2023-04-17 16:48:54 [time] __start__
2023-04-17 16:48:54 [monitor] cgroup memory limit of 137438953472 bytes detected
2023-04-17 16:48:59 [monitor] Process tree:
                                 PID VSZ(mb) RSS(mb) Procs  Read(mb) (calls) Write(mb) (calls) COMMAND
                               61478  270403      12     8         0      67         0       7 /gpfs/share/apps/spaceranger/1.2.1/external/martian/bin/mrjob /gpfs/share/apps/spaceranger/1.2.1/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/spaceranger/1.2.1/mro/rna/stages/analyzer/run_differential_expression main /gpfs/data/yanailab/projects/jw7078/processed_data/359-A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_RNA_COUNTER/SPATIAL_RNA_ANALYZER/RUN_DIFFERENTIAL_EXPRESSION/fork0/chnk07-udc993db09d /gpfs/data/yanailab/projects/jw7078/processed_data/359-A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_RNA_COUNTER/SPATIAL_RNA_ANALYZER/RUN_DIFFERENTIAL_EXPRESSION/fork0/chnk07-udc993db09d/files /gpfs/data/yanailab/projects/jw7078/processed_data/359-A1/journal/SPATIAL_RNA_COUNTER_CS.SPATIAL_RNA_COUNTER.SPATIAL_RNA_ANALYZER.RUN_DIFFERENTIAL_EXPRESSION.fork0.chnk07.udc993db09d 
                               61486  309942     191    28         0    4203         0      81   python /gpfs/share/apps/spaceranger/1.2.1/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/spaceranger/1.2.1/mro/rna/stages/analyzer/run_differential_expression main /gpfs/data/yanailab/projects/jw7078/processed_data/359-A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_RNA_COUNTER/SPATIAL_RNA_ANALYZER/RUN_DIFFERENTIAL_EXPRESSION/fork0/chnk07-udc993db09d /gpfs/data/yanailab/projects/jw7078/processed_data/359-A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_RNA_COUNTER/SPATIAL_RNA_ANALYZER/RUN_DIFFERENTIAL_EXPRESSION/fork0/chnk07-udc993db09d/files /gpfs/data/yanailab/projects/jw7078/processed_data/359-A1/journal/SPATIAL_RNA_COUNTER_CS.SPATIAL_RNA_COUNTER.SPATIAL_RNA_ANALYZER.RUN_DIFFERENTIAL_EXPRESSION.fork0.chnk07.udc993db09d 
2023-04-17 16:48:59 [monitor] Stage exceeded its address space quota (using 566.7, allowed 6G)
2023-04-17 16:49:04 [monitor] Process tree:
                                 PID VSZ(mb) RSS(mb) Procs  Read(mb) (calls) Write(mb) (calls) COMMAND
                               61478  270403      12     8         0     152         0       9 /gpfs/share/apps/spaceranger/1.2.1/external/martian/bin/mrjob /gpfs/share/apps/spaceranger/1.2.1/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/spaceranger/1.2.1/mro/rna/stages/analyzer/run_differential_expression main /gpfs/data/yanailab/projects/jw7078/processed_data/359-A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_RNA_COUNTER/SPATIAL_RNA_ANALYZER/RUN_DIFFERENTIAL_EXPRESSION/fork0/chnk07-udc993db09d /gpfs/data/yanailab/projects/jw7078/processed_data/359-A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_RNA_COUNTER/SPATIAL_RNA_ANALYZER/RUN_DIFFERENTIAL_EXPRESSION/fork0/chnk07-udc993db09d/files /gpfs/data/yanailab/projects/jw7078/processed_data/359-A1/journal/SPATIAL_RNA_COUNTER_CS.SPATIAL_RNA_COUNTER.SPATIAL_RNA_ANALYZER.RUN_DIFFERENTIAL_EXPRESSION.fork0.chnk07.udc993db09d 
