Index of /public/skoklab/CTCF_mutation

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[PARENTDIR]Parent Directory  -  
[ ]TotalRNA_H455R_ID_Rep1.bin1.rpkm.bw2022-12-01 08:31 297M 
[ ]TotalRNA_H455R_ID_Rep2.bin1.rpkm.bw2022-12-01 08:31 112M 
[ ]TotalRNA_K365T_ID_Rep1.bin1.rpkm.bw2022-12-01 08:31 244M 
[ ]TotalRNA_K365T_ID_Rep2.bin1.rpkm.bw2022-12-01 08:31 205M 
[ ]TotalRNA_Q418R_ID_Rep1.bin1.rpkm.bw2022-12-01 08:31 212M 
[ ]TotalRNA_Q418R_ID_Rep2.bin1.rpkm.bw2022-12-01 08:31 184M 
[ ]TotalRNA_R339Q_ID_Rep1.bin1.rpkm.bw2022-12-01 08:31 175M 
[ ]TotalRNA_R339Q_ID_Rep2.bin1.rpkm.bw2022-12-01 08:31 213M 
[ ]TotalRNA_R342C_ID_Rep1.bin1.rpkm.bw2022-12-01 08:31 164M 
[ ]TotalRNA_R342C_ID_Rep2.bin1.rpkm.bw2022-12-01 08:31 154M 
[ ]TotalRNA_R377C_ID_Rep1.bin1.rpkm.bw2022-12-01 08:31 246M 
[ ]TotalRNA_R377C_ID_Rep2.bin1.rpkm.bw2022-12-01 08:31 256M 
[ ]TotalRNA_R377H_ID_Rep1.bin1.rpkm.bw2022-12-01 08:31 227M 
[ ]TotalRNA_R377H_ID_Rep2.bin1.rpkm.bw2022-12-01 08:31 314M 
[ ]TotalRNA_R448Q_ID_Rep1.bin1.rpkm.bw2022-12-01 08:31 167M 
[ ]TotalRNA_R448Q_ID_Rep2.bin1.rpkm.bw2022-12-01 08:31 170M 
[ ]TotalRNA_S354F_ID_Rep1.bin1.rpkm.bw2022-12-01 08:31 97M 
[ ]TotalRNA_S354F_ID_Rep2.bin1.rpkm.bw2022-12-01 08:31 133M 
[ ]TotalRNA_WT-CTCF_ID_Rep1.bin1.rpkm.bw2022-12-01 08:31 179M 
[ ]TotalRNA_WT-CTCF_ID_Rep2.bin1.rpkm.bw2022-12-01 08:31 217M 
[ ]dedup_extract_TotalRNA_H455R_ID_Rep1.bam2022-12-06 19:14 1.8M 
[ ]dedup_extract_TotalRNA_H455R_ID_Rep1.bam.bai2022-12-06 19:20 51K 
[ ]dedup_extract_TotalRNA_H455R_ID_Rep2.bam2022-12-06 19:14 448K 
[ ]dedup_extract_TotalRNA_H455R_ID_Rep2.bam.bai2022-12-06 19:20 51K 
[ ]dedup_extract_TotalRNA_K365T_ID_Rep1.bam2022-12-06 19:14 863K 
[ ]dedup_extract_TotalRNA_K365T_ID_Rep1.bam.bai2022-12-06 19:20 51K 
[ ]dedup_extract_TotalRNA_K365T_ID_Rep2.bam2022-12-06 19:14 1.1M 
[ ]dedup_extract_TotalRNA_K365T_ID_Rep2.bam.bai2022-12-06 19:20 51K 
[ ]dedup_extract_TotalRNA_Q418R_ID_Rep1.bam2022-12-06 19:14 755K 
[ ]dedup_extract_TotalRNA_Q418R_ID_Rep1.bam.bai2022-12-06 19:20 51K 
[ ]dedup_extract_TotalRNA_Q418R_ID_Rep2.bam2022-12-06 19:14 491K 
[ ]dedup_extract_TotalRNA_Q418R_ID_Rep2.bam.bai2022-12-06 19:20 51K 
[ ]dedup_extract_TotalRNA_R339Q_ID_Rep1.bam2022-12-06 19:14 485K 
[ ]dedup_extract_TotalRNA_R339Q_ID_Rep1.bam.bai2022-12-06 19:20 51K 
[ ]dedup_extract_TotalRNA_R339Q_ID_Rep2.bam2022-12-06 19:14 1.0M 
[ ]dedup_extract_TotalRNA_R339Q_ID_Rep2.bam.bai2022-12-06 19:20 51K 
