2023-04-17 16:48:29 [time] __start__
2023-04-17 16:48:29 [monitor] cgroup memory limit of 137438953472 bytes detected
2023-04-17 16:48:34 [monitor] Process tree:
                                 PID VSZ(mb) RSS(mb) Procs  Read(mb) (calls) Write(mb) (calls) COMMAND
                               61167  270403       8     8         0      67         0       7 /gpfs/share/apps/spaceranger/1.2.1/external/martian/bin/mrjob /gpfs/share/apps/spaceranger/1.2.1/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/spaceranger/1.2.1/mro/rna/stages/analyzer/run_differential_expression main /gpfs/data/yanailab/projects/jw7078/processed_data/359-A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_RNA_COUNTER/SPATIAL_RNA_ANALYZER/RUN_DIFFERENTIAL_EXPRESSION/fork0/chnk03-udc993db09d /gpfs/data/yanailab/projects/jw7078/processed_data/359-A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_RNA_COUNTER/SPATIAL_RNA_ANALYZER/RUN_DIFFERENTIAL_EXPRESSION/fork0/chnk03-udc993db09d/files /gpfs/data/yanailab/projects/jw7078/processed_data/359-A1/journal/SPATIAL_RNA_COUNTER_CS.SPATIAL_RNA_COUNTER.SPATIAL_RNA_ANALYZER.RUN_DIFFERENTIAL_EXPRESSION.fork0.chnk03.udc993db09d 
                               61187  309940     185    28         0    4207         0      80   python /gpfs/share/apps/spaceranger/1.2.1/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/spaceranger/1.2.1/mro/rna/stages/analyzer/run_differential_expression main /gpfs/data/yanailab/projects/jw7078/processed_data/359-A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_RNA_COUNTER/SPATIAL_RNA_ANALYZER/RUN_DIFFERENTIAL_EXPRESSION/fork0/chnk03-udc993db09d /gpfs/data/yanailab/projects/jw7078/processed_data/359-A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_RNA_COUNTER/SPATIAL_RNA_ANALYZER/RUN_DIFFERENTIAL_EXPRESSION/fork0/chnk03-udc993db09d/files /gpfs/data/yanailab/projects/jw7078/processed_data/359-A1/journal/SPATIAL_RNA_COUNTER_CS.SPATIAL_RNA_COUNTER.SPATIAL_RNA_ANALYZER.RUN_DIFFERENTIAL_EXPRESSION.fork0.chnk03.udc993db09d 
2023-04-17 16:48:34 [monitor] Stage exceeded its address space quota (using 566.7, allowed 6G)
2023-04-17 16:48:39 [monitor] Process tree:
                                 PID VSZ(mb) RSS(mb) Procs  Read(mb) (calls) Write(mb) (calls) COMMAND
                               61167  270403       8     8         0     152         0       9 /gpfs/share/apps/spaceranger/1.2.1/external/martian/bin/mrjob /gpfs/share/apps/spaceranger/1.2.1/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/spaceranger/1.2.1/mro/rna/stages/analyzer/run_differential_expression main /gpfs/data/yanailab/projects/jw7078/processed_data/359-A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_RNA_COUNTER/SPATIAL_RNA_ANALYZER/RUN_DIFFERENTIAL_EXPRESSION/fork0/chnk03-udc993db09d /gpfs/data/yanailab/projects/jw7078/processed_data/359-A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_RNA_COUNTER/SPATIAL_RNA_ANALYZER/RUN_DIFFERENTIAL_EXPRESSION/fork0/chnk03-udc993db09d/files /gpfs/data/yanailab/projects/jw7078/processed_data/359-A1/journal/SPATIAL_RNA_COUNTER_CS.SPATIAL_RNA_COUNTER.SPATIAL_RNA_ANALYZER.RUN_DIFFERENTIAL_EXPRESSION.fork0.chnk03.udc993db09d 
                               61187  309949     193    28         0    4207         0      84   python /gpfs/share/apps/spaceranger/1.2.1/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/spaceranger/1.2.1/mro/rna/stages/analyzer/run_differential_expression main /gpfs/data/yanailab/projects/jw7078/processed_data/359-A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_RNA_COUNTER/SPATIAL_RNA_ANALYZER/RUN_DIFFERENTIAL_EXPRESSION/fork0/chnk03-udc993db09d /gpfs/data/yanailab/projects/jw7078/processed_data/359-A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_RNA_COUNTER/SPATIAL_RNA_ANALYZER/RUN_DIFFERENTIAL_EXPRESSION/fork0/chnk03-udc993db09d/files /gpfs/data/yanailab/projects/jw7078/processed_data/359-A1/journal/SPATIAL_RNA_COUNTER_CS.SPATIAL_RNA_COUNTER.SPATIAL_RNA_ANALYZER.RUN_DIFFERENTIAL_EXPRESSION.fork0.chnk03.udc993db09d 
2023-04-17 16:48:39 [monitor] Stage exceeded its address space quota (using 566.7, allowed 6G)
2023-04-17 16:48:42 [time] __end__
