Information for 5-CCACTAGGTGGC (Motif 5)

T G A C G A T C C G T A A G T C G A C T G C T A C T A G T A C G C A G T C T A G A C T G T A G C
Reverse Opposite:
A C T G T G A C G A T C G T C A A G T C G A T C C G A T C T G A T C A G G A C T C T A G A C T G
p-value:1e-15
log p-value:-3.637e+01
Information Content per bp:1.705
Number of Target Sequences with motif58.0
Percentage of Target Sequences with motif0.85%
Number of Background Sequences with motif99.2
Percentage of Background Sequences with motif0.23%
Average Position of motif in Targets90.7 +/- 57.5bp
Average Position of motif in Background101.8 +/- 51.5bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:1
Score:0.85
Offset:-3
Orientation:reverse strand
Alignment:---CCACTAGGTGGC-----
TGGCCACCAGGTGGCACTNT
 A C G T A C G T A C G T T G A C G A T C C G T A A G T C G A C T G C T A C T A G T A C G C A G T C T A G A C T G T A G C A C G T A C G T A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.84
Offset:-3
Orientation:forward strand
Alignment:---CCACTAGGTGGC----
TGGCCACCAGGGGGCGCTA
 A C G T A C G T A C G T T G A C G A T C C G T A A G T C G A C T G C T A C T A G T A C G C A G T C T A G A C T G T A G C A C G T A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.82
Offset:-1
Orientation:reverse strand
Alignment:-CCACTAGGTGGC-------
GCCASCAGGGGGCGCYVNNG
 A C G T T G A C G A T C C G T A A G T C G A C T G C T A C T A G T A C G C A G T C T A G A C T G T A G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

CTCFL/MA1102.1/Jaspar

Match Rank:4
Score:0.71
Offset:1
Orientation:forward strand
Alignment:CCACTAGGTGGC---
-CACCAGGGGGCACC
 T G A C G A T C C G T A A G T C G A C T G C T A C T A G T A C G C A G T C T A G A C T G T A G C A C G T A C G T A C G T
A C G T T A G C T C G A T A G C A G T C T G C A T A C G T C A G A C T G T A C G A C T G G T A C T C G A A T G C A G T C

GLIS3(Zf)/Thyroid-Glis3.GFP-ChIP-Seq(GSE103297)/Homer

Match Rank:5
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CCACTAGGTGGC--
CTCCCTGGGAGGCCN
 A C G T T G A C G A T C C G T A A G T C G A C T G C T A C T A G T A C G C A G T C T A G A C T G T A G C A C G T A C G T
T A G C G C A T A G T C G A T C A T G C G A C T C T A G A C T G A C T G C T G A A C T G C T A G A G T C T G A C C G A T

Znf423/MA0116.1/Jaspar

Match Rank:6
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---CCACTAGGTGGC
GCACCCCTGGGTGCC
 A C G T A C G T A C G T T G A C G A T C C G T A A G T C G A C T G C T A C T A G T A C G C A G T C T A G A C T G T A G C
A C T G T G A C G T C A G T A C A G T C A G T C G A T C C G A T C T A G A C T G A C T G A C G T A C T G A T G C A G T C

SCRT1/MA0743.1/Jaspar

Match Rank:7
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CCACTAGGTGGC-
GAGCAACAGGTGGTT
 A C G T A C G T T G A C G A T C C G T A A G T C G A C T G C T A C T A G T A C G C A G T C T A G A C T G T A G C A C G T
T C A G G C T A A C T G G A T C G T C A C G T A G T A C C G T A C T A G A C T G A G C T C A T G A C T G A G C T G A C T

SCRT2/MA0744.1/Jaspar

Match Rank:8
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CCACTAGGTGGC
ATGCAACAGGTGG-
 A C G T A C G T T G A C G A T C C G T A A G T C G A C T G C T A C T A G T A C G C A G T C T A G A C T G T A G C
T C G A G C A T A C T G G T A C T G C A C G T A G T A C G T C A T C A G A T C G G C A T C A T G A T C G A C G T

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:9
Score:0.59
Offset:5
Orientation:forward strand
Alignment:CCACTAGGTGGC-
-----AGGTGTCA
 T G A C G A T C C G T A A G T C G A C T G C T A C T A G T A C G C A G T C T A G A C T G T A G C A C G T
A C G T A C G T A C G T A C G T A C G T C T G A C T A G A T C G A G C T A C T G G A C T A G T C C T G A

SCRT1(Zf)/HEK293-SCRT1.eGFP-ChIP-Seq(Encode)/Homer

Match Rank:10
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CCACTAGGTGGC
GCAACAGGTG--
 T G A C G A T C C G T A A G T C G A C T G C T A C T A G T A C G C A G T C T A G A C T G T A G C
A C T G A G T C G T C A C G T A A G T C C G T A C T A G C T A G G A C T C A T G A C G T A C G T