[ ]dedup_extract_TotalRNA_R342C_ID_Rep1.bam2022-12-06 19:14 363K 
[ ]dedup_extract_TotalRNA_R342C_ID_Rep1.bam.bai2022-12-06 19:20 51K 
[ ]dedup_extract_TotalRNA_R342C_ID_Rep2.bam2022-12-06 19:14 422K 
[ ]dedup_extract_TotalRNA_R342C_ID_Rep2.bam.bai2022-12-06 19:20 51K 
[ ]dedup_extract_TotalRNA_R377C_ID_Rep1.bam2022-12-06 19:14 672K 
[ ]dedup_extract_TotalRNA_R377C_ID_Rep1.bam.bai2022-12-06 19:20 51K 
[ ]dedup_extract_TotalRNA_R377C_ID_Rep2.bam2022-12-06 19:14 863K 
[ ]dedup_extract_TotalRNA_R377C_ID_Rep2.bam.bai2022-12-06 19:20 51K 
[ ]dedup_extract_TotalRNA_R377H_ID_Rep1.bam2022-12-06 19:14 1.0M 
[ ]dedup_extract_TotalRNA_R377H_ID_Rep1.bam.bai2022-12-06 19:20 51K 
[ ]dedup_extract_TotalRNA_R377H_ID_Rep2.bam2022-12-06 19:14 1.4M 
[ ]dedup_extract_TotalRNA_R377H_ID_Rep2.bam.bai2022-12-06 19:20 51K 
[ ]dedup_extract_TotalRNA_R448Q_ID_Rep1.bam2022-12-06 19:14 568K 
[ ]dedup_extract_TotalRNA_R448Q_ID_Rep1.bam.bai2022-12-06 19:20 51K 
[ ]dedup_extract_TotalRNA_R448Q_ID_Rep2.bam2022-12-06 19:14 650K 
[ ]dedup_extract_TotalRNA_R448Q_ID_Rep2.bam.bai2022-12-06 19:20 51K 
[ ]dedup_extract_TotalRNA_S354F_ID_Rep1.bam2022-12-06 19:14 194K 
[ ]dedup_extract_TotalRNA_S354F_ID_Rep1.bam.bai2022-12-06 19:20 51K 
[ ]dedup_extract_TotalRNA_S354F_ID_Rep2.bam2022-12-06 19:14 298K 
[ ]dedup_extract_TotalRNA_S354F_ID_Rep2.bam.bai2022-12-06 19:20 51K 
[ ]dedup_extract_TotalRNA_WT-CTCF_ID_Rep1.bam2022-12-06 19:14 712K 
[ ]dedup_extract_TotalRNA_WT-CTCF_ID_Rep1.bam.bai2022-12-06 19:20 51K 
[ ]dedup_extract_TotalRNA_WT-CTCF_ID_Rep2.bam2022-12-06 19:14 1.1M 
[ ]dedup_extract_TotalRNA_WT-CTCF_ID_Rep2.bam.bai2022-12-06 19:20 51K 
[TXT]dedup_igv_batch.txt2022-12-06 19:15 2.0K 
[ ]extract_TotalRNA_H455R_ID_Rep1.bam2022-12-01 11:35 2.5M 
[ ]extract_TotalRNA_H455R_ID_Rep1.bam.bai2022-12-01 11:35 51K 
[ ]extract_TotalRNA_H455R_ID_Rep2.bam2022-12-01 11:35 532K 
[ ]extract_TotalRNA_H455R_ID_Rep2.bam.bai2022-12-01 11:35 51K 
[ ]extract_TotalRNA_K365T_ID_Rep1.bam2022-12-01 11:35 1.1M 
[ ]extract_TotalRNA_K365T_ID_Rep1.bam.bai2022-12-01 11:35 51K 
[ ]extract_TotalRNA_K365T_ID_Rep2.bam2022-12-01 11:35 2.1M 
[ ]extract_TotalRNA_K365T_ID_Rep2.bam.bai2022-12-01 11:35 51K 
[ ]extract_TotalRNA_Q418R_ID_Rep1.bam2022-12-01 11:35 1.2M 
[ ]extract_TotalRNA_Q418R_ID_Rep1.bam.bai2022-12-01 11:35 51K 
[ ]extract_TotalRNA_Q418R_ID_Rep2.bam2022-12-01 11:35 797K 
[ ]extract_TotalRNA_Q418R_ID_Rep2.bam.bai2022-12-01 11:35 51K 
[ ]extract_TotalRNA_R339Q_ID_Rep1.bam2022-12-01 11:35 752K 
