2023-04-17 16:49:10 [time] __start__
2023-04-17 16:49:10 [monitor] cgroup memory limit of 137438953472 bytes detected
2023-04-17 16:49:15 [monitor] Process tree:
                                 PID VSZ(mb) RSS(mb) Procs  Read(mb) (calls) Write(mb) (calls) COMMAND
                               61590  231773      10     7         0      67         0       7 /gpfs/share/apps/spaceranger/1.2.1/external/martian/bin/mrjob /gpfs/share/apps/spaceranger/1.2.1/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/spaceranger/1.2.1/mro/rna/stages/analyzer/run_differential_expression main /gpfs/data/yanailab/projects/jw7078/processed_data/359-A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_RNA_COUNTER/SPATIAL_RNA_ANALYZER/RUN_DIFFERENTIAL_EXPRESSION/fork0/chnk09-udc993db09d /gpfs/data/yanailab/projects/jw7078/processed_data/359-A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_RNA_COUNTER/SPATIAL_RNA_ANALYZER/RUN_DIFFERENTIAL_EXPRESSION/fork0/chnk09-udc993db09d/files /gpfs/data/yanailab/projects/jw7078/processed_data/359-A1/journal/SPATIAL_RNA_COUNTER_CS.SPATIAL_RNA_COUNTER.SPATIAL_RNA_ANALYZER.RUN_DIFFERENTIAL_EXPRESSION.fork0.chnk09.udc993db09d 
                               61598  309948     198    28         0    4205         0      82   python /gpfs/share/apps/spaceranger/1.2.1/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/spaceranger/1.2.1/mro/rna/stages/analyzer/run_differential_expression main /gpfs/data/yanailab/projects/jw7078/processed_data/359-A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_RNA_COUNTER/SPATIAL_RNA_ANALYZER/RUN_DIFFERENTIAL_EXPRESSION/fork0/chnk09-udc993db09d /gpfs/data/yanailab/projects/jw7078/processed_data/359-A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_RNA_COUNTER/SPATIAL_RNA_ANALYZER/RUN_DIFFERENTIAL_EXPRESSION/fork0/chnk09-udc993db09d/files /gpfs/data/yanailab/projects/jw7078/processed_data/359-A1/journal/SPATIAL_RNA_COUNTER_CS.SPATIAL_RNA_COUNTER.SPATIAL_RNA_ANALYZER.RUN_DIFFERENTIAL_EXPRESSION.fork0.chnk09.udc993db09d 
2023-04-17 16:49:15 [monitor] Stage exceeded its address space quota (using 529.0, allowed 6G)
2023-04-17 16:49:20 [monitor] Process tree:
                                 PID VSZ(mb) RSS(mb) Procs  Read(mb) (calls) Write(mb) (calls) COMMAND
                               61590  231773      10     7         0     151         0       9 /gpfs/share/apps/spaceranger/1.2.1/external/martian/bin/mrjob /gpfs/share/apps/spaceranger/1.2.1/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/spaceranger/1.2.1/mro/rna/stages/analyzer/run_differential_expression main /gpfs/data/yanailab/projects/jw7078/processed_data/359-A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_RNA_COUNTER/SPATIAL_RNA_ANALYZER/RUN_DIFFERENTIAL_EXPRESSION/fork0/chnk09-udc993db09d /gpfs/data/yanailab/projects/jw7078/processed_data/359-A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_RNA_COUNTER/SPATIAL_RNA_ANALYZER/RUN_DIFFERENTIAL_EXPRESSION/fork0/chnk09-udc993db09d/files /gpfs/data/yanailab/projects/jw7078/processed_data/359-A1/journal/SPATIAL_RNA_COUNTER_CS.SPATIAL_RNA_COUNTER.SPATIAL_RNA_ANALYZER.RUN_DIFFERENTIAL_EXPRESSION.fork0.chnk09.udc993db09d 
                               61598  309952     202    28         0    4205         0      84   python /gpfs/share/apps/spaceranger/1.2.1/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/spaceranger/1.2.1/mro/rna/stages/analyzer/run_differential_expression main /gpfs/data/yanailab/projects/jw7078/processed_data/359-A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_RNA_COUNTER/SPATIAL_RNA_ANALYZER/RUN_DIFFERENTIAL_EXPRESSION/fork0/chnk09-udc993db09d /gpfs/data/yanailab/projects/jw7078/processed_data/359-A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_RNA_COUNTER/SPATIAL_RNA_ANALYZER/RUN_DIFFERENTIAL_EXPRESSION/fork0/chnk09-udc993db09d/files /gpfs/data/yanailab/projects/jw7078/processed_data/359-A1/journal/SPATIAL_RNA_COUNTER_CS.SPATIAL_RNA_COUNTER.SPATIAL_RNA_ANALYZER.RUN_DIFFERENTIAL_EXPRESSION.fork0.chnk09.udc993db09d 
