2021-10-14 18:14:37 [time] __start__
2021-10-14 18:14:37 [monitor] cgroup memory limit of 103079215104 bytes detected
2021-10-14 18:14:42 [monitor] Process tree:
                                 PID VSZ(mb) RSS(mb) Procs  Read(mb) (calls) Write(mb) (calls) COMMAND
                               55532  231836      10     7         0      45         0       6 /gpfs/share/apps/cellranger/6.0.1/external/martian/bin/mrjob /gpfs/share/apps/cellranger/6.0.1/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/cellranger/6.0.1/mro/rna/stages/analyzer/run_graph_clustering join /gpfs/data/sequence/results/aifantislab/2021-runs/2021-09-27/cellranger/count-PAXUGA_Relapse/SC_RNA_COUNTER_CS/SC_MULTI_CORE/COUNT_ANALYZER/SC_RNA_ANALYZER/RUN_GRAPH_CLUSTERING/fork0/join-uac0168abc4 /gpfs/data/sequence/results/aifantislab/2021-runs/2021-09-27/cellranger/count-PAXUGA_Relapse/SC_RNA_COUNTER_CS/SC_MULTI_CORE/COUNT_ANALYZER/SC_RNA_ANALYZER/RUN_GRAPH_CLUSTERING/fork0/join-uac0168abc4/files /gpfs/data/sequence/results/aifantislab/2021-runs/2021-09-27/cellranger/count-PAXUGA_Relapse/journal/SC_RNA_COUNTER_CS.SC_MULTI_CORE.COUNT_ANALYZER.SC_RNA_ANALYZER.RUN_GRAPH_CLUSTERING.fork0.uac0168abc4 
                               55538     636     192     1         0    2206         0     475   python /gpfs/share/apps/cellranger/6.0.1/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/cellranger/6.0.1/mro/rna/stages/analyzer/run_graph_clustering join /gpfs/data/sequence/results/aifantislab/2021-runs/2021-09-27/cellranger/count-PAXUGA_Relapse/SC_RNA_COUNTER_CS/SC_MULTI_CORE/COUNT_ANALYZER/SC_RNA_ANALYZER/RUN_GRAPH_CLUSTERING/fork0/join-uac0168abc4 /gpfs/data/sequence/results/aifantislab/2021-runs/2021-09-27/cellranger/count-PAXUGA_Relapse/SC_RNA_COUNTER_CS/SC_MULTI_CORE/COUNT_ANALYZER/SC_RNA_ANALYZER/RUN_GRAPH_CLUSTERING/fork0/join-uac0168abc4/files /gpfs/data/sequence/results/aifantislab/2021-runs/2021-09-27/cellranger/count-PAXUGA_Relapse/journal/SC_RNA_COUNTER_CS.SC_MULTI_CORE.COUNT_ANALYZER.SC_RNA_ANALYZER.RUN_GRAPH_CLUSTERING.fork0.uac0168abc4 
                               55557      28      18     1         0     422         0       0     convert -i - -o /gpfs/data/sequence/results/aifantislab/2021-runs/2021-09-27/cellranger/count-PAXUGA_Relapse/SC_RNA_COUNTER_CS/SC_MULTI_CORE/COUNT_ANALYZER/SC_RNA_ANALYZER/RUN_GRAPH_CLUSTERING/fork0/join-uac0168abc4/files/matrix.bin 
2021-10-14 18:14:42 [monitor] Stage exceeded its address space quota (using 227.1, allowed 6G)
2021-10-14 18:14:47 [monitor] Process tree:
                                 PID VSZ(mb) RSS(mb) Procs  Read(mb) (calls) Write(mb) (calls) COMMAND
                               55532  231836      10     7         0      89         0       8 /gpfs/share/apps/cellranger/6.0.1/external/martian/bin/mrjob /gpfs/share/apps/cellranger/6.0.1/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/cellranger/6.0.1/mro/rna/stages/analyzer/run_graph_clustering join /gpfs/data/sequence/results/aifantislab/2021-runs/2021-09-27/cellranger/count-PAXUGA_Relapse/SC_RNA_COUNTER_CS/SC_MULTI_CORE/COUNT_ANALYZER/SC_RNA_ANALYZER/RUN_GRAPH_CLUSTERING/fork0/join-uac0168abc4 /gpfs/data/sequence/results/aifantislab/2021-runs/2021-09-27/cellranger/count-PAXUGA_Relapse/SC_RNA_COUNTER_CS/SC_MULTI_CORE/COUNT_ANALYZER/SC_RNA_ANALYZER/RUN_GRAPH_CLUSTERING/fork0/join-uac0168abc4/files /gpfs/data/sequence/results/aifantislab/2021-runs/2021-09-27/cellranger/count-PAXUGA_Relapse/journal/SC_RNA_COUNTER_CS.SC_MULTI_CORE.COUNT_ANALYZER.SC_RNA_ANALYZER.RUN_GRAPH_CLUSTERING.fork0.uac0168abc4 