[ ]extract_TotalRNA_R339Q_ID_Rep1.bam.bai2022-12-01 11:35 51K 
[ ]extract_TotalRNA_R339Q_ID_Rep2.bam2022-12-01 11:35 1.5M 
[ ]extract_TotalRNA_R339Q_ID_Rep2.bam.bai2022-12-01 11:35 51K 
[ ]extract_TotalRNA_R342C_ID_Rep1.bam2022-12-01 11:35 675K 
[ ]extract_TotalRNA_R342C_ID_Rep1.bam.bai2022-12-01 11:35 51K 
[ ]extract_TotalRNA_R342C_ID_Rep2.bam2022-12-01 11:35 745K 
[ ]extract_TotalRNA_R342C_ID_Rep2.bam.bai2022-12-01 11:35 51K 
[ ]extract_TotalRNA_R377C_ID_Rep1.bam2022-12-01 11:35 1.6M 
[ ]extract_TotalRNA_R377C_ID_Rep1.bam.bai2022-12-01 11:35 51K 
[ ]extract_TotalRNA_R377C_ID_Rep2.bam2022-12-01 11:35 1.2M 
[ ]extract_TotalRNA_R377C_ID_Rep2.bam.bai2022-12-01 11:35 51K 
[ ]extract_TotalRNA_R377H_ID_Rep1.bam2022-12-01 11:35 1.6M 
[ ]extract_TotalRNA_R377H_ID_Rep1.bam.bai2022-12-01 11:35 51K 
[ ]extract_TotalRNA_R377H_ID_Rep2.bam2022-12-01 11:35 1.8M 
[ ]extract_TotalRNA_R377H_ID_Rep2.bam.bai2022-12-01 11:35 51K 
[ ]extract_TotalRNA_R448Q_ID_Rep1.bam2022-12-01 11:35 839K 
[ ]extract_TotalRNA_R448Q_ID_Rep1.bam.bai2022-12-01 11:35 51K 
[ ]extract_TotalRNA_R448Q_ID_Rep2.bam2022-12-01 11:35 1.2M 
[ ]extract_TotalRNA_R448Q_ID_Rep2.bam.bai2022-12-01 11:35 51K 
[ ]extract_TotalRNA_S354F_ID_Rep1.bam2022-12-01 11:35 1.7M 
[ ]extract_TotalRNA_S354F_ID_Rep1.bam.bai2022-12-01 11:35 51K 
[ ]extract_TotalRNA_S354F_ID_Rep2.bam2022-12-01 11:35 428K 
[ ]extract_TotalRNA_S354F_ID_Rep2.bam.bai2022-12-01 11:35 51K 
[ ]extract_TotalRNA_WT-CTCF_ID_Rep1.bam2022-12-01 11:35 1.5M 
[ ]extract_TotalRNA_WT-CTCF_ID_Rep1.bam.bai2022-12-01 11:35 51K 
[ ]extract_TotalRNA_WT-CTCF_ID_Rep2.bam2022-12-01 11:35 1.5M 
[ ]extract_TotalRNA_WT-CTCF_ID_Rep2.bam.bai2022-12-01 11:35 51K 
[ ]extract_trimmed_SB12_TotalRNA_H455R_D_Rep1_S2.bam2022-12-02 20:42 1.2M 
[ ]extract_trimmed_SB12_TotalRNA_H455R_D_Rep1_S2.bam.bai2022-12-02 20:42 51K 
[ ]extract_trimmed_SB14_TotalRNA_H455R_D_Rep2_S4.bam2022-12-02 20:42 1.2M 
[ ]extract_trimmed_SB14_TotalRNA_H455R_D_Rep2_S4.bam.bai2022-12-02 20:42 51K 
[ ]extract_trimmed_SB16_TotalRNA_Q418R_D_Rep1_S6.bam2022-12-02 20:42 477K 
[ ]extract_trimmed_SB16_TotalRNA_Q418R_D_Rep1_S6.bam.bai2022-12-02 20:42 51K 
[ ]extract_trimmed_SB18_TotalRNA_Q418R_D_Rep2_S8.bam2022-12-02 20:42 187K 
[ ]extract_trimmed_SB18_TotalRNA_Q418R_D_Rep2_S8.bam.bai2022-12-02 20:42 51K 
[ ]extract_trimmed_SB20_TotalRNA_K365T_D_Rep1_S10.bam2022-12-02 20:42 1.0M 
[ ]extract_trimmed_SB20_TotalRNA_K365T_D_Rep1_S10.bam.bai2022-12-02 20:42 51K 
