2023-04-17 16:48:10 [time] __start__
2023-04-17 16:48:10 [monitor] cgroup memory limit of 137438953472 bytes detected
2023-04-17 16:48:15 [monitor] Process tree:
                                 PID VSZ(mb) RSS(mb) Procs  Read(mb) (calls) Write(mb) (calls) COMMAND
                               60794  231773       3     7         0      54         0       7 /gpfs/share/apps/spaceranger/1.2.1/external/martian/bin/mrjob /gpfs/share/apps/spaceranger/1.2.1/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/spaceranger/1.2.1/mro/rna/stages/analyzer/run_graph_clustering join /gpfs/data/yanailab/projects/jw7078/processed_data/359-A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_RNA_COUNTER/SPATIAL_RNA_ANALYZER/RUN_GRAPH_CLUSTERING/fork0/join-udc993db085 /gpfs/data/yanailab/projects/jw7078/processed_data/359-A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_RNA_COUNTER/SPATIAL_RNA_ANALYZER/RUN_GRAPH_CLUSTERING/fork0/join-udc993db085/files /gpfs/data/yanailab/projects/jw7078/processed_data/359-A1/journal/SPATIAL_RNA_COUNTER_CS.SPATIAL_RNA_COUNTER.SPATIAL_RNA_ANALYZER.RUN_GRAPH_CLUSTERING.fork0.udc993db085 
                               60801  308552     108     9         0    3997         0   63386   python /gpfs/share/apps/spaceranger/1.2.1/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/spaceranger/1.2.1/mro/rna/stages/analyzer/run_graph_clustering join /gpfs/data/yanailab/projects/jw7078/processed_data/359-A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_RNA_COUNTER/SPATIAL_RNA_ANALYZER/RUN_GRAPH_CLUSTERING/fork0/join-udc993db085 /gpfs/data/yanailab/projects/jw7078/processed_data/359-A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_RNA_COUNTER/SPATIAL_RNA_ANALYZER/RUN_GRAPH_CLUSTERING/fork0/join-udc993db085/files /gpfs/data/yanailab/projects/jw7078/processed_data/359-A1/journal/SPATIAL_RNA_COUNTER_CS.SPATIAL_RNA_COUNTER.SPATIAL_RNA_ANALYZER.RUN_GRAPH_CLUSTERING.fork0.udc993db085 
                               60881      15       6     1         0   61830         0       0     convert -i - -o /gpfs/data/yanailab/projects/jw7078/processed_data/359-A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_RNA_COUNTER/SPATIAL_RNA_ANALYZER/RUN_GRAPH_CLUSTERING/fork0/join-udc993db085/files/matrix.bin 
2023-04-17 16:48:15 [monitor] Stage exceeded its address space quota (using 527.7, allowed 6G)
2023-04-17 16:48:15 [time] __end__