                               55538     636     192     1         0    2206         0    8082   python /gpfs/share/apps/cellranger/6.0.1/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/cellranger/6.0.1/mro/rna/stages/analyzer/run_graph_clustering join /gpfs/data/sequence/results/aifantislab/2021-runs/2021-09-27/cellranger/count-PAXUGA_Relapse/SC_RNA_COUNTER_CS/SC_MULTI_CORE/COUNT_ANALYZER/SC_RNA_ANALYZER/RUN_GRAPH_CLUSTERING/fork0/join-uac0168abc4 /gpfs/data/sequence/results/aifantislab/2021-runs/2021-09-27/cellranger/count-PAXUGA_Relapse/SC_RNA_COUNTER_CS/SC_MULTI_CORE/COUNT_ANALYZER/SC_RNA_ANALYZER/RUN_GRAPH_CLUSTERING/fork0/join-uac0168abc4/files /gpfs/data/sequence/results/aifantislab/2021-runs/2021-09-27/cellranger/count-PAXUGA_Relapse/journal/SC_RNA_COUNTER_CS.SC_MULTI_CORE.COUNT_ANALYZER.SC_RNA_ANALYZER.RUN_GRAPH_CLUSTERING.fork0.uac0168abc4 
                               55557     294     261     1         0    8020         0       0     convert -i - -o /gpfs/data/sequence/results/aifantislab/2021-runs/2021-09-27/cellranger/count-PAXUGA_Relapse/SC_RNA_COUNTER_CS/SC_MULTI_CORE/COUNT_ANALYZER/SC_RNA_ANALYZER/RUN_GRAPH_CLUSTERING/fork0/join-uac0168abc4/files/matrix.bin 
2021-10-14 18:14:47 [monitor] Stage exceeded its address space quota (using 227.3, allowed 6G)
2021-10-14 18:14:52 [monitor] Process tree:
                                 PID VSZ(mb) RSS(mb) Procs  Read(mb) (calls) Write(mb) (calls) COMMAND
                               55532  231836      10     7         0     133         0      10 /gpfs/share/apps/cellranger/6.0.1/external/martian/bin/mrjob /gpfs/share/apps/cellranger/6.0.1/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/cellranger/6.0.1/mro/rna/stages/analyzer/run_graph_clustering join /gpfs/data/sequence/results/aifantislab/2021-runs/2021-09-27/cellranger/count-PAXUGA_Relapse/SC_RNA_COUNTER_CS/SC_MULTI_CORE/COUNT_ANALYZER/SC_RNA_ANALYZER/RUN_GRAPH_CLUSTERING/fork0/join-uac0168abc4 /gpfs/data/sequence/results/aifantislab/2021-runs/2021-09-27/cellranger/count-PAXUGA_Relapse/SC_RNA_COUNTER_CS/SC_MULTI_CORE/COUNT_ANALYZER/SC_RNA_ANALYZER/RUN_GRAPH_CLUSTERING/fork0/join-uac0168abc4/files /gpfs/data/sequence/results/aifantislab/2021-runs/2021-09-27/cellranger/count-PAXUGA_Relapse/journal/SC_RNA_COUNTER_CS.SC_MULTI_CORE.COUNT_ANALYZER.SC_RNA_ANALYZER.RUN_GRAPH_CLUSTERING.fork0.uac0168abc4 
                               55538     636     192     1         0    2206         0   15203   python /gpfs/share/apps/cellranger/6.0.1/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/cellranger/6.0.1/mro/rna/stages/analyzer/run_graph_clustering join /gpfs/data/sequence/results/aifantislab/2021-runs/2021-09-27/cellranger/count-PAXUGA_Relapse/SC_RNA_COUNTER_CS/SC_MULTI_CORE/COUNT_ANALYZER/SC_RNA_ANALYZER/RUN_GRAPH_CLUSTERING/fork0/join-uac0168abc4 /gpfs/data/sequence/results/aifantislab/2021-runs/2021-09-27/cellranger/count-PAXUGA_Relapse/SC_RNA_COUNTER_CS/SC_MULTI_CORE/COUNT_ANALYZER/SC_RNA_ANALYZER/RUN_GRAPH_CLUSTERING/fork0/join-uac0168abc4/files /gpfs/data/sequence/results/aifantislab/2021-runs/2021-09-27/cellranger/count-PAXUGA_Relapse/journal/SC_RNA_COUNTER_CS.SC_MULTI_CORE.COUNT_ANALYZER.SC_RNA_ANALYZER.RUN_GRAPH_CLUSTERING.fork0.uac0168abc4 
                               55557     567     481     1         0   15149         0       0     convert -i - -o /gpfs/data/sequence/results/aifantislab/2021-runs/2021-09-27/cellranger/count-PAXUGA_Relapse/SC_RNA_COUNTER_CS/SC_MULTI_CORE/COUNT_ANALYZER/SC_RNA_ANALYZER/RUN_GRAPH_CLUSTERING/fork0/join-uac0168abc4/files/matrix.bin 
2021-10-14 18:14:52 [monitor] Stage exceeded its address space quota (using 227.6, allowed 6G)
2021-10-14 18:14:56 [time] __end__
