-2.0.0/mro/atac/stages/processing/cell_calling/remove_gel_bead_doublet_barcodes main /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/_JOINT_CELL_DETECTOR/REMOVE_GEL_BEAD_DOUBLET_BARCODES/fork0/chnk04-u45960de6cd /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/_JOINT_CELL_DETECTOR/REMOVE_GEL_BEAD_DOUBLET_BARCODES/fork0/chnk04-u45960de6cd/files /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/journal/SC_ATAC_GEX_COUNTER_CS.SC_ATAC_GEX_COUNTER._JOINT_CELL_DETECTOR.REMOVE_GEL_BEAD_DOUBLET_BARCODES.fork0.chnk04.u45960de6cd 
                              248066    1247     902     1         0    4168         0      40   python /gpfs/share/apps/cellranger/arc-2.0.0/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/cellranger/arc-2.0.0/mro/atac/stages/processing/cell_calling/remove_gel_bead_doublet_barcodes main /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/_JOINT_CELL_DETECTOR/REMOVE_GEL_BEAD_DOUBLET_BARCODES/fork0/chnk04-u45960de6cd /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/_JOINT_CELL_DETECTOR/REMOVE_GEL_BEAD_DOUBLET_BARCODES/fork0/chnk04-u45960de6cd/files /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/journal/SC_ATAC_GEX_COUNTER_CS.SC_ATAC_GEX_COUNTER._JOINT_CELL_DETECTOR.REMOVE_GEL_BEAD_DOUBLET_BARCODES.fork0.chnk04.u45960de6cd 
2021-08-06 21:50:50 [monitor] Stage exceeded its address space quota (using 190.0, allowed 6G)
2021-08-06 21:50:55 [monitor] Process tree:
                                 PID VSZ(mb) RSS(mb) Procs  Read(mb) (calls) Write(mb) (calls) COMMAND
                              248038  193334      10     6         0     300         0      24 /gpfs/share/apps/cellranger/arc-2.0.0/external/martian/bin/mrjob /gpfs/share/apps/cellranger/arc-2.0.0/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/cellranger/arc-2.0.0/mro/atac/stages/processing/cell_calling/remove_gel_bead_doublet_barcodes main /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/_JOINT_CELL_DETECTOR/REMOVE_GEL_BEAD_DOUBLET_BARCODES/fork0/chnk04-u45960de6cd /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/_JOINT_CELL_DETECTOR/REMOVE_GEL_BEAD_DOUBLET_BARCODES/fork0/chnk04-u45960de6cd/files /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/journal/SC_ATAC_GEX_COUNTER_CS.SC_ATAC_GEX_COUNTER._JOINT_CELL_DETECTOR.REMOVE_GEL_BEAD_DOUBLET_BARCODES.fork0.chnk04.u45960de6cd 
                              248066    1247     902     1         0    4515         0      40   python /gpfs/share/apps/cellranger/arc-2.0.0/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/cellranger/arc-2.0.0/mro/atac/stages/processing/cell_calling/remove_gel_bead_doublet_barcodes main /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/_JOINT_CELL_DETECTOR/REMOVE_GEL_BEAD_DOUBLET_BARCODES/fork0/chnk04-u45960de6cd /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/_JOINT_CELL_DETECTOR/REMOVE_GEL_BEAD_DOUBLET_BARCODES/fork0/chnk04-u45960de6cd/files /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/journal/SC_ATAC_GEX_COUNTER_CS.SC_ATAC_GEX_COUNTER._JOINT_CELL_DETECTOR.REMOVE_GEL_BEAD_DOUBLET_BARCODES.fork0.chnk04.u45960de6cd 
2021-08-06 21:50:55 [monitor] Stage exceeded its address space quota (using 190.0, allowed 6G)
2021-08-06 21:51:00 [monitor] Process tree:
                                 PID VSZ(mb) RSS(mb) Procs  Read(mb) (calls) Write(mb) (calls) COMMAND