[ ]extract_trimmed_SB22_TotalRNA_K365T_D_Rep2_S12.bam2022-12-02 20:42 1.7M 
[ ]extract_trimmed_SB22_TotalRNA_K365T_D_Rep2_S12.bam.bai2022-12-02 20:42 51K 
[ ]extract_trimmed_SB24_TotalRNA_R342C_D_Rep1_S14.bam2022-12-02 20:42 936K 
[ ]extract_trimmed_SB24_TotalRNA_R342C_D_Rep1_S14.bam.bai2022-12-02 20:42 51K 
[ ]extract_trimmed_SB26_TotalRNA_R342C_D_Rep2_S16.bam2022-12-02 20:42 734K 
[ ]extract_trimmed_SB26_TotalRNA_R342C_D_Rep2_S16.bam.bai2022-12-02 20:42 51K 
[ ]extract_trimmed_SB28_TotalRNA_S354F_D_Rep1_S18.bam2022-12-02 20:42 888K 
[ ]extract_trimmed_SB28_TotalRNA_S354F_D_Rep1_S18.bam.bai2022-12-02 20:42 51K 
[ ]extract_trimmed_SB30_TotalRNA_S354F_D_Rep2_S20.bam2022-12-02 20:42 502K 
[ ]extract_trimmed_SB30_TotalRNA_S354F_D_Rep2_S20.bam.bai2022-12-02 20:42 51K 
[ ]extract_trimmed_SB32_TotalRNA_R448Q_D_Rep1_S22.bam2022-12-02 20:42 1.6M 
[ ]extract_trimmed_SB32_TotalRNA_R448Q_D_Rep1_S22.bam.bai2022-12-02 20:42 51K 
[ ]extract_trimmed_SB34_TotalRNA_R448Q_D_Rep2_S24.bam2022-12-02 20:42 1.8M 
[ ]extract_trimmed_SB34_TotalRNA_R448Q_D_Rep2_S24.bam.bai2022-12-02 20:42 51K 
[ ]extract_trimmed_SB36_TotalRNA_R339Q_D_Rep1_S26.bam2022-12-02 20:42 1.1M 
[ ]extract_trimmed_SB36_TotalRNA_R339Q_D_Rep1_S26.bam.bai2022-12-02 20:42 51K 
[ ]extract_trimmed_SB38_TotalRNA_R339Q_D_Rep2_S28.bam2022-12-02 20:42 836K 
[ ]extract_trimmed_SB38_TotalRNA_R339Q_D_Rep2_S28.bam.bai2022-12-02 20:42 51K 
[ ]extract_trimmed_SB40_TotalRNA_R377C_D_Rep1_S30.bam2022-12-02 20:42 760K 
[ ]extract_trimmed_SB40_TotalRNA_R377C_D_Rep1_S30.bam.bai2022-12-02 20:42 51K 
[ ]extract_trimmed_SB42_TotalRNA_R377C_D_Rep2_S32.bam2022-12-02 20:42 1.0M 
[ ]extract_trimmed_SB42_TotalRNA_R377C_D_Rep2_S32.bam.bai2022-12-02 20:42 51K 
[ ]extract_trimmed_SB43_TotalRNA_WT_CTCF_UN_Rep1_S33.bam2022-12-02 20:42 383K 
[ ]extract_trimmed_SB43_TotalRNA_WT_CTCF_UN_Rep1_S33.bam.bai2022-12-02 20:42 51K 
[ ]extract_trimmed_SB44_TotalRNA_WT_CTCF_IAA_Rep1_S34.bam2022-12-02 20:42 453K 
[ ]extract_trimmed_SB44_TotalRNA_WT_CTCF_IAA_Rep1_S34.bam.bai2022-12-02 20:42 51K 
[ ]extract_trimmed_SB46_TotalRNA_WT_CTCF_D_Rep1_S36.bam2022-12-02 20:42 1.2M 
[ ]extract_trimmed_SB46_TotalRNA_WT_CTCF_D_Rep1_S36.bam.bai2022-12-02 20:42 51K 
[ ]extract_trimmed_SB47_TotalRNA_WT_CTCF_UN_Rep2_S37.bam2022-12-02 20:42 787K 
[ ]extract_trimmed_SB47_TotalRNA_WT_CTCF_UN_Rep2_S37.bam.bai2022-12-02 20:42 51K 
[ ]extract_trimmed_SB48_TotalRNA_WT_CTCF_IAA_Rep2_S38.bam2022-12-02 20:42 1.1M 
