FastQCFastQC Report
Thu 24 Nov 2022
BS18846A.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameBS18846A.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13187080
Sequences flagged as poor quality0
Sequence length39
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GATAGACAGCTGCTGAACCAATGGGACCAAGCTTCACAC2332561.768822210830601No Hit
AGACAGCTGCTGAACCAATGGGACCAAGCTTCACACCGA255050.19340900335783207No Hit
CAAGGTCGCTGTTCAATACATCGGACGCATATCGCGTCG139310.10564127919145101No Hit
CAAGGTCGCTGTTCAATACATCGGACGCGAAATTCGTAT138870.10530761927583665No Hit
CAAGGTCGCTGTTCAATACATCGGATTCGCGCGTAACGA135400.1026762558504233No Hit
CAAGGTCGCTGTTCAATACATCGGACGCGATACGACCGC133160.10097762355275011No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.7)