2023-04-17 16:30:32 [time] __start__
2023-04-17 16:30:32 [monitor] cgroup memory limit of 137438953472 bytes detected
2023-04-17 16:30:37 [monitor] Process tree:
                                 PID VSZ(mb) RSS(mb) Procs  Read(mb) (calls) Write(mb) (calls) COMMAND
                               56696  270340      12     8         0      40         0       7 /gpfs/share/apps/spaceranger/1.2.1/external/martian/bin/mrjob /gpfs/share/apps/spaceranger/1.2.1/lib/bin/cr_lib martian write_gene_index main /gpfs/data/yanailab/projects/jw7078/processed_data/359-A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_RNA_COUNTER/WRITE_GENE_INDEX/fork0/chnk0-udc993dac68 /gpfs/data/yanailab/projects/jw7078/processed_data/359-A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_RNA_COUNTER/WRITE_GENE_INDEX/fork0/chnk0-udc993dac68/files /gpfs/data/yanailab/projects/jw7078/processed_data/359-A1/journal/SPATIAL_RNA_COUNTER_CS.SPATIAL_RNA_COUNTER.WRITE_GENE_INDEX.fork0.chnk0.udc993dac68 
                               56723     342     310     1         0  111424         0       3   /gpfs/share/apps/spaceranger/1.2.1/lib/bin/cr_lib martian write_gene_index main /gpfs/data/yanailab/projects/jw7078/processed_data/359-A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_RNA_COUNTER/WRITE_GENE_INDEX/fork0/chnk0-udc993dac68 /gpfs/data/yanailab/projects/jw7078/processed_data/359-A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_RNA_COUNTER/WRITE_GENE_INDEX/fork0/chnk0-udc993dac68/files /gpfs/data/yanailab/projects/jw7078/processed_data/359-A1/journal/SPATIAL_RNA_COUNTER_CS.SPATIAL_RNA_COUNTER.WRITE_GENE_INDEX.fork0.chnk0.udc993dac68 
2023-04-17 16:30:37 [monitor] Stage exceeded its address space quota (using 264.3, allowed 9G)
2023-04-17 16:30:42 [monitor] Process tree:
                                 PID VSZ(mb) RSS(mb) Procs  Read(mb) (calls) Write(mb) (calls) COMMAND
                               56696  270340      12     8         0      71         0       9 /gpfs/share/apps/spaceranger/1.2.1/external/martian/bin/mrjob /gpfs/share/apps/spaceranger/1.2.1/lib/bin/cr_lib martian write_gene_index main /gpfs/data/yanailab/projects/jw7078/processed_data/359-A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_RNA_COUNTER/WRITE_GENE_INDEX/fork0/chnk0-udc993dac68 /gpfs/data/yanailab/projects/jw7078/processed_data/359-A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_RNA_COUNTER/WRITE_GENE_INDEX/fork0/chnk0-udc993dac68/files /gpfs/data/yanailab/projects/jw7078/processed_data/359-A1/journal/SPATIAL_RNA_COUNTER_CS.SPATIAL_RNA_COUNTER.WRITE_GENE_INDEX.fork0.chnk0.udc993dac68 
                               56723     479     447     1         0  603635         0       3   /gpfs/share/apps/spaceranger/1.2.1/lib/bin/cr_lib martian write_gene_index main /gpfs/data/yanailab/projects/jw7078/processed_data/359-A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_RNA_COUNTER/WRITE_GENE_INDEX/fork0/chnk0-udc993dac68 /gpfs/data/yanailab/projects/jw7078/processed_data/359-A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_RNA_COUNTER/WRITE_GENE_INDEX/fork0/chnk0-udc993dac68/files /gpfs/data/yanailab/projects/jw7078/processed_data/359-A1/journal/SPATIAL_RNA_COUNTER_CS.SPATIAL_RNA_COUNTER.WRITE_GENE_INDEX.fork0.chnk0.udc993dac68 
2023-04-17 16:30:42 [monitor] Stage exceeded its address space quota (using 264.5, allowed 9G)
2023-04-17 16:30:47 [monitor] Process tree:
                                 PID VSZ(mb) RSS(mb) Procs  Read(mb) (calls) Write(mb) (calls) COMMAND
                               56696  270340      12     8         0     102         0      11 /gpfs/share/apps/spaceranger/1.2.1/external/martian/bin/mrjob /gpfs/share/apps/spaceranger/1.2.1/lib/bin/cr_lib martian write_gene_index main /gpfs/data/yanailab/projects/jw7078/processed_data/359-A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_RNA_COUNTER/WRITE_GENE_INDEX/fork0/chnk0-udc993dac68 /gpfs/data/yanailab/projects/jw7078/processed_data/359-A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_RNA_COUNTER/WRITE_GENE_INDEX/fork0/chnk0-udc993dac68/files /gpfs/data/yanailab/projects/jw7078/processed_data/359-A1/journal/SPATIAL_RNA_COUNTER_CS.SPATIAL_RNA_COUNTER.WRITE_GENE_INDEX.fork0.chnk0.udc993dac68 
                               56723    1754    1666     1         0  921086         0       3   /gpfs/share/apps/spaceranger/1.2.1/lib/bin/cr_lib martian write_gene_index main /gpfs/data/yanailab/projects/jw7078/processed_data/359-A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_RNA_COUNTER/WRITE_GENE_INDEX/fork0/chnk0-udc993dac68 /gpfs/data/yanailab/projects/jw7078/processed_data/359-A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_RNA_COUNTER/WRITE_GENE_INDEX/fork0/chnk0-udc993dac68/files /gpfs/data/yanailab/projects/jw7078/processed_data/359-A1/journal/SPATIAL_RNA_COUNTER_CS.SPATIAL_RNA_COUNTER.WRITE_GENE_INDEX.fork0.chnk0.udc993dac68 
2023-04-17 16:30:47 [monitor] Stage exceeded its address space quota (using 265.7, allowed 9G)
2023-04-17 16:30:49 [time] __end__