2023-04-17 16:49:20 [monitor] Stage exceeded its address space quota (using 529.0, allowed 6G)
2023-04-17 16:49:25 [monitor] Process tree:
                                 PID VSZ(mb) RSS(mb) Procs  Read(mb) (calls) Write(mb) (calls) COMMAND
                               61590  231773      10     7         0     235         0      11 /gpfs/share/apps/spaceranger/1.2.1/external/martian/bin/mrjob /gpfs/share/apps/spaceranger/1.2.1/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/spaceranger/1.2.1/mro/rna/stages/analyzer/run_differential_expression main /gpfs/data/yanailab/projects/jw7078/processed_data/359-A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_RNA_COUNTER/SPATIAL_RNA_ANALYZER/RUN_DIFFERENTIAL_EXPRESSION/fork0/chnk09-udc993db09d /gpfs/data/yanailab/projects/jw7078/processed_data/359-A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_RNA_COUNTER/SPATIAL_RNA_ANALYZER/RUN_DIFFERENTIAL_EXPRESSION/fork0/chnk09-udc993db09d/files /gpfs/data/yanailab/projects/jw7078/processed_data/359-A1/journal/SPATIAL_RNA_COUNTER_CS.SPATIAL_RNA_COUNTER.SPATIAL_RNA_ANALYZER.RUN_DIFFERENTIAL_EXPRESSION.fork0.chnk09.udc993db09d 
                               61598  309953     203    28         0    4205         0      88   python /gpfs/share/apps/spaceranger/1.2.1/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/spaceranger/1.2.1/mro/rna/stages/analyzer/run_differential_expression main /gpfs/data/yanailab/projects/jw7078/processed_data/359-A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_RNA_COUNTER/SPATIAL_RNA_ANALYZER/RUN_DIFFERENTIAL_EXPRESSION/fork0/chnk09-udc993db09d /gpfs/data/yanailab/projects/jw7078/processed_data/359-A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_RNA_COUNTER/SPATIAL_RNA_ANALYZER/RUN_DIFFERENTIAL_EXPRESSION/fork0/chnk09-udc993db09d/files /gpfs/data/yanailab/projects/jw7078/processed_data/359-A1/journal/SPATIAL_RNA_COUNTER_CS.SPATIAL_RNA_COUNTER.SPATIAL_RNA_ANALYZER.RUN_DIFFERENTIAL_EXPRESSION.fork0.chnk09.udc993db09d 
2023-04-17 16:49:25 [monitor] Stage exceeded its address space quota (using 529.0, allowed 6G)
2023-04-17 16:49:30 [monitor] Process tree:
                                 PID VSZ(mb) RSS(mb) Procs  Read(mb) (calls) Write(mb) (calls) COMMAND
                               61590  231773      10     7         0     319         0      13 /gpfs/share/apps/spaceranger/1.2.1/external/martian/bin/mrjob /gpfs/share/apps/spaceranger/1.2.1/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/spaceranger/1.2.1/mro/rna/stages/analyzer/run_differential_expression main /gpfs/data/yanailab/projects/jw7078/processed_data/359-A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_RNA_COUNTER/SPATIAL_RNA_ANALYZER/RUN_DIFFERENTIAL_EXPRESSION/fork0/chnk09-udc993db09d /gpfs/data/yanailab/projects/jw7078/processed_data/359-A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_RNA_COUNTER/SPATIAL_RNA_ANALYZER/RUN_DIFFERENTIAL_EXPRESSION/fork0/chnk09-udc993db09d/files /gpfs/data/yanailab/projects/jw7078/processed_data/359-A1/journal/SPATIAL_RNA_COUNTER_CS.SPATIAL_RNA_COUNTER.SPATIAL_RNA_ANALYZER.RUN_DIFFERENTIAL_EXPRESSION.fork0.chnk09.udc993db09d 
                               61598  309955     206    28         0    4205         0      92   python /gpfs/share/apps/spaceranger/1.2.1/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/spaceranger/1.2.1/mro/rna/stages/analyzer/run_differential_expression main /gpfs/data/yanailab/projects/jw7078/processed_data/359-A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_RNA_COUNTER/SPATIAL_RNA_ANALYZER/RUN_DIFFERENTIAL_EXPRESSION/fork0/chnk09-udc993db09d /gpfs/data/yanailab/projects/jw7078/processed_data/359-A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_RNA_COUNTER/SPATIAL_RNA_ANALYZER/RUN_DIFFERENTIAL_EXPRESSION/fork0/chnk09-udc993db09d/files /gpfs/data/yanailab/projects/jw7078/processed_data/359-A1/journal/SPATIAL_RNA_COUNTER_CS.SPATIAL_RNA_COUNTER.SPATIAL_RNA_ANALYZER.RUN_DIFFERENTIAL_EXPRESSION.fork0.chnk09.udc993db09d 
2023-04-17 16:49:30 [monitor] Stage exceeded its address space quota (using 529.0, allowed 6G)
