Information for 18-TGTCAAGCGCAT (Motif 22)

C G A T C T A G A C G T A G T C G T C A C G T A C T A G A G T C A C T G G T A C C G T A A C G T
Reverse Opposite:
C G T A A C G T A C T G G T A C C T A G A G T C A C G T A C G T C T A G C G T A A G T C C G T A
p-value:1e-11
log p-value:-2.550e+01
Information Content per bp:1.875
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.12%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets82.8 +/- 46.9bp
Average Position of motif in Background116.6 +/- 55.8bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Esrra/MA0592.2/Jaspar

Match Rank:1
Score:0.65
Offset:1
Orientation:forward strand
Alignment:TGTCAAGCGCAT
-TTCAAGGTCAT
 C G A T C T A G A C G T A G T C G T C A C G T A C T A G A G T C A C T G G T A C C G T A A C G T
A C G T A C G T G A C T T A G C C T G A C T G A A C T G A C T G A C G T A T G C T C G A G C A T

MEIS3/MA0775.1/Jaspar

Match Rank:2
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--TGTCAAGCGCAT
CCTGTCAA------
 A C G T A C G T C G A T C T A G A C G T A G T C G T C A C G T A C T A G A G T C A C T G G T A C C G T A A C G T
T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A A C G T A C G T A C G T A C G T A C G T A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:3
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TGTCAAGCGCAT
NTGTCAN------
 A C G T C G A T C T A G A C G T A G T C G T C A C G T A C T A G A G T C A C T G G T A C C G T A A C G T
G A T C G A C T C T A G A C G T A T G C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T

ESRRB/MA0141.3/Jaspar

Match Rank:4
Score:0.63
Offset:2
Orientation:forward strand
Alignment:TGTCAAGCGCAT-
--TCAAGGTCATA
 C G A T C T A G A C G T A G T C G T C A C G T A C T A G A G T C A C T G G T A C C G T A A C G T A C G T
A C G T A C G T G A C T T A G C G C T A T C G A T C A G A T C G A G C T G A T C C T G A G C A T G C T A

MEIS2/MA0774.1/Jaspar

Match Rank:5
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TGTCAAGCGCAT
GCTGTCAA------
 A C G T A C G T C G A T C T A G A C G T A G T C G T C A C G T A C T A G A G T C A C T G G T A C C G T A A C G T
A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A A C G T A C G T A C G T A C G T A C G T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:6
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TGTCAAGCGCAT
-BTCAAGGTCA-
 C G A T C T A G A C G T A G T C G T C A C G T A C T A G A G T C A C T G G T A C C G T A A C G T
A C G T A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:7
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TGTCAAGCGCAT
-NTCAAGGTCA-
 C G A T C T A G A C G T A G T C G T C A C G T A C T A G A G T C A C T G G T A C C G T A A C G T
A C G T A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A A C G T

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:8
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TGTCAAGCGCAT
AGGTCAAGGTCA-
 A C G T C G A T C T A G A C G T A G T C G T C A C G T A C T A G A G T C A C T G G T A C C G T A A C G T
C T G A C T A G A C T G G C A T A T G C C G T A C T G A C T A G A C T G A C G T A G T C C T G A A C G T

PH0113.1_Nkx2-4/Jaspar

Match Rank:9
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TGTCAAGCGCAT--
AATTTCAAGTGGCTTN
 A C G T A C G T C G A T C T A G A C G T A G T C G T C A C G T A C T A G A G T C A C T G G T A C C G T A A C G T A C G T A C G T
C T G A C G T A C G A T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G A G T C G C A T G A C T C G T A

Esrrg/MA0643.1/Jaspar

Match Rank:10
Score:0.59
Offset:2
Orientation:forward strand
Alignment:TGTCAAGCGCAT
--TCAAGGTCAT
 C G A T C T A G A C G T A G T C G T C A C G T A C T A G A G T C A C T G G T A C C G T A A C G T
A C G T A C G T G A C T T A G C C T G A T C G A C A T G A T C G C A G T A G T C C T G A G C A T