Index of /public/yanailab/jingye_share/20231129/D1

[ICO]NameLast modifiedSizeDescription
[PARENTDIR]Parent Directory  -  
[ ]01_incoming_data.infercnv_obj2023-12-08 00:50 56M 
[ ]02_reduced_by_cutoff.infercnv_obj2023-12-08 00:50 52M 
[ ]03_normalized_by_depthHMMi6.infercnv_obj2023-12-08 00:54 54M 
[ ]04_logtransformedHMMi6.infercnv_obj2023-12-08 00:54 45M 
[ ]05_scaledHMMi6.infercnv_obj2023-12-08 00:55 313M 
[ ]08_remove_ref_avg_from_obs_logFCHMMi6.infercnv_obj2023-12-08 00:55 313M 
[ ]09_apply_max_centered_expr_thresholdHMMi6.infercnv_obj2023-12-08 00:56 310M 
[ ]10_smoothed_by_chrHMMi6.infercnv_obj2023-12-08 00:58 312M 
[ ]11_recentered_cells_by_chrHMMi6.infercnv_obj2023-12-08 00:59 313M 
[ ]12_remove_ref_avg_from_obs_adjustHMMi6.infercnv_obj2023-12-08 01:00 313M 
[ ]14_invert_log_transformHMMi6.infercnv_obj2023-12-08 01:01 302M 
[ ]15_tumor_subclustersHMMi6.qnorm.infercnv_obj2023-12-08 01:31 302M 
[ ]17_HMM_predHMMi6.qnorm.hmm_mode-subclusters.cell_groupings2023-12-08 02:28 265K 
[ ]17_HMM_predHMMi6.qnorm.hmm_mode-subclusters.genes_used.dat2023-12-08 02:28 249K 
[ ]17_HMM_predHMMi6.qnorm.hmm_mode-subclusters.infercnv_obj2023-12-08 02:29 39M 
[ ]17_HMM_predHMMi6.qnorm.hmm_mode-subclusters.pred_cnv_genes.dat2023-12-08 02:28 861K 
[ ]17_HMM_predHMMi6.qnorm.hmm_mode-subclusters.pred_cnv_regions.dat2023-12-08 02:28 15K 
[ ]18_HMM_pred.Bayes_NetHMMi6.qnorm.hmm_mode-subclusters.mcmc_obj2023-12-08 02:37 350M 
[ ]19_HMM_pred.Bayes_NetHMMi6.qnorm.hmm_mode-subclusters.Pnorm_0.5.infercnv_obj2023-12-08 02:42 39M 
[ ]20_HMM_pred.repr_intensitiesHMMi6.qnorm.hmm_mode-subclusters.Pnorm_0.5.infercnv_obj2023-12-08 02:45 39M 
[ ]22_denoiseHMMi6.qnorm.NF_NA.SD_1.5.NL_FALSE.infercnv_obj2023-12-08 02:48 74M 
[DIR]BayesNetOutput.HMMi6.qnorm.hmm_mode-subclusters/2023-12-08 02:41 -  
[TXT]D1-IMSML-coords.csv2023-12-21 18:58 17M 
[TXT]D1-sequence_1488-roi#2-IMSML-coords.csv2023-12-21 18:58 17M 
[ ]D1_sc_counts.matrix2023-12-08 00:50 276M 
[ ]D1_sc_meta.matrix2023-12-08 00:50 105K 
[TXT]General_HCL_1_members.txt2023-12-08 02:50 610M 
[ ]HMM_CNV_predictions.HMMi6.qnorm.hmm_mode-subclusters.Pnorm_0.5.pred_cnv_genes.dat2023-12-08 02:44 861K 
[ ]HMM_CNV_predictions.HMMi6.qnorm.hmm_mode-subclusters.Pnorm_0.5.pred_cnv_regions.dat2023-12-08 02:44 15K 
[ ]expr.infercnv.17_HMM_predHMMi6.qnorm.hmm_mode-subclusters.dat2023-12-08 02:29 72M 
[ ]expr.infercnv.19_HMM_pred.Bayes_Net.Pnorm_0.5.dat2023-12-08 02:42 72M 
