FastQCFastQC Report
Thu 24 Nov 2022
BS18831A.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameBS18831A.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13132522
Sequences flagged as poor quality0
Sequence length39
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACCGCTCA233420.17774194476887226TruSeq Adapter, Index 2 (97% over 37bp)

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.7)