Information for 14-GAGAACGTCT (Motif 29)

A C T G C G T A A C T G C G T A C T G A A G T C A C T G A C G T A G T C A C G T
Reverse Opposite:
C G T A A C T G C G T A A G T C A C T G A G C T A C G T G T A C A C G T A G T C
p-value:1e-8
log p-value:-2.009e+01
Information Content per bp:1.955
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.12%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets76.6 +/- 58.9bp
Average Position of motif in Background80.2 +/- 66.8bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GAGAACGTCT--
--VBSYGTCTGG
 A C T G C G T A A C T G C G T A C T G A A G T C A C T G A C G T A G T C A C G T A C G T A C G T
A C G T A C G T T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G

HIF1A/MA1106.1/Jaspar

Match Rank:2
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GAGAACGTCT
NNGCACGTNC
 A C T G C G T A A C T G C G T A C T G A A G T C A C T G A C G T A G T C A C G T
T A C G T A C G C A T G A G T C T C G A A G T C C T A G G A C T T C G A A T G C

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:3
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:GAGAACGTCT
----ACGTCA
 A C T G C G T A A C T G C G T A C T G A A G T C A C T G A C G T A G T C A C G T
A C G T A C G T A C G T A C G T C T G A A G T C T C A G A C G T G T A C C G T A

PRDM1/MA0508.2/Jaspar

Match Rank:4
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GAGAACGTCT
GTGAAAGTGA
 A C T G C G T A A C T G C G T A C T G A A G T C A C T G A C G T A G T C A C G T
C T A G C G A T A C T G C G T A G C T A G T C A C T A G A G C T C T A G C G T A

PROX1/MA0794.1/Jaspar

Match Rank:5
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GAGAACGTCT--
CAAGACGCCTTA
 A C T G C G T A A C T G C G T A C T G A A G T C A C T G A C G T A G T C A C G T A C G T A C G T
A G T C C T G A G C T A C T A G T C G A G A T C C A T G G A T C A G T C C A G T A G C T T C G A

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----GAGAACGTCT
GAAAGTGAAAGT--
 A C G T A C G T A C G T A C G T A C T G C G T A A C T G C G T A C T G A A G T C A C T G A C G T A G T C A C G T
T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.56
Offset:4
Orientation:forward strand
Alignment:GAGAACGTCT--
----CTGTCTGG
 A C T G C G T A A C T G C G T A C T G A A G T C A C T G A C G T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G

ZBTB18/MA0698.1/Jaspar

Match Rank:8
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:GAGAACGTCT-----
--NAACATCTGGATN
 A C T G C G T A A C T G C G T A C T G A A G T C A C T G A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T C A G G T C A C T G A A G T C T G C A C A G T T A G C G C A T C A T G A C T G T G C A G C A T C A T G

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:9
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:GAGAACGTCT
--GCACGTAY
 A C T G C G T A A C T G C G T A C T G A A G T C A C T G A C G T A G T C A C G T
A C G T A C G T C A T G T A G C C T G A G A T C C T A G G A C T G T C A A G C T

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:10
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GAGAACGTCT
-BGCACGTA-
 A C T G C G T A A C T G C G T A C T G A A G T C A C T G A C G T A G T C A C G T
A C G T A T C G C A T G A G T C C T G A T A G C C T A G A G C T T G C A A C G T