[ ]extract_trimmed_SB48_TotalRNA_WT_CTCF_IAA_Rep2_S38.bam.bai2022-12-02 20:42 51K 
[ ]extract_trimmed_SB50_TotalRNA_WT_CTCF_D_Rep2_S40.bam2022-12-02 20:42 1.4M 
[ ]extract_trimmed_SB50_TotalRNA_WT_CTCF_D_Rep2_S40.bam.bai2022-12-02 20:42 51K 
[ ]extract_trimmed_SB52_TotalRNA_R377H_D_Rep1_S42.bam2022-12-02 20:42 1.0M 
[ ]extract_trimmed_SB52_TotalRNA_R377H_D_Rep1_S42.bam.bai2022-12-02 20:42 51K 
[ ]extract_trimmed_SB54_TotalRNA_R377H_D_Rep2_S44.bam2022-12-02 20:42 1.8M 
[ ]extract_trimmed_SB54_TotalRNA_R377H_D_Rep2_S44.bam.bai2022-12-02 20:42 51K 
[TXT]igv_batch.txt2022-12-06 19:15 9.1K 
[ ]trimmed_SB12_TotalRNA_H455R_D_Rep1_S2.bin1.rpkm.bw2022-12-02 20:42 235M 
[ ]trimmed_SB14_TotalRNA_H455R_D_Rep2_S4.bin1.rpkm.bw2022-12-02 20:42 160M 
[ ]trimmed_SB16_TotalRNA_Q418R_D_Rep1_S6.bin1.rpkm.bw2022-12-02 20:42 125M 
[ ]trimmed_SB18_TotalRNA_Q418R_D_Rep2_S8.bin1.rpkm.bw2022-12-02 20:42 74M 
[ ]trimmed_SB20_TotalRNA_K365T_D_Rep1_S10.bin1.rpkm.bw2022-12-02 20:42 229M 
[ ]trimmed_SB22_TotalRNA_K365T_D_Rep2_S12.bin1.rpkm.bw2022-12-02 20:42 196M 
[ ]trimmed_SB24_TotalRNA_R342C_D_Rep1_S14.bin1.rpkm.bw2022-12-02 20:42 230M 
[ ]trimmed_SB26_TotalRNA_R342C_D_Rep2_S16.bin1.rpkm.bw2022-12-02 20:42 163M 
[ ]trimmed_SB28_TotalRNA_S354F_D_Rep1_S18.bin1.rpkm.bw2022-12-02 20:42 245M 
[ ]trimmed_SB30_TotalRNA_S354F_D_Rep2_S20.bin1.rpkm.bw2022-12-02 20:42 131M 
[ ]trimmed_SB32_TotalRNA_R448Q_D_Rep1_S22.bin1.rpkm.bw2022-12-02 20:42 201M 
[ ]trimmed_SB34_TotalRNA_R448Q_D_Rep2_S24.bin1.rpkm.bw2022-12-02 20:42 207M 
[ ]trimmed_SB36_TotalRNA_R339Q_D_Rep1_S26.bin1.rpkm.bw2022-12-02 20:42 184M 
[ ]trimmed_SB38_TotalRNA_R339Q_D_Rep2_S28.bin1.rpkm.bw2022-12-02 20:42 149M 
[ ]trimmed_SB40_TotalRNA_R377C_D_Rep1_S30.bin1.rpkm.bw2022-12-02 20:42 140M 
[ ]trimmed_SB42_TotalRNA_R377C_D_Rep2_S32.bin1.rpkm.bw2022-12-02 20:42 212M 
[ ]trimmed_SB43_TotalRNA_WT_CTCF_UN_Rep1_S33.bin1.rpkm.bw2022-12-02 20:42 129M 
[ ]trimmed_SB44_TotalRNA_WT_CTCF_IAA_Rep1_S34.bin1.rpkm.bw2022-12-02 20:42 116M 
[ ]trimmed_SB46_TotalRNA_WT_CTCF_D_Rep1_S36.bin1.rpkm.bw2022-12-02 20:42 186M 
[ ]trimmed_SB47_TotalRNA_WT_CTCF_UN_Rep2_S37.bin1.rpkm.bw2022-12-02 20:42 183M 
[ ]trimmed_SB48_TotalRNA_WT_CTCF_IAA_Rep2_S38.bin1.rpkm.bw2022-12-02 20:42 241M 
[ ]trimmed_SB50_TotalRNA_WT_CTCF_D_Rep2_S40.bin1.rpkm.bw2022-12-02 20:42 219M 
[ ]trimmed_SB52_TotalRNA_R377H_D_Rep1_S42.bin1.rpkm.bw2022-12-02 20:42 170M 
[ ]trimmed_SB54_TotalRNA_R377H_D_Rep2_S44.bin1.rpkm.bw2022-12-02 20:42 308M