cmd = /gpfs/data/aifantislab/home/zhouh05/genomics/dimitris/chromnitron/motif_analysis/KG1_anchors/KG1_anchors.bed hg19 /gpfs/data/aifantislab/home/zhouh05/genomics/dimitris/chromnitron/motif_analysis/KG1_anchors/homer_results -size 200 -mask -p 8 -preparsedDir /gpfs/data/aifantislab/home/zhouh05/genomics/dimitris/chromnitron/motif_analysis/KG1_anchors/preparsed