2023-04-17 16:30:54 [time] __start__
2023-04-17 16:30:54 [monitor] cgroup memory limit of 137438953472 bytes detected
2023-04-17 16:30:59 [monitor] Process tree:
                                 PID VSZ(mb) RSS(mb) Procs  Read(mb) (calls) Write(mb) (calls) COMMAND
                               56930  231837      12     7         0      41         0       8 /gpfs/share/apps/spaceranger/1.2.1/external/martian/bin/mrjob /gpfs/share/apps/spaceranger/1.2.1/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/spaceranger/1.2.1/mro/rna/stages/spatial/detect_tissue main /gpfs/data/yanailab/projects/jw7078/processed_data/359-A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_IMAGING_CS/DETECT_TISSUE/fork0/chnk0-udc993dac7e /gpfs/data/yanailab/projects/jw7078/processed_data/359-A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_IMAGING_CS/DETECT_TISSUE/fork0/chnk0-udc993dac7e/files /gpfs/data/yanailab/projects/jw7078/processed_data/359-A1/journal/SPATIAL_RNA_COUNTER_CS.SPATIAL_IMAGING_CS.DETECT_TISSUE.fork0.chnk0.udc993dac7e 
                               56937   39035      85     1         0    4421         0     265   python /gpfs/share/apps/spaceranger/1.2.1/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/spaceranger/1.2.1/mro/rna/stages/spatial/detect_tissue main /gpfs/data/yanailab/projects/jw7078/processed_data/359-A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_IMAGING_CS/DETECT_TISSUE/fork0/chnk0-udc993dac7e /gpfs/data/yanailab/projects/jw7078/processed_data/359-A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_IMAGING_CS/DETECT_TISSUE/fork0/chnk0-udc993dac7e/files /gpfs/data/yanailab/projects/jw7078/processed_data/359-A1/journal/SPATIAL_RNA_COUNTER_CS.SPATIAL_IMAGING_CS.DETECT_TISSUE.fork0.chnk0.udc993dac7e 
2023-04-17 16:30:59 [monitor] Stage exceeded its address space quota (using 264.5, allowed 16G)
2023-04-17 16:31:04 [monitor] Process tree:
                                 PID VSZ(mb) RSS(mb) Procs  Read(mb) (calls) Write(mb) (calls) COMMAND
                               56930  231837      12     7         0      71         0      10 /gpfs/share/apps/spaceranger/1.2.1/external/martian/bin/mrjob /gpfs/share/apps/spaceranger/1.2.1/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/spaceranger/1.2.1/mro/rna/stages/spatial/detect_tissue main /gpfs/data/yanailab/projects/jw7078/processed_data/359-A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_IMAGING_CS/DETECT_TISSUE/fork0/chnk0-udc993dac7e /gpfs/data/yanailab/projects/jw7078/processed_data/359-A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_IMAGING_CS/DETECT_TISSUE/fork0/chnk0-udc993dac7e/files /gpfs/data/yanailab/projects/jw7078/processed_data/359-A1/journal/SPATIAL_RNA_COUNTER_CS.SPATIAL_IMAGING_CS.DETECT_TISSUE.fork0.chnk0.udc993dac7e 
                               56937   39076     112     1         0    6503         0     589   python /gpfs/share/apps/spaceranger/1.2.1/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/spaceranger/1.2.1/mro/rna/stages/spatial/detect_tissue main /gpfs/data/yanailab/projects/jw7078/processed_data/359-A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_IMAGING_CS/DETECT_TISSUE/fork0/chnk0-udc993dac7e /gpfs/data/yanailab/projects/jw7078/processed_data/359-A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_IMAGING_CS/DETECT_TISSUE/fork0/chnk0-udc993dac7e/files /gpfs/data/yanailab/projects/jw7078/processed_data/359-A1/journal/SPATIAL_RNA_COUNTER_CS.SPATIAL_IMAGING_CS.DETECT_TISSUE.fork0.chnk0.udc993dac7e 
2023-04-17 16:31:04 [monitor] Stage exceeded its address space quota (using 264.6, allowed 16G)
2023-04-17 16:31:08 [time] __end__
