FastQCFastQC Report
Thu 24 Nov 2022
BS18845A.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameBS18845A.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13090064
Sequences flagged as poor quality0
Sequence length39
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GATAGACAGCTGCTGAACCAATGGGACCAAGCTTCACAC3438622.626893191660484No Hit
AGACAGCTGCTGAACCAATGGGACCAAGCTTCACACCGA388690.2969351410352157No Hit
ATACGCGGCCGCCGAAACGCGTATCGCGCGCATAATAGC323350.2470194186980293No Hit
CAAGGTCGCTGTTCAATACATCGGACGCATATCGCGTCG242170.1850029151881916No Hit
CAAGGTCGCTGTTCAATACATCGGACGCGAAATTCGTAT225840.1725278042949217No Hit
ATGTGTTCGACCCTATACGCGGCCGCCGAAACGCGTATC212360.16222991728688263No Hit
CAAGGTCGCTGTTCAATACATCGGAACGATTCGACGATC209540.16007561154781214No Hit
CAAGGTCGCTGTTCAATACATCGGATTATCGCGTCGCGA204210.15600382091332785No Hit
CAAGGTCGCTGTTCAATACATCGGACGATAGTCGCGTCG199990.15278000168677555No Hit
CAAGGTCGCTGTTCAATACATCGGATTCGCGCGTAACGA197770.15108405887091156No Hit
ATAGACAGCTGCTGAACCAATGGGACCAAGCTTCACACC195980.14971660948334553No Hit
CAAGGTCGCTGTTCAATACATCGGACGCGATACGACCGC195910.14966313380897145No Hit
CAAGGTCGCTGTTCAATACATCGGACCGCGATACGACTC193990.1481963724547107No Hit
CAAGGTCGCTGTTCAATACATCGGATATCGCGCGAAACG191340.14617193621054872No Hit
CAAGGTCGCTGTTCAATACATCGGACGATACGCGTTGGT190410.14546147367957865No Hit
CAAGGTCGCTGTTCAATACATCGGACCGTACGTCGTGTC188350.1438877609765697No Hit
CAAGGTCGCTGTTCAATACATCGGACGCCGATTACGTGT183750.14037364523198664No Hit
CAAGGTCGCTGTTCAATACATCGGACCGCGCGTAATGCG179430.13707343218489995No Hit
CAAGGTCGCTGTTCAATACATCGGACGATACGCCGATCG179400.1370505140387396No Hit
CAAGGTCGCTGTTCAATACATCGGATAGTTCGCGACACC178120.1360726731358991No Hit
CAAGGTCGCTGTTCAATACATCGGACGCGACTATCGCGC177080.1352781774023412No Hit
CAAGGTCGCTGTTCAATACATCGGAACGTTCGACCGCGG175130.1337884979019201No Hit
CAAGGTCGCTGTTCAATACATCGGATCGACGCGTAAACG175010.1336968253172788No Hit
CAAGGTCGCTGTTCAATACATCGGAGTGATATCGCGTTA172880.1320696369398958No Hit
CAAGGTCGCTGTTCAATACATCGGACGATTCGACGGTCG168400.12864719377995404No Hit
CAAGGTCGCTGTTCAATACATCGGACGTTCGAACGTTCG164240.12546921084572235No Hit
CAAGGTCGCTGTTCAATACATCGGATTTCGACGCGTCGA161180.1231315599373693No Hit
CAAGGTCGCTGTTCAATACATCGGACCGCGCGTATAGTC157590.12038902178018382No Hit
CAAGGTCGCTGTTCAATACATCGGACGCGATCGGTATCG156650.1196709198671603No Hit
CAAGGTCGCTGTTCAATACATCGGAATCGTACCGCGCGT150410.11490394546581285No Hit
CAAGGTCGCTGTTCAATACATCGGACCGCGCGATAAGAC150230.1147664365888509No Hit
CAAGGTCGCTGTTCAATACATCGGACGACGTTAACGCGT148940.11378095630395696No Hit
ACGCGGCCGCCGAAACGCGTATCGCGCGCATAATAGCTC144960.11074048224668726No Hit
CAAGGTCGCTGTTCAATACATCGGACGATCGTACGATAG144880.11067936719025974No Hit
CAAGGTCGCTGTTCAATACATCGGATCGCGATTACGATG142110.10856325836145644No Hit
CAAGGTCGCTGTTCAATACATCGGACGCGATATCACTCG140610.10741735105344022No Hit
CAAGGTCGCTGTTCAATACATCGGAACGCGAATCGTCGA133700.10213853805451217No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.7)