Information for 3-GGGGTATATTAG (Motif 3)

A C T G A C T G C A T G C T A G A C G T C G T A C A G T C T G A A C G T A C G T C G T A A C T G
Reverse Opposite:
G T A C A C G T C G T A C G T A A G C T G C T A A C G T G T C A A G T C G A T C A G T C A G T C
p-value:1e-16
log p-value:-3.794e+01
Information Content per bp:1.876
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif0.16%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets84.6 +/- 55.0bp
Average Position of motif in Background62.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RELB/MA1117.1/Jaspar

Match Rank:1
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GGGGTATATTAG
NNGGGGAATNC---
 A C G T A C G T A C T G A C T G C A T G C T A G A C G T C G T A C A G T C T G A A C G T A C G T C G T A A C T G
A T G C G T A C A T C G C A T G C A T G C T A G C T G A G C T A G C A T G A C T G A T C A C G T A C G T A C G T

PB0156.1_Plagl1_2/Jaspar

Match Rank:2
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----GGGGTATATTAG
GCTGGGGGGTACCCCTT
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G C A T G C T A G A C G T C G T A C A G T C T G A A C G T A C G T C G T A A C T G
C T A G A G T C G C A T C T A G C A T G A C T G C T A G A C T G A C T G A C G T C T G A G A T C G T A C G T A C G A T C G A C T C G A T

PB0201.1_Zfp281_2/Jaspar

Match Rank:3
Score:0.54
Offset:-7
Orientation:reverse strand
Alignment:-------GGGGTATATTAG
NNNATTGGGGGTNTCCT--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G C A T G C T A G A C G T C G T A C A G T C T G A A C G T A C G T C G T A A C T G
A G T C G C T A G C T A G C T A C G A T C G A T A C T G A C T G A C T G C A T G A C T G A G C T G T A C G C A T G T A C G T A C G C A T A C G T A C G T

PB0143.1_Klf7_2/Jaspar

Match Rank:4
Score:0.54
Offset:-6
Orientation:reverse strand
Alignment:------GGGGTATATTAG
NNNTNGGGCGTATNNTN-
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G C A T G C T A G A C G T C G T A C A G T C T G A A C G T A C G T C G T A A C T G
G T C A C G T A A C T G G C A T C A G T C T A G A C T G A C T G G A T C C T A G A C G T G C T A G C A T T C A G G A T C A G C T A C G T A C G T

PB0163.1_Six6_2/Jaspar

Match Rank:5
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---GGGGTATATTAG--
ANNNGGATATATCCNNN
 A C G T A C G T A C G T A C T G A C T G C A T G C T A G A C G T C G T A C A G T C T G A A C G T A C G T C G T A A C T G A C G T A C G T
G T C A C T A G C T A G A G T C T C A G C A T G T C G A A C G T T G C A A G C T C T G A A G C T T G A C A T G C T A G C G C T A A C G T

GSC/MA0648.1/Jaspar

Match Rank:6
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:GGGGTATATTAG-
---NNGGATTAGN
 A C T G A C T G C A T G C T A G A C G T C G T A C A G T C T G A A C G T A C G T C G T A A C T G A C G T
A C G T A C G T A C G T C T A G T A C G T C A G T C A G T G C A A C G T G A C T C T G A C T A G A T G C

HOXA13/MA0650.1/Jaspar

Match Rank:7
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:GGGGTATATTAG
--TTTTTATTGG
 A C T G A C T G C A T G C T A G A C G T C G T A C A G T C T G A A C G T A C G T C G T A A C T G
A C G T A C G T C A G T A C G T A C G T C G A T C G A T C G T A C G A T C A G T T C A G A T C G

GFY(?)/Promoter/Homer

Match Rank:8
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:GGGGTATATTAG-
-GGGAATTGTAGT
 A C T G A C T G C A T G C T A G A C G T C G T A C A G T C T G A A C G T A C G T C G T A A C T G A C G T
A C G T C A T G T C A G T C A G T C G A T C G A G C A T A C G T A C T G A C G T C T G A A T C G A C G T

GSC2/MA0891.1/Jaspar

Match Rank:9
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:GGGGTATATTAG-
---GNGGATTAGN
 A C T G A C T G C A T G C T A G A C G T C G T A C A G T C T G A A C G T A C G T C G T A A C T G A C G T
A C G T A C G T A C G T C T A G T A G C T C A G C A T G T G C A C G A T C G A T C G T A C T A G A C T G

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:10
Score:0.52
Offset:4
Orientation:forward strand
Alignment:GGGGTATATTAG
----RGGATTAR
 A C T G A C T G C A T G C T A G A C G T C G T A C A G T C T G A A C G T A C G T C G T A A C T G
A C G T A C G T A C G T A C G T T C A G C T A G C T A G T G C A C G A T C G A T C G T A C T A G