2021-10-14 15:40:01 [time] __start__
2021-10-14 15:40:01 [monitor] cgroup memory limit of 103079215104 bytes detected
2021-10-14 15:40:06 [monitor] Process tree:
                                 PID VSZ(mb) RSS(mb) Procs  Read(mb) (calls) Write(mb) (calls) COMMAND
                               44050  193334      10     6         0      39         0       6 /gpfs/share/apps/cellranger/6.0.1/external/martian/bin/mrjob /gpfs/share/apps/cellranger/6.0.1/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/cellranger/6.0.1/mro/rna/stages/common/cellranger_preflight main /gpfs/data/sequence/results/aifantislab/2021-runs/2021-09-27/cellranger/count-PAXUGA_Relapse/SC_RNA_COUNTER_CS/CELLRANGER_PREFLIGHT_LOCAL/fork0/chnk0-uac01688791 /gpfs/data/sequence/results/aifantislab/2021-runs/2021-09-27/cellranger/count-PAXUGA_Relapse/SC_RNA_COUNTER_CS/CELLRANGER_PREFLIGHT_LOCAL/fork0/chnk0-uac01688791/files /gpfs/data/sequence/results/aifantislab/2021-runs/2021-09-27/cellranger/count-PAXUGA_Relapse/journal/SC_RNA_COUNTER_CS.CELLRANGER_PREFLIGHT_LOCAL.fork0.chnk0.uac01688791 
                               44061     451      50     1         0     748         0     230   python /gpfs/share/apps/cellranger/6.0.1/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/cellranger/6.0.1/mro/rna/stages/common/cellranger_preflight main /gpfs/data/sequence/results/aifantislab/2021-runs/2021-09-27/cellranger/count-PAXUGA_Relapse/SC_RNA_COUNTER_CS/CELLRANGER_PREFLIGHT_LOCAL/fork0/chnk0-uac01688791 /gpfs/data/sequence/results/aifantislab/2021-runs/2021-09-27/cellranger/count-PAXUGA_Relapse/SC_RNA_COUNTER_CS/CELLRANGER_PREFLIGHT_LOCAL/fork0/chnk0-uac01688791/files /gpfs/data/sequence/results/aifantislab/2021-runs/2021-09-27/cellranger/count-PAXUGA_Relapse/journal/SC_RNA_COUNTER_CS.CELLRANGER_PREFLIGHT_LOCAL.fork0.chnk0.uac01688791 
2021-10-14 15:40:06 [monitor] Stage exceeded its address space quota (using 189.2, allowed 11G)
2021-10-14 15:40:11 [monitor] Process tree:
                                 PID VSZ(mb) RSS(mb) Procs  Read(mb) (calls) Write(mb) (calls) COMMAND
                               44050  193334      10     6         0      74         0       8 /gpfs/share/apps/cellranger/6.0.1/external/martian/bin/mrjob /gpfs/share/apps/cellranger/6.0.1/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/cellranger/6.0.1/mro/rna/stages/common/cellranger_preflight main /gpfs/data/sequence/results/aifantislab/2021-runs/2021-09-27/cellranger/count-PAXUGA_Relapse/SC_RNA_COUNTER_CS/CELLRANGER_PREFLIGHT_LOCAL/fork0/chnk0-uac01688791 /gpfs/data/sequence/results/aifantislab/2021-runs/2021-09-27/cellranger/count-PAXUGA_Relapse/SC_RNA_COUNTER_CS/CELLRANGER_PREFLIGHT_LOCAL/fork0/chnk0-uac01688791/files /gpfs/data/sequence/results/aifantislab/2021-runs/2021-09-27/cellranger/count-PAXUGA_Relapse/journal/SC_RNA_COUNTER_CS.CELLRANGER_PREFLIGHT_LOCAL.fork0.chnk0.uac01688791 
                               44061     496      76     1         0    2351         0     430   python /gpfs/share/apps/cellranger/6.0.1/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/cellranger/6.0.1/mro/rna/stages/common/cellranger_preflight main /gpfs/data/sequence/results/aifantislab/2021-runs/2021-09-27/cellranger/count-PAXUGA_Relapse/SC_RNA_COUNTER_CS/CELLRANGER_PREFLIGHT_LOCAL/fork0/chnk0-uac01688791 /gpfs/data/sequence/results/aifantislab/2021-runs/2021-09-27/cellranger/count-PAXUGA_Relapse/SC_RNA_COUNTER_CS/CELLRANGER_PREFLIGHT_LOCAL/fork0/chnk0-uac01688791/files /gpfs/data/sequence/results/aifantislab/2021-runs/2021-09-27/cellranger/count-PAXUGA_Relapse/journal/SC_RNA_COUNTER_CS.CELLRANGER_PREFLIGHT_LOCAL.fork0.chnk0.uac01688791 
                               44129     130       5     1         0      48         0       0     python -c import h5py; print(h5py.__version__) 
2021-10-14 15:40:11 [monitor] Stage exceeded its address space quota (using 189.4, allowed 11G)
2021-10-14 15:40:12 [time] __end__
