Information for 24-GTGGACTCGG (Motif 42)

A C T G A C G T A C T G A C T G C G T A A G T C A C G T A G T C A C T G A C T G
Reverse Opposite:
A G T C A G T C A C T G C G T A A C T G A C G T A G T C A G T C C G T A A G T C
p-value:1e-2
log p-value:-5.479e+00
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.04%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets78.9 +/- 62.4bp
Average Position of motif in Background67.6 +/- 64.8bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)2.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---GTGGACTCGG
NNTGTGGATTSS-
 A C G T A C G T A C G T A C T G A C G T A C T G A C T G C G T A A G T C A C G T A G T C A C T G A C T G
C A T G G A C T G C A T A C T G A G C T A C T G A C T G C G T A G C A T A G C T A T C G T A C G A C G T

ZNF354C/MA0130.1/Jaspar

Match Rank:2
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:GTGGACTCGG
GTGGAT----
 A C T G A C G T A C T G A C T G C G T A A G T C A C G T A G T C A C T G A C T G
A T C G A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T

FOXH1/MA0479.1/Jaspar

Match Rank:3
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-GTGGACTCGG
TGTGGATTNNN
 A C G T A C T G A C G T A C T G A C T G C G T A A G T C A C G T A G T C A C T G A C T G
C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A

PB0134.1_Hnf4a_2/Jaspar

Match Rank:4
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---GTGGACTCGG---
NNATTGGACTTTNGNN
 A C G T A C G T A C G T A C T G A C G T A C T G A C T G C G T A A G T C A C G T A G T C A C T G A C T G A C G T A C G T A C G T
C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C

PB0200.1_Zfp187_2/Jaspar

Match Rank:5
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GTGGACTCGG----
NNAGGGACAAGGGCNC
 A C G T A C G T A C T G A C G T A C T G A C T G C G T A A G T C A C G T A G T C A C T G A C T G A C G T A C G T A C G T A C G T
A G C T C G A T C T G A C A T G C T A G C T A G C G T A A G T C T C G A C T G A C T A G C T A G C A T G A G T C G A C T G T A C

VDR/MA0693.2/Jaspar

Match Rank:6
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GTGGACTCGG
-TGAACTCA-
 A C T G A C G T A C T G A C T G C G T A A G T C A C G T A G T C A C T G A C T G
A C G T A G C T C T A G G T C A T G C A T G A C G A C T A G T C C T G A A C G T

HINFP/MA0131.2/Jaspar

Match Rank:7
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GTGGACTCGG
NCGCGGACGTTG
 A C G T A C G T A C T G A C G T A C T G A C T G C G T A A G T C A C G T A G T C A C T G A C T G
T G A C G T A C T A C G T A G C C T A G A T C G C G T A T A G C T A C G A G C T A C G T T A C G

PB0044.1_Mtf1_1/Jaspar

Match Rank:8
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---GTGGACTCGG---
NNTTTGCACACGGCCC
 A C G T A C G T A C G T A C T G A C G T A C T G A C T G C G T A A G T C A C G T A G T C A C T G A C T G A C G T A C G T A C G T
C G A T G A C T C A G T A C G T G A C T A C T G G A T C C T G A A G T C G C T A G A T C A C T G C T A G G A T C T A G C G T A C

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GTGGACTCGG
CTGACCTTTG
 A C T G A C G T A C T G A C T G C G T A A G T C A C G T A G T C A C T G A C T G
A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G

RARa(NR)/K562-RARa-ChIP-Seq(Encode)/Homer

Match Rank:10
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GTGGACTCGG
TTGAMCTTTG
 A C T G A C G T A C T G A C T G C G T A A G T C A C G T A G T C A C T G A C T G
A G C T A G C T C A T G C T G A G T A C A G T C A G C T A G C T C A G T C T A G