                               61486  309950     199    28         0    4203         0      84   python /gpfs/share/apps/spaceranger/1.2.1/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/spaceranger/1.2.1/mro/rna/stages/analyzer/run_differential_expression main /gpfs/data/yanailab/projects/jw7078/processed_data/359-A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_RNA_COUNTER/SPATIAL_RNA_ANALYZER/RUN_DIFFERENTIAL_EXPRESSION/fork0/chnk07-udc993db09d /gpfs/data/yanailab/projects/jw7078/processed_data/359-A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_RNA_COUNTER/SPATIAL_RNA_ANALYZER/RUN_DIFFERENTIAL_EXPRESSION/fork0/chnk07-udc993db09d/files /gpfs/data/yanailab/projects/jw7078/processed_data/359-A1/journal/SPATIAL_RNA_COUNTER_CS.SPATIAL_RNA_COUNTER.SPATIAL_RNA_ANALYZER.RUN_DIFFERENTIAL_EXPRESSION.fork0.chnk07.udc993db09d 
2023-04-17 16:49:04 [monitor] Stage exceeded its address space quota (using 566.8, allowed 6G)
2023-04-17 16:49:09 [monitor] Process tree:
                                 PID VSZ(mb) RSS(mb) Procs  Read(mb) (calls) Write(mb) (calls) COMMAND
                               61478  270403      12     8         0     237         0      11 /gpfs/share/apps/spaceranger/1.2.1/external/martian/bin/mrjob /gpfs/share/apps/spaceranger/1.2.1/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/spaceranger/1.2.1/mro/rna/stages/analyzer/run_differential_expression main /gpfs/data/yanailab/projects/jw7078/processed_data/359-A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_RNA_COUNTER/SPATIAL_RNA_ANALYZER/RUN_DIFFERENTIAL_EXPRESSION/fork0/chnk07-udc993db09d /gpfs/data/yanailab/projects/jw7078/processed_data/359-A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_RNA_COUNTER/SPATIAL_RNA_ANALYZER/RUN_DIFFERENTIAL_EXPRESSION/fork0/chnk07-udc993db09d/files /gpfs/data/yanailab/projects/jw7078/processed_data/359-A1/journal/SPATIAL_RNA_COUNTER_CS.SPATIAL_RNA_COUNTER.SPATIAL_RNA_ANALYZER.RUN_DIFFERENTIAL_EXPRESSION.fork0.chnk07.udc993db09d 
                               61486  309954     203    28         0    4203         0      88   python /gpfs/share/apps/spaceranger/1.2.1/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/spaceranger/1.2.1/mro/rna/stages/analyzer/run_differential_expression main /gpfs/data/yanailab/projects/jw7078/processed_data/359-A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_RNA_COUNTER/SPATIAL_RNA_ANALYZER/RUN_DIFFERENTIAL_EXPRESSION/fork0/chnk07-udc993db09d /gpfs/data/yanailab/projects/jw7078/processed_data/359-A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_RNA_COUNTER/SPATIAL_RNA_ANALYZER/RUN_DIFFERENTIAL_EXPRESSION/fork0/chnk07-udc993db09d/files /gpfs/data/yanailab/projects/jw7078/processed_data/359-A1/journal/SPATIAL_RNA_COUNTER_CS.SPATIAL_RNA_COUNTER.SPATIAL_RNA_ANALYZER.RUN_DIFFERENTIAL_EXPRESSION.fork0.chnk07.udc993db09d 
2023-04-17 16:49:09 [monitor] Stage exceeded its address space quota (using 566.8, allowed 6G)
2023-04-17 16:49:14 [monitor] Process tree:
                                 PID VSZ(mb) RSS(mb) Procs  Read(mb) (calls) Write(mb) (calls) COMMAND
                               61478  270403      12     8         0     322         0      13 /gpfs/share/apps/spaceranger/1.2.1/external/martian/bin/mrjob /gpfs/share/apps/spaceranger/1.2.1/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/spaceranger/1.2.1/mro/rna/stages/analyzer/run_differential_expression main /gpfs/data/yanailab/projects/jw7078/processed_data/359-A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_RNA_COUNTER/SPATIAL_RNA_ANALYZER/RUN_DIFFERENTIAL_EXPRESSION/fork0/chnk07-udc993db09d /gpfs/data/yanailab/projects/jw7078/processed_data/359-A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_RNA_COUNTER/SPATIAL_RNA_ANALYZER/RUN_DIFFERENTIAL_EXPRESSION/fork0/chnk07-udc993db09d/files /gpfs/data/yanailab/projects/jw7078/processed_data/359-A1/journal/SPATIAL_RNA_COUNTER_CS.SPATIAL_RNA_COUNTER.SPATIAL_RNA_ANALYZER.RUN_DIFFERENTIAL_EXPRESSION.fork0.chnk07.udc993db09d 