2023-04-17 16:49:35 [monitor] Process tree:
                                 PID VSZ(mb) RSS(mb) Procs  Read(mb) (calls) Write(mb) (calls) COMMAND
                               61590  231773      10     7         0     403         0      15 /gpfs/share/apps/spaceranger/1.2.1/external/martian/bin/mrjob /gpfs/share/apps/spaceranger/1.2.1/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/spaceranger/1.2.1/mro/rna/stages/analyzer/run_differential_expression main /gpfs/data/yanailab/projects/jw7078/processed_data/359-A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_RNA_COUNTER/SPATIAL_RNA_ANALYZER/RUN_DIFFERENTIAL_EXPRESSION/fork0/chnk09-udc993db09d /gpfs/data/yanailab/projects/jw7078/processed_data/359-A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_RNA_COUNTER/SPATIAL_RNA_ANALYZER/RUN_DIFFERENTIAL_EXPRESSION/fork0/chnk09-udc993db09d/files /gpfs/data/yanailab/projects/jw7078/processed_data/359-A1/journal/SPATIAL_RNA_COUNTER_CS.SPATIAL_RNA_COUNTER.SPATIAL_RNA_ANALYZER.RUN_DIFFERENTIAL_EXPRESSION.fork0.chnk09.udc993db09d 
                               61598  309956     207    28         0    4205         0      94   python /gpfs/share/apps/spaceranger/1.2.1/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/spaceranger/1.2.1/mro/rna/stages/analyzer/run_differential_expression main /gpfs/data/yanailab/projects/jw7078/processed_data/359-A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_RNA_COUNTER/SPATIAL_RNA_ANALYZER/RUN_DIFFERENTIAL_EXPRESSION/fork0/chnk09-udc993db09d /gpfs/data/yanailab/projects/jw7078/processed_data/359-A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_RNA_COUNTER/SPATIAL_RNA_ANALYZER/RUN_DIFFERENTIAL_EXPRESSION/fork0/chnk09-udc993db09d/files /gpfs/data/yanailab/projects/jw7078/processed_data/359-A1/journal/SPATIAL_RNA_COUNTER_CS.SPATIAL_RNA_COUNTER.SPATIAL_RNA_ANALYZER.RUN_DIFFERENTIAL_EXPRESSION.fork0.chnk09.udc993db09d 
2023-04-17 16:49:35 [monitor] Stage exceeded its address space quota (using 529.0, allowed 6G)
2023-04-17 16:49:40 [monitor] Process tree:
                                 PID VSZ(mb) RSS(mb) Procs  Read(mb) (calls) Write(mb) (calls) COMMAND
                               61590  231773      10     7         0     487         0      17 /gpfs/share/apps/spaceranger/1.2.1/external/martian/bin/mrjob /gpfs/share/apps/spaceranger/1.2.1/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/spaceranger/1.2.1/mro/rna/stages/analyzer/run_differential_expression main /gpfs/data/yanailab/projects/jw7078/processed_data/359-A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_RNA_COUNTER/SPATIAL_RNA_ANALYZER/RUN_DIFFERENTIAL_EXPRESSION/fork0/chnk09-udc993db09d /gpfs/data/yanailab/projects/jw7078/processed_data/359-A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_RNA_COUNTER/SPATIAL_RNA_ANALYZER/RUN_DIFFERENTIAL_EXPRESSION/fork0/chnk09-udc993db09d/files /gpfs/data/yanailab/projects/jw7078/processed_data/359-A1/journal/SPATIAL_RNA_COUNTER_CS.SPATIAL_RNA_COUNTER.SPATIAL_RNA_ANALYZER.RUN_DIFFERENTIAL_EXPRESSION.fork0.chnk09.udc993db09d 
                               61598  309932     182    28         0    4205         0      96   python /gpfs/share/apps/spaceranger/1.2.1/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/spaceranger/1.2.1/mro/rna/stages/analyzer/run_differential_expression main /gpfs/data/yanailab/projects/jw7078/processed_data/359-A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_RNA_COUNTER/SPATIAL_RNA_ANALYZER/RUN_DIFFERENTIAL_EXPRESSION/fork0/chnk09-udc993db09d /gpfs/data/yanailab/projects/jw7078/processed_data/359-A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_RNA_COUNTER/SPATIAL_RNA_ANALYZER/RUN_DIFFERENTIAL_EXPRESSION/fork0/chnk09-udc993db09d/files /gpfs/data/yanailab/projects/jw7078/processed_data/359-A1/journal/SPATIAL_RNA_COUNTER_CS.SPATIAL_RNA_COUNTER.SPATIAL_RNA_ANALYZER.RUN_DIFFERENTIAL_EXPRESSION.fork0.chnk09.udc993db09d 
2023-04-17 16:49:40 [monitor] Stage exceeded its address space quota (using 529.0, allowed 6G)
2023-04-17 16:49:43 [time] __end__
