FastQCFastQC Report
Thu 24 Nov 2022
BS18847A.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameBS18847A.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12309210
Sequences flagged as poor quality0
Sequence length39
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GATAGACAGCTGCTGAACCAATGGGACCAAGCTTCACAC2966102.409659108911132No Hit
AGACAGCTGCTGAACCAATGGGACCAAGCTTCACACCGA340270.2764352870736627No Hit
ATACGCGGCCGCCGAAACGCGTATCGCGCGCATAATAGC249490.20268563132808687No Hit
CAAGGTCGCTGTTCAATACATCGGACGCATATCGCGTCG194860.1583042291097479No Hit
CAAGGTCGCTGTTCAATACATCGGACGCGAAATTCGTAT191460.15554206971852783No Hit
CAAGGTCGCTGTTCAATACATCGGATTATCGCGTCGCGA182360.14814923134790942No Hit
CAAGGTCGCTGTTCAATACATCGGATTCGCGCGTAACGA179250.145622667904764No Hit
ATAGACAGCTGCTGAACCAATGGGACCAAGCTTCACACC173620.14104885691283195No Hit
CAAGGTCGCTGTTCAATACATCGGACGCGATACGACCGC173220.1407238969844531No Hit
CAAGGTCGCTGTTCAATACATCGGACGATACGCGTTGGT166340.1351345862163372No Hit
CAAGGTCGCTGTTCAATACATCGGACCGTACGTCGTGTC164780.13386724249565976No Hit
ATGTGTTCGACCCTATACGCGGCCGCCGAAACGCGTATC164250.1334366705905578No Hit
CAAGGTCGCTGTTCAATACATCGGACCGCGATACGACTC163060.13246991480363077No Hit
CAAGGTCGCTGTTCAATACATCGGATATCGCGCGAAACG160860.13068263519754722No Hit
CAAGGTCGCTGTTCAATACATCGGAACGATTCGACGATC159950.12994335136048535No Hit
CAAGGTCGCTGTTCAATACATCGGACGATAGTCGCGTCG158660.12889535559146362No Hit
CAAGGTCGCTGTTCAATACATCGGACGCGACTATCGCGC157980.1283429237132196No Hit
CAAGGTCGCTGTTCAATACATCGGACGCCGATTACGTGT155760.1265393961107171No Hit
CAAGGTCGCTGTTCAATACATCGGACCGCGCGTAATGCG149800.1216974931778725No Hit
CAAGGTCGCTGTTCAATACATCGGACGATACGCCGATCG146950.11938215368817334No Hit
CAAGGTCGCTGTTCAATACATCGGATAGTTCGCGACACC146180.11875660582604407No Hit
CAAGGTCGCTGTTCAATACATCGGATCGACGCGTAAACG143960.11695307822354156No Hit
CAAGGTCGCTGTTCAATACATCGGAGTGATATCGCGTTA141610.11504393864431592No Hit
CAAGGTCGCTGTTCAATACATCGGACGATTCGACGGTCG139940.1136872309433343No Hit
CAAGGTCGCTGTTCAATACATCGGACGTTCGAACGTTCG139660.11345975899346912No Hit
CAAGGTCGCTGTTCAATACATCGGAACGTTCGACCGCGG138570.11257424318863679No Hit
CAAGGTCGCTGTTCAATACATCGGATTTCGACGCGTCGA135890.11039701166849862No Hit
CAAGGTCGCTGTTCAATACATCGGACGCGATCGGTATCG133330.10831726812687409No Hit
CAAGGTCGCTGTTCAATACATCGGACGATCGTACGATAG132110.10732614034531868No Hit
CAAGGTCGCTGTTCAATACATCGGACCGCGCGTATAGTC131760.10704180040798719No Hit
CAAGGTCGCTGTTCAATACATCGGACGACGTTAACGCGT130900.10634313656197271No Hit
CAAGGTCGCTGTTCAATACATCGGAATCGTACCGCGCGT128280.10421464903109134No Hit
CAAGGTCGCTGTTCAATACATCGGACCGCGCGATAAGAC126110.10245174141963619No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.7)