                               61486  309943     192    28         0    4203         0      90   python /gpfs/share/apps/spaceranger/1.2.1/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/spaceranger/1.2.1/mro/rna/stages/analyzer/run_differential_expression main /gpfs/data/yanailab/projects/jw7078/processed_data/359-A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_RNA_COUNTER/SPATIAL_RNA_ANALYZER/RUN_DIFFERENTIAL_EXPRESSION/fork0/chnk07-udc993db09d /gpfs/data/yanailab/projects/jw7078/processed_data/359-A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_RNA_COUNTER/SPATIAL_RNA_ANALYZER/RUN_DIFFERENTIAL_EXPRESSION/fork0/chnk07-udc993db09d/files /gpfs/data/yanailab/projects/jw7078/processed_data/359-A1/journal/SPATIAL_RNA_COUNTER_CS.SPATIAL_RNA_COUNTER.SPATIAL_RNA_ANALYZER.RUN_DIFFERENTIAL_EXPRESSION.fork0.chnk07.udc993db09d 
2023-04-17 16:49:14 [monitor] Stage exceeded its address space quota (using 566.7, allowed 6G)
2023-04-17 16:49:19 [monitor] Process tree:
                                 PID VSZ(mb) RSS(mb) Procs  Read(mb) (calls) Write(mb) (calls) COMMAND
                               61478  270404      12     8         0     407         0      15 /gpfs/share/apps/spaceranger/1.2.1/external/martian/bin/mrjob /gpfs/share/apps/spaceranger/1.2.1/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/spaceranger/1.2.1/mro/rna/stages/analyzer/run_differential_expression main /gpfs/data/yanailab/projects/jw7078/processed_data/359-A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_RNA_COUNTER/SPATIAL_RNA_ANALYZER/RUN_DIFFERENTIAL_EXPRESSION/fork0/chnk07-udc993db09d /gpfs/data/yanailab/projects/jw7078/processed_data/359-A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_RNA_COUNTER/SPATIAL_RNA_ANALYZER/RUN_DIFFERENTIAL_EXPRESSION/fork0/chnk07-udc993db09d/files /gpfs/data/yanailab/projects/jw7078/processed_data/359-A1/journal/SPATIAL_RNA_COUNTER_CS.SPATIAL_RNA_COUNTER.SPATIAL_RNA_ANALYZER.RUN_DIFFERENTIAL_EXPRESSION.fork0.chnk07.udc993db09d 
                               61486  309935     184    28         0    4203         0      92   python /gpfs/share/apps/spaceranger/1.2.1/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/spaceranger/1.2.1/mro/rna/stages/analyzer/run_differential_expression main /gpfs/data/yanailab/projects/jw7078/processed_data/359-A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_RNA_COUNTER/SPATIAL_RNA_ANALYZER/RUN_DIFFERENTIAL_EXPRESSION/fork0/chnk07-udc993db09d /gpfs/data/yanailab/projects/jw7078/processed_data/359-A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_RNA_COUNTER/SPATIAL_RNA_ANALYZER/RUN_DIFFERENTIAL_EXPRESSION/fork0/chnk07-udc993db09d/files /gpfs/data/yanailab/projects/jw7078/processed_data/359-A1/journal/SPATIAL_RNA_COUNTER_CS.SPATIAL_RNA_COUNTER.SPATIAL_RNA_ANALYZER.RUN_DIFFERENTIAL_EXPRESSION.fork0.chnk07.udc993db09d 
2023-04-17 16:49:19 [monitor] Stage exceeded its address space quota (using 566.7, allowed 6G)
2023-04-17 16:49:20 [time] __end__
