@include "rna/_cr_lib_stages.mro"

call WRITE_BARCODE_SUMMARY(
    unique_gem_groups = [1],
    bc_umi_info       = [
        "/gpfs/data/yanailab/projects/jw7078/processed_data/359-A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_RNA_COUNTER/_BASIC_SPATIAL_RNA_COUNTER/_MATRIX_COMPUTER/ALIGN_AND_COUNT/fork0/chnk0-udc993dad9f/files/bc_umi_info.bui",
        "/gpfs/data/yanailab/projects/jw7078/processed_data/359-A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_RNA_COUNTER/_BASIC_SPATIAL_RNA_COUