Nextflow workflow report

[festering_volta] (resumed run)

Workflow execution completed successfully!
Run times
16-Nov-2023 11:48:23 - 16-Nov-2023 22:17:07 (duration: 10h 28m 44s)
  2750 succeeded  
  0 cached  
  0 ignored  
  0 failed  
Nextflow command
nextflow run epi2me-labs/wf-pore-c -c nyu_ultraviolet.config -profile standard --cutter DpnII --ref genome/genome.fa --fastq fastq/fastq_pass --sample CUTLL1 --out_dir results --chromunity --coverage --threads 8 --mcool --hi_c --pairs -resume
CPU-Hours
561.3
Launch directory
/gpfs/data/aifantislab/home/zhouh05/genomics/giovanni/hic_202311_hg38
Work directory
/gpfs/data/aifantislab/home/zhouh05/genomics/giovanni/hic_202311_hg38/work
Project directory
/gpfs/home/zhouh05/.nextflow/assets/epi2me-labs/wf-pore-c
Script name
main.nf
Script ID
624c56d9e58c059aeaf6685254e996e1
Workflow session
dd778c8d-42cc-4244-92c0-c3754f24f482
Workflow repository
https://github.com/epi2me-labs/wf-pore-c, revision master (commit hash 5f8abc1042f757aa642413a0248434190212eff0)
Workflow profile
standard
Nextflow version
version 23.04.4, build 5881 (25-09-2023 15:34 UTC)

Resource Usage

These plots give an overview of the distribution of resource usage for each process.

CPU

Memory

Job Duration

I/O

Tasks

This table shows information about each task in the workflow. Use the search box on the right to filter rows for specific values. Clicking headers will sort the table by that value and scrolling side to side will reveal more columns.

(tasks table omitted because the dataset is too big)