[ ]expr.infercnv.20_HMM_predHMMi6.qnorm.hmm_mode-subclusters.Pnorm_0.5.repr_intensities.dat2023-12-08 02:45 72M 
[ ]expr.infercnv.dat2023-12-08 02:49 610M 
[ ]expr.infercnv.preliminary.dat2023-12-08 01:32 623M 
[TXT]infercnv.17_HMM_predHMMi6.qnorm.hmm_mode-subclusters.heatmap_thresholds.txt2023-12-08 02:30 56  
[TXT]infercnv.17_HMM_predHMMi6.qnorm.hmm_mode-subclusters.observation_groupings.txt2023-12-08 02:30 228K 
[TXT]infercnv.17_HMM_predHMMi6.qnorm.hmm_mode-subclusters.observations.txt2023-12-08 02:31 72M 
[TXT]infercnv.17_HMM_predHMMi6.qnorm.hmm_mode-subclusters.observations_dendrogram.txt2023-12-08 02:29 213K 
[IMG]infercnv.17_HMM_predHMMi6.qnorm.hmm_mode-subclusters.png2023-12-08 02:31 156K 
[TXT]infercnv.19_HMM_pred.Bayes_Net.Pnorm_0.5.heatmap_thresholds.txt2023-12-08 02:43 56  
[TXT]infercnv.19_HMM_pred.Bayes_Net.Pnorm_0.5.observation_groupings.txt2023-12-08 02:43 228K 
[TXT]infercnv.19_HMM_pred.Bayes_Net.Pnorm_0.5.observations.txt2023-12-08 02:44 72M 
[TXT]infercnv.19_HMM_pred.Bayes_Net.Pnorm_0.5.observations_dendrogram.txt2023-12-08 02:42 213K 
[IMG]infercnv.19_HMM_pred.Bayes_Net.Pnorm_0.5.png2023-12-08 02:44 161K 
[TXT]infercnv.20_HMM_predHMMi6.qnorm.hmm_mode-subclusters.Pnorm_0.5.repr_intensities.heatmap_thresholds.txt2023-12-08 02:46 200  
[TXT]infercnv.20_HMM_predHMMi6.qnorm.hmm_mode-subclusters.Pnorm_0.5.repr_intensities.observation_groupings.txt2023-12-08 02:46 228K 
[TXT]infercnv.20_HMM_predHMMi6.qnorm.hmm_mode-subclusters.Pnorm_0.5.repr_intensities.observations.txt2023-12-08 02:47 72M 
[TXT]infercnv.20_HMM_predHMMi6.qnorm.hmm_mode-subclusters.Pnorm_0.5.repr_intensities.observations_dendrogram.txt2023-12-08 02:45 213K 
[IMG]infercnv.20_HMM_predHMMi6.qnorm.hmm_mode-subclusters.Pnorm_0.5.repr_intensities.png2023-12-08 02:47 157K 
[TXT]infercnv.heatmap_thresholds.txt2023-12-08 02:50 268  
[TXT]infercnv.observation_groupings.txt2023-12-08 02:50 228K 
[TXT]infercnv.observations.txt2023-12-08 02:51 610M 
[TXT]infercnv.observations_dendrogram.txt2023-12-08 02:49 213K 
[IMG]infercnv.png2023-12-08 02:51 581K 
[TXT]infercnv.preliminary.heatmap_thresholds.txt2023-12-08 01:34 279  
[TXT]infercnv.preliminary.observation_groupings.txt2023-12-08 01:33 228K 
[TXT]infercnv.preliminary.observations.txt2023-12-08 01:35 623M 
[TXT]infercnv.preliminary.observations_dendrogram.txt2023-12-08 01:33 213K 
[IMG]infercnv.preliminary.png2023-12-08 01:35 1.3M 
[ ]preliminary.infercnv_obj2023-12-08 01:32 302M 
[ ]run.final.infercnv_obj2023-12-08 02:48 74M