Information for 18-ACTTTTACTA (Motif 33)

C G T A A T G C A C G T A C G T A C G T A G C T C G T A A G T C C G A T C T G A
Reverse Opposite:
A G C T G C T A C T A G C G A T C T G A G T C A C G T A G T C A A T C G C G A T
p-value:1e-7
log p-value:-1.780e+01
Information Content per bp:1.839
Number of Target Sequences with motif63.0
Percentage of Target Sequences with motif0.92%
Number of Background Sequences with motif181.7
Percentage of Background Sequences with motif0.42%
Average Position of motif in Targets86.1 +/- 56.3bp
Average Position of motif in Background99.4 +/- 56.3bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hoxa11/MA0911.1/Jaspar

Match Rank:1
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:ACTTTTACTA--
ANTTTTACGACC
 C G T A A T G C A C G T A C G T A C G T A G C T C G T A A G T C C G A T C T G A A C G T A C G T
G C T A C G T A C G A T C G A T G C A T G C A T G C T A G A T C C T A G T C G A A G T C G A T C

HOXC12/MA0906.1/Jaspar

Match Rank:2
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:ACTTTTACTA--
-NTTTTACGACC
 C G T A A T G C A C G T A C G T A C G T A G C T C G T A A G T C C G A T C T G A A C G T A C G T
A C G T C G A T C A G T C G A T G C A T C G A T T C G A A G T C C A T G C T G A A G T C G A T C

HOXD11/MA0908.1/Jaspar

Match Rank:3
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:ACTTTTACTA-
-NTTTTACGAC
 C G T A A T G C A C G T A C G T A C G T A G C T C G T A A G T C C G A T C T G A A C G T
A C G T C G A T C G A T C G A T C G A T C G A T C G T A A G T C C T A G C G T A A G T C

MYNN(Zf)/HEK293-MYNN.eGFP-ChIP-Seq(Encode)/Homer

Match Rank:4
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-ACTTTTACTA----
GACTTTTAWTTTGAA
 A C G T C G T A A T G C A C G T A C G T A C G T A G C T C G T A A G T C C G A T C T G A A C G T A C G T A C G T A C G T
C T A G C T G A A G T C G A C T G A C T G A C T A C G T C T G A G C A T C A G T G A C T C G A T T C A G C T G A G T C A

HOXC13/MA0907.1/Jaspar

Match Rank:5
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:ACTTTTACTA--
-NTTTTACGAGN
 C G T A A T G C A C G T A C G T A C G T A G C T C G T A A G T C C G A T C T G A A C G T A C G T
A C G T C G A T C G A T C G A T C G A T G C A T G T C A A G T C C T A G T C G A A T C G T G A C

HOXC11/MA0651.1/Jaspar

Match Rank:6
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:ACTTTTACTA--
-NTTTTACGACC
 C G T A A T G C A C G T A C G T A C G T A G C T C G T A A G T C C G A T C T G A A C G T A C G T
A C G T C G T A C G A T C A G T C G A T G C A T C G T A A G T C C T A G C T G A A G T C G A T C

HOXD12/MA0873.1/Jaspar

Match Rank:7
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:ACTTTTACTA--
-NTTTTACGACT
 C G T A A T G C A C G T A C G T A C G T A G C T C G T A A G T C C G A T C T G A A C G T A C G T
A C G T C A G T C G A T G C A T A G C T G C A T C T G A A G T C A T C G T C G A A G T C A G C T

Hoxa13(Homeobox)/ChickenMSG-Hoxa13.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:8
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:ACTTTTACTA-
-NTTTTATDRG
 C G T A A T G C A C G T A C G T A C G T A G C T C G T A A G T C C G A T C T G A A C G T
A C G T C T A G G C A T A C G T G C A T G A C T C G T A G A C T C A T G C T A G A T C G

PH0048.1_Hoxa13/Jaspar

Match Rank:9
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-ACTTTTACTA-----
ANATTTTACGAGNNNN
 A C G T C G T A A T G C A C G T A C G T A C G T A G C T C G T A A G T C C G A T C T G A A C G T A C G T A C G T A C G T A C G T
G C T A T C G A C G T A C G A T C A G T C G A T C G A T C T G A A G T C C T A G C T G A A T C G T A C G C G A T G C A T C G A T

HOXC10/MA0905.1/Jaspar

Match Rank:10
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:ACTTTTACTA-
-NTTTTACGAC
 C G T A A T G C A C G T A C G T A C G T A G C T C G T A A G T C C G A T C T G A A C G T
A C G T C G T A C G A T G C A T G C A T C G A T C G T A G A T C C A T G C T G A A G T C