                              248038  193334      10     6         0     329         0      26 /gpfs/share/apps/cellranger/arc-2.0.0/external/martian/bin/mrjob /gpfs/share/apps/cellranger/arc-2.0.0/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/cellranger/arc-2.0.0/mro/atac/stages/processing/cell_calling/remove_gel_bead_doublet_barcodes main /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/_JOINT_CELL_DETECTOR/REMOVE_GEL_BEAD_DOUBLET_BARCODES/fork0/chnk04-u45960de6cd /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/_JOINT_CELL_DETECTOR/REMOVE_GEL_BEAD_DOUBLET_BARCODES/fork0/chnk04-u45960de6cd/files /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/journal/SC_ATAC_GEX_COUNTER_CS.SC_ATAC_GEX_COUNTER._JOINT_CELL_DETECTOR.REMOVE_GEL_BEAD_DOUBLET_BARCODES.fork0.chnk04.u45960de6cd 
                              248066    1247     903     1         0    4870         0      40   python /gpfs/share/apps/cellranger/arc-2.0.0/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/cellranger/arc-2.0.0/mro/atac/stages/processing/cell_calling/remove_gel_bead_doublet_barcodes main /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/_JOINT_CELL_DETECTOR/REMOVE_GEL_BEAD_DOUBLET_BARCODES/fork0/chnk04-u45960de6cd /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/_JOINT_CELL_DETECTOR/REMOVE_GEL_BEAD_DOUBLET_BARCODES/fork0/chnk04-u45960de6cd/files /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/journal/SC_ATAC_GEX_COUNTER_CS.SC_ATAC_GEX_COUNTER._JOINT_CELL_DETECTOR.REMOVE_GEL_BEAD_DOUBLET_BARCODES.fork0.chnk04.u45960de6cd 
2021-08-06 21:51:00 [monitor] Stage exceeded its address space quota (using 190.0, allowed 6G)
2021-08-06 21:51:05 [monitor] Process tree:
                                 PID VSZ(mb) RSS(mb) Procs  Read(mb) (calls) Write(mb) (calls) COMMAND
                              248038  193334      10     6         0     358         0      28 /gpfs/share/apps/cellranger/arc-2.0.0/external/martian/bin/mrjob /gpfs/share/apps/cellranger/arc-2.0.0/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/cellranger/arc-2.0.0/mro/atac/stages/processing/cell_calling/remove_gel_bead_doublet_barcodes main /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/_JOINT_CELL_DETECTOR/REMOVE_GEL_BEAD_DOUBLET_BARCODES/fork0/chnk04-u45960de6cd /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/_JOINT_CELL_DETECTOR/REMOVE_GEL_BEAD_DOUBLET_BARCODES/fork0/chnk04-u45960de6cd/files /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/journal/SC_ATAC_GEX_COUNTER_CS.SC_ATAC_GEX_COUNTER._JOINT_CELL_DETECTOR.REMOVE_GEL_BEAD_DOUBLET_BARCODES.fork0.chnk04.u45960de6cd 
                              248066    1247     903     1         0    5229         0      40   python /gpfs/share/apps/cellranger/arc-2.0.0/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/cellranger/arc-2.0.0/mro/atac/stages/processing/cell_calling/remove_gel_bead_doublet_barcodes main /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/_JOINT_CELL_DETECTOR/REMOVE_GEL_BEAD_DOUBLET_BARCODES/fork0/chnk04-u45960de6cd /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/_JOINT_CELL_DETECTOR/REMOVE_GEL_BEAD_DOUBLET_BARCODES/fork0/chnk04-u45960de6cd/files /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/journal/SC_ATAC_GEX_COUNTER_CS.SC_ATAC_GEX_COUNTER._JOINT_CELL_DETECTOR.REMOVE_GEL_BEAD_DOUBLET_BARCODES.fork0.chnk04.u45960de6cd 
2021-08-06 21:51:05 [monitor] Stage exceeded its address space quota (using 190.0, allowed 6G)
2021-08-06 21:51:10 [monitor] Process tree:
                                 PID VSZ(mb) RSS(mb) Procs  Read(mb) (calls) Write(mb) (calls) COMMAND
                              248038  193334      12     6         0     387         0      30 /gpfs/share/apps/cellranger/arc-2.0.0/external/martian/bin/mrjob /gpfs/share/apps/cellranger/arc-2.0.0/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/cellranger/arc-2.0.0/mro/atac/stages/processing/cell_calling/remove_gel_bead_doublet_barcodes main /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/_JOINT_CELL_DETECTOR/REMOVE_GEL_BEAD_DOUBLET_BARCODES/fork0/chnk04-u45960de6cd /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/_JOINT_CELL_DETECTOR/REMOVE_GEL_BEAD_DOUBLET_BARCODES/fork0/chnk04-u45960de6cd/files /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/journal/SC_ATAC_GEX_COUNTER_CS.SC_ATAC_GEX_COUNTER._JOINT_CELL_DETECTOR.REMOVE_GEL_BEAD_DOUBLET_BARCODES.fork0.chnk04.u45960de6cd 
                              248066    1247     903     1         0    5590         0      40   python /gpfs/share/apps/cellranger/arc-2.0.0/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/cellranger/arc-2.0.0/mro/atac/stages/processing/cell_calling/remove_gel_bead_doublet_barcodes main /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/_JOINT_CELL_DETECTOR/REMOVE_GEL_BEAD_DOUBLET_BARCODES/fork0/chnk04-u45960de6cd /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/_JOINT_CELL_DETECTOR/REMOVE_GEL_BEAD_DOUBLET_BARCODES/fork0/chnk04-u45960de6cd/files /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/journal/SC_ATAC_GEX_COUNTER_CS.SC_ATAC_GEX_COUNTER._JOINT_CELL_DETECTOR.REMOVE_GEL_BEAD_DOUBLET_BARCODES.fork0.chnk04.u45960de6cd 
2021-08-06 21:51:10 [monitor] Stage exceeded its address space quota (using 190.0, allowed 6G)
2021-08-06 21:51:15 [monitor] Process tree:
                                 PID VSZ(mb) RSS(mb) Procs  Read(mb) (calls) Write(mb) (calls) COMMAND
                              248038  193334      12     6         0     416         0      32 /gpfs/share/apps/cellranger/arc-2.0.0/external/martian/bin/mrjob /gpfs/share/apps/cellranger/arc-2.0.0/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/cellranger/arc-2.0.0/mro/atac/stages/processing/cell_calling/remove_gel_bead_doublet_barcodes main /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/_JOINT_CELL_DETECTOR/REMOVE_GEL_BEAD_DOUBLET_BARCODES/fork0/chnk04-u45960de6cd /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/_JOINT_CELL_DETECTOR/REMOVE_GEL_BEAD_DOUBLET_BARCODES/fork0/chnk04-u45960de6cd/files /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/journal/SC_ATAC_GEX_COUNTER_CS.SC_ATAC_GEX_COUNTER._JOINT_CELL_DETECTOR.REMOVE_GEL_BEAD_DOUBLET_BARCODES.fork0.chnk04.u45960de6cd 
                              248066    1251     903     1         0    5910         0      41   python /gpfs/share/apps/cellranger/arc-2.0.0/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/cellranger/arc-2.0.0/mro/atac/stages/processing/cell_calling/remove_gel_bead_doublet_barcodes main /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/_JOINT_CELL_DETECTOR/REMOVE_GEL_BEAD_DOUBLET_BARCODES/fork0/chnk04-u45960de6cd /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/_JOINT_CELL_DETECTOR/REMOVE_GEL_BEAD_DOUBLET_BARCODES/fork0/chnk04-u45960de6cd/files /gpfs/data/sequence/results/aifantislab/2021-runs/2021-07-27/cellranger/count-NYU070/journal/SC_ATAC_GEX_COUNTER_CS.SC_ATAC_GEX_COUNTER._JOINT_CELL_DETECTOR.REMOVE_GEL_BEAD_DOUBLET_BARCODES.fork0.chnk04.u45960de6cd 
2021-08-06 21:51:15 [monitor] Stage exceeded its address space quota (using 190.0, allowed 6G)
2021-08-06 21:51:15 [time] __end__
