Information for 16-TGGGTCAGTA (Motif 31)

A C G T A C T G A C T G A C T G A C G T A G T C C G T A A C T G A C G T C G T A
Reverse Opposite:
A C G T C G T A A G T C A C G T A C T G C G T A A G T C A G T C A G T C C G T A
p-value:1e-7
log p-value:-1.817e+01
Information Content per bp:1.530
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif0.15%
Number of Background Sequences with motif5.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets90.8 +/- 51.1bp
Average Position of motif in Background132.6 +/- 49.2bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:1
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:TGGGTCAGTA
TGAGTCAGCA
 A C G T A C T G A C T G A C T G A C G T A G T C C G T A A C T G A C G T C G T A
G A C T T A C G C G T A T A C G G A C T G T A C G C T A C T A G A G T C C T G A

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:2
Score:0.71
Offset:1
Orientation:forward strand
Alignment:TGGGTCAGTA
-AGGTCA---
 A C G T A C T G A C T G A C T G A C G T A G T C C G T A A C T G A C G T C G T A
A C G T C T G A C A T G C A T G C G A T G T A C T G C A A C G T A C G T A C G T

RORa(NR)/Liver-Rora-ChIP-Seq(GSE101115)/Homer

Match Rank:3
Score:0.70
Offset:-4
Orientation:forward strand
Alignment:----TGGGTCAGTA-
AAWCTAGGTCARDNN
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G A C G T A G T C C G T A A C T G A C G T C G T A A C G T
C G T A C G T A C G T A A G T C A G C T C T G A A C T G A C T G A G C T A G T C C G T A C T A G C T A G C T A G T G C A

NR1H4/MA1110.1/Jaspar

Match Rank:4
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:TGGGTCAGTA-
NAGGTCATTGA
 A C G T A C T G A C T G A C T G A C G T A G T C C G T A A C T G A C G T C G T A A C G T
C G A T T C G A C A T G C A T G A C G T G A T C T C G A A G C T G C A T T C A G T G C A

PB0153.1_Nr2f2_2/Jaspar

Match Rank:5
Score:0.68
Offset:-5
Orientation:forward strand
Alignment:-----TGGGTCAGTA-
CGCGCCGGGTCACGTA
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G A C G T A G T C C G T A A C T G A C G T C G T A A C G T
T A G C A C T G T G A C A C T G A G T C A T G C C T A G A C T G A C T G A C G T A G T C C T G A T A G C A C T G A G C T G C T A

RORg(NR)/Liver-Rorc-ChIP-Seq(GSE101115)/Homer

Match Rank:6
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----TGGGTCAGTA
WAABTAGGTCAV--
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G A C G T A G T C C G T A A C T G A C G T C G T A
C G T A C G T A C G T A A G T C A G C T C T G A A C T G C T A G A G C T A G T C C G T A T C A G A C G T A C G T

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:7
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---TGGGTCAGTA
AAYTAGGTCA---
 A C G T A C G T A C G T A C G T A C T G A C T G A C T G A C G T A G T C C G T A A C T G A C G T C G T A
G C T A C G T A A G T C A C G T T C G A T A C G A C T G A G C T A G T C T C G A A C G T A C G T A C G T

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:8
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---TGGGTCAGTA
AAYTAGGTCA---
 A C G T A C G T A C G T A C G T A C T G A C T G A C T G A C G T A G T C C G T A A C T G A C G T C G T A
G C T A C G T A A G T C A C G T T C G A T A C G A C T G A G C T A G T C T C G A A C G T A C G T A C G T

RORC/MA1151.1/Jaspar

Match Rank:9
Score:0.66
Offset:-5
Orientation:forward strand
Alignment:-----TGGGTCAGTA
ATAAGTAGGTCA---
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G A C G T A G T C C G T A A C T G A C G T C G T A
C T G A C G A T G C T A C G T A A C T G A C G T T C G A C A T G C T A G A C G T A G T C C T G A A C G T A C G T A C G T

RORA(var.2)/MA0072.1/Jaspar

Match Rank:10
Score:0.66
Offset:-6
Orientation:forward strand
Alignment:------TGGGTCAGTA
TATAAGTAGGTCAA--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G A C G T A G T C C G T A A C T G A C G T C G T A
C G A T C G T A C G A T G T C A C G T A A T C G A C G T C T G A A C T G A C T G A C G T A G T C C G T A T C G A A C G T A C G T