Information for 1-GGCACAGAGTCT (Motif 1)

A C T G C T A G A G T C C G T A A T G C G T C A C T A G C G T A A C T G A G C T A G T C A C G T
Reverse Opposite:
C G T A C T A G C T G A G T A C G C A T A G T C A C G T A T C G C G A T A C T G A G T C A G T C
p-value:1e-19
log p-value:-4.521e+01
Information Content per bp:1.814
Number of Target Sequences with motif29.0
Percentage of Target Sequences with motif0.42%
Number of Background Sequences with motif17.9
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets109.8 +/- 43.7bp
Average Position of motif in Background126.1 +/- 44.8bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---GGCACAGAGTCT
CCAGGAACAG-----
 A C G T A C G T A C G T A C T G C T A G A G T C C G T A A T G C G T C A C T A G C G T A A C T G A G C T A G T C A C G T
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T A C G T A C G T

GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GGCACAGAGTCT----
AGNACANNNTGTNCTN
 A C T G C T A G A G T C C G T A A T G C G T C A C T A G C G T A A C T G A G C T A G T C A C G T A C G T A C G T A C G T A C G T
C T G A C T A G T C G A C G T A A G T C C T G A A T C G C G T A T A G C G A C T A C T G A C G T A G C T A G T C G A C T A T G C

POL009.1_DCE_S_II/Jaspar

Match Rank:3
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:GGCACAGAGTCT
--CACAGN----
 A C T G C T A G A G T C C G T A A T G C G T C A C T A G C G T A A C T G A G C T A G T C A C G T
A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T

ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:4
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GGCACAGAGTCT----
AGNACAGNCTGTTCTN
 A C T G C T A G A G T C C G T A A T G C G T C A C T A G C G T A A C T G A G C T A G T C A C G T A C G T A C G T A C G T A C G T
C T G A C T A G T C G A C G T A A T G C C G T A A T C G C G A T T A G C G C A T A T C G G C A T A G C T G A T C G A C T A G C T

HIC2/MA0738.1/Jaspar

Match Rank:5
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----GGCACAGAGTCT
NGTGGGCAT-------
 A C G T A C G T A C G T A C G T A C T G C T A G A G T C C G T A A T G C G T C A C T A G C G T A A C T G A G C T A G T C A C G T
T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Ar/MA0007.3/Jaspar

Match Rank:6
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GGCACAGAGTCT----
GGGAACACGGTGTACCC
 A C G T A C T G C T A G A G T C C G T A A T G C G T C A C T A G C G T A A C T G A G C T A G T C A C G T A C G T A C G T A C G T A C G T
C T A G C T A G C T A G G C T A G T C A T A G C T C G A A G T C T A C G T C A G G A C T A T C G G C A T C G T A G A T C G A T C G A T C

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:7
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GGCACAGAGTCT----
-GVACAGNMTGTYCTB
 A C T G C T A G A G T C C G T A A T G C G T C A C T A G C G T A A C T G A G C T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T C T A G T C G A C G T A T A G C C G T A C A T G C G T A T G A C G C A T T A C G G A C T A G C T G A T C G A C T A C T G

ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---GGCACAGAGTCT-----
YCAGGCWCAGTACCAGGCTC
 A C G T A C G T A C G T A C T G C T A G A G T C C G T A A T G C G T C A C T A G C G T A A C T G A G C T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A G T C T G A C G C T A C T A G C T A G G A T C G C A T A T G C C G T A C T A G C A G T T C G A A T G C A G T C C G T A C A T G C T A G G T A C G A C T A T G C

PB0208.1_Zscan4_2/Jaspar

Match Rank:9
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---GGCACAGAGTCT-
CGAAGCACACAAAATA
 A C G T A C G T A C G T A C T G C T A G A G T C C G T A A T G C G T C A C T A G C G T A A C T G A G C T A G T C A C G T A C G T
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

NR3C2/MA0727.1/Jaspar

Match Rank:10
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GGCACAGAGTCT----
GGGAACACAATGTTCCC
 A C G T A C T G C T A G A G T C C G T A A T G C G T C A C T A G C G T A A C T G A G C T A G T C A C G T A C G T A C G T A C G T A C G T
C A T G C T A G C A T G C G T A T G C A A T G C C T G A G A T C C G T A C T G A G A C T A T C G G A C T G C A T G A T C A G T C G T A C