Information for 17-TTCACAGTTMAT (Motif 21)

C G A T A G C T G A T C G T C A T A G C G C T A C A T G G C A T C A G T G T A C C G T A C A G T
Reverse Opposite:
G T C A C G A T C A T G G T C A C G T A G T A C C G A T A T C G C A G T C T A G T C G A G C T A
p-value:1e-11
log p-value:-2.585e+01
Information Content per bp:1.541
Number of Target Sequences with motif41.0
Percentage of Target Sequences with motif0.60%
Number of Background Sequences with motif71.8
Percentage of Background Sequences with motif0.17%
Average Position of motif in Targets103.2 +/- 53.9bp
Average Position of motif in Background103.3 +/- 57.4bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0170.1_Tgif2/Jaspar

Match Rank:1
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---TTCACAGTTMAT-
GTATTGACAGCTNNTT
 A C G T A C G T A C G T C G A T A G C T G A T C G T C A T A G C G C T A C A T G G C A T C A G T G T A C C G T A C A G T A C G T
A C T G A C G T C G T A C G A T C G A T A C T G C G T A A G T C C T G A C A T G T A G C G A C T T C G A T A C G G C A T C G A T

PH0104.1_Meis2/Jaspar

Match Rank:2
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---TTCACAGTTMAT-
NTATTGACAGGTNNTN
 A C G T A C G T A C G T C G A T A G C T G A T C G T C A T A G C G C T A C A T G G C A T C A G T G T A C C G T A C A G T A C G T
C T A G C A G T G C T A C G A T G A C T C T A G C G T A A G T C C T G A A C T G A T C G G A C T T A G C A G C T G C A T C G A T

PH0102.1_Meis1/Jaspar

Match Rank:3
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---TTCACAGTTMAT-
NTATTGACAGCTNNTT
 A C G T A C G T A C G T C G A T A G C T G A T C G T C A T A G C G C T A C A T G G C A T C A G T G T A C C G T A C A G T A C G T
C T A G A C G T C G T A C G A T A C G T A C T G C G T A A G T C C T G A A C T G A T G C G A C T T A G C A T C G G C A T G C A T

PH0105.1_Meis3/Jaspar

Match Rank:4
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---TTCACAGTTMAT-
GTATTGACAGGTNNTT
 A C G T A C G T A C G T C G A T A G C T G A T C G T C A T A G C G C T A C A T G G C A T C A G T G T A C C G T A C A G T A C G T
C A T G A C G T C G T A C G A T G A C T A C T G C G T A A G T C C T G A C T A G T A C G G A C T T G C A G C T A G A C T G C A T

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:5
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:TTCACAGTTMAT
TTMACACCTT--
 C G A T A G C T G A T C G T C A T A G C G C T A C A T G G C A T C A G T G T A C C G T A C A G T
C A G T G A C T G T A C C T G A A T G C T C G A T A G C G T A C G A C T G A C T A C G T A C G T

PH0140.1_Pknox1/Jaspar

Match Rank:6
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---TTCACAGTTMAT-
GGATTGACAGGTCNTT
 A C G T A C G T A C G T C G A T A G C T G A T C G T C A T A G C G C T A C A T G G C A T C A G T G T A C C G T A C A G T A C G T
A C T G A C T G C G T A C G A T A C G T C T A G C G T A A G T C C T G A A C T G A T C G G A C T T A G C A C G T G A C T G C A T

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:7
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-TTCACAGTTMAT
ATTAACACCT---
 A C G T C G A T A G C T G A T C G T C A T A G C G C T A C A T G G C A T C A G T G T A C C G T A C A G T
G C T A G A C T G A C T T G C A C G T A A G T C C G T A T A G C G A T C G A C T A C G T A C G T A C G T

MYB/MA0100.3/Jaspar

Match Rank:8
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:TTCACAGTTMAT
--NNCAGTTGNN
 C G A T A G C T G A T C G T C A T A G C G C T A C A T G G C A T C A G T G T A C C G T A C A G T
A C G T A C G T C A T G C T G A A G T C T G C A A C T G C G A T G A C T T C A G T C A G C A G T

PB0195.1_Zbtb3_2/Jaspar

Match Rank:9
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---TTCACAGTTMAT-
NNNNTGCCAGTGATTG
 A C G T A C G T A C G T C G A T A G C T G A T C G T C A T A G C G C T A C A T G G C A T C A G T G T A C C G T A C A G T A C G T
G C T A G C A T C G A T G A T C G A C T T C A G T G A C T A G C C G T A A C T G A G C T C A T G C G T A A G C T C G A T T C A G

Tbx21(T-box)/GM12878-TBX21-ChIP-Seq(Encode)/Homer

Match Rank:10
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TTCACAGTTMAT
TTTCACACCT---
 A C G T C G A T A G C T G A T C G T C A T A G C G C T A C A T G G C A T C A G T G T A C C G T A C A G T
A C G T G C A T G A C T T A G C C G T A G A T C C G T A T G A C G A T C G A C T A C G T A C G T A C G T