Information for 13-TGTCCAAGTA (Motif 28)

A C G T A C T G A C G T A G T C A G T C C G T A C G T A A C T G A C G T C G T A
Reverse Opposite:
A C G T C G T A A G T C A C G T A C G T A C T G A C T G C G T A A G T C C G T A
p-value:1e-8
log p-value:-2.009e+01
Information Content per bp:1.530
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.12%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets78.4 +/- 61.1bp
Average Position of motif in Background91.3 +/- 72.6bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:1
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TGTCCAAGTA
ATTTCCAAGAA
 A C G T A C G T A C T G A C G T A G T C A G T C C G T A C G T A A C T G A C G T C G T A
C T G A A G C T A C G T A G C T A G T C G A T C G T C A C T G A A C T G G C T A C T G A

PB0160.1_Rfxdc2_2/Jaspar

Match Rank:2
Score:0.62
Offset:-6
Orientation:reverse strand
Alignment:------TGTCCAAGTA-
NTNNCGTATCCAAGTNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A G T C A G T C C G T A C G T A A C T G A C G T C G T A A C G T
C G T A C G A T G C A T A T G C A T G C C T A G G A C T G T C A C G A T A G T C A G T C C T G A G T C A T A C G A G C T T G C A T A C G

MSX2/MA0708.1/Jaspar

Match Rank:3
Score:0.61
Offset:3
Orientation:forward strand
Alignment:TGTCCAAGTA-
---CCAATTAA
 A C G T A C T G A C G T A G T C A G T C C G T A C G T A A C T G A C G T C G T A A C G T
A C G T A C G T A C G T T A G C G A T C G T C A G T C A A C G T A G C T G T C A T C G A

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:4
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TGTCCAAGTA--------
-TTCNAAGTACTTNNNNN
 A C G T A C T G A C G T A G T C A G T C C G T A C G T A A C T G A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C A G T A C G T A G T C T G A C C T G A C T G A C A T G A G C T T C G A G T A C G A C T G A C T A T C G T A C G G C T A C A T G A G C T

Msx3/MA0709.1/Jaspar

Match Rank:5
Score:0.59
Offset:3
Orientation:forward strand
Alignment:TGTCCAAGTA-
---CCAATTAA
 A C G T A C T G A C G T A G T C A G T C C G T A C G T A A C T G A C G T C G T A A C G T
A C G T A C G T A C G T T A G C G A T C T C G A T G C A A C G T G A C T C G T A T C G A

MSX1/MA0666.1/Jaspar

Match Rank:6
Score:0.59
Offset:3
Orientation:forward strand
Alignment:TGTCCAAGTA-
---CCAATTAG
 A C G T A C T G A C G T A G T C A G T C C G T A C G T A A C T G A C G T C G T A A C G T
A C G T A C G T A C G T A T G C G A T C T G C A G T C A A C G T A C G T T G C A T C A G

STAT3/MA0144.2/Jaspar

Match Rank:7
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TGTCCAAGTA-
TTTCCCAGAAN
 A C G T A C T G A C G T A G T C A G T C C G T A C G T A A C T G A C G T C G T A A C G T
G A C T A C G T A C G T G A T C A G T C G T A C C T G A C T A G T G C A C G T A T C A G

PB0133.1_Hic1_2/Jaspar

Match Rank:8
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----TGTCCAAGTA-
GGGTGTGCCCAAAAGG
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A G T C A G T C C G T A C G T A A C T G A C G T C G T A A C G T
C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G

PH0107.1_Msx2/Jaspar

Match Rank:9
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--TGTCCAAGTA-----
GAAGACCAATTAGCGCT
 A C G T A C G T A C G T A C T G A C G T A G T C A G T C C G T A C G T A A C T G A C G T C G T A A C G T A C G T A C G T A C G T A C G T
T C A G T G C A C T G A T A C G C T G A A T G C G A T C C G T A G T C A C G A T G A C T C T G A C A T G G A T C C A T G G A T C A G C T

RORa(NR)/Liver-Rora-ChIP-Seq(GSE101115)/Homer

Match Rank:10
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----TGTCCAAGTA-
NNHYTGACCTAGWTT
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T A G T C A G T C C G T A C G T A A C T G A C G T C G T A A C G T
A C G T G A T C G A C T G A T C A C G T A C T G T C G A A G T C A G T C A G C T C T G A T C A G C G A T C G A T G C A T