2021-10-14 15:40:01 [time] __start__
2021-10-14 15:40:01 [monitor] cgroup memory limit of 103079215104 bytes detected
2021-10-14 15:40:06 [monitor] Process tree:
                                 PID VSZ(mb) RSS(mb) Procs  Read(mb) (calls) Write(mb) (calls) COMMAND
                               44049  193334      10     6         0      39         0       6 /gpfs/share/apps/cellranger/6.0.1/external/martian/bin/mrjob /gpfs/share/apps/cellranger/6.0.1/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/cellranger/6.0.1/mro/rna/stages/common/cellranger_preflight main /gpfs/data/sequence/results/aifantislab/2021-runs/2021-09-27/cellranger/count-PAXUGA_Relapse/SC_RNA_COUNTER_CS/CELLRANGER_PREFLIGHT/fork0/chnk0-uac01688791 /gpfs/data/sequence/results/aifantislab/2021-runs/2021-09-27/cellranger/count-PAXUGA_Relapse/SC_RNA_COUNTER_CS/CELLRANGER_PREFLIGHT/fork0/chnk0-uac01688791/files /gpfs/data/sequence/results/aifantislab/2021-runs/2021-09-27/cellranger/count-PAXUGA_Relapse/journal/SC_RNA_COUNTER_CS.CELLRANGER_PREFLIGHT.fork0.chnk0.uac01688791 
                               44062     451      50     1         0     749         0     218   python /gpfs/share/apps/cellranger/6.0.1/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/cellranger/6.0.1/mro/rna/stages/common/cellranger_preflight main /gpfs/data/sequence/results/aifantislab/2021-runs/2021-09-27/cellranger/count-PAXUGA_Relapse/SC_RNA_COUNTER_CS/CELLRANGER_PREFLIGHT/fork0/chnk0-uac01688791 /gpfs/data/sequence/results/aifantislab/2021-runs/2021-09-27/cellranger/count-PAXUGA_Relapse/SC_RNA_COUNTER_CS/CELLRANGER_PREFLIGHT/fork0/chnk0-uac01688791/files /gpfs/data/sequence/results/aifantislab/2021-runs/2021-09-27/cellranger/count-PAXUGA_Relapse/journal/SC_RNA_COUNTER_CS.CELLRANGER_PREFLIGHT.fork0.chnk0.uac01688791 
2021-10-14 15:40:06 [monitor] Stage exceeded its address space quota (using 189.2, allowed 11G)
2021-10-14 15:40:11 [monitor] Process tree:
                                 PID VSZ(mb) RSS(mb) Procs  Read(mb) (calls) Write(mb) (calls) COMMAND
                               44049  231836      10     7         0      74         0       8 /gpfs/share/apps/cellranger/6.0.1/external/martian/bin/mrjob /gpfs/share/apps/cellranger/6.0.1/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/cellranger/6.0.1/mro/rna/stages/common/cellranger_preflight main /gpfs/data/sequence/results/aifantislab/2021-runs/2021-09-27/cellranger/count-PAXUGA_Relapse/SC_RNA_COUNTER_CS/CELLRANGER_PREFLIGHT/fork0/chnk0-uac01688791 /gpfs/data/sequence/results/aifantislab/2021-runs/2021-09-27/cellranger/count-PAXUGA_Relapse/SC_RNA_COUNTER_CS/CELLRANGER_PREFLIGHT/fork0/chnk0-uac01688791/files /gpfs/data/sequence/results/aifantislab/2021-runs/2021-09-27/cellranger/count-PAXUGA_Relapse/journal/SC_RNA_COUNTER_CS.CELLRANGER_PREFLIGHT.fork0.chnk0.uac01688791 
                               44062     496      78     1         0    2354         0     415   python /gpfs/share/apps/cellranger/6.0.1/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/cellranger/6.0.1/mro/rna/stages/common/cellranger_preflight main /gpfs/data/sequence/results/aifantislab/2021-runs/2021-09-27/cellranger/count-PAXUGA_Relapse/SC_RNA_COUNTER_CS/CELLRANGER_PREFLIGHT/fork0/chnk0-uac01688791 /gpfs/data/sequence/results/aifantislab/2021-runs/2021-09-27/cellranger/count-PAXUGA_Relapse/SC_RNA_COUNTER_CS/CELLRANGER_PREFLIGHT/fork0/chnk0-uac01688791/files /gpfs/data/sequence/results/aifantislab/2021-runs/2021-09-27/cellranger/count-PAXUGA_Relapse/journal/SC_RNA_COUNTER_CS.CELLRANGER_PREFLIGHT.fork0.chnk0.uac01688791 
                               44128     130       5     1         0      48         0       0     python -c import h5py; print(h5py.__version__) 
2021-10-14 15:40:11 [monitor] Stage exceeded its address space quota (using 227.0, allowed 11G)
2021-10-14 15:40:12 [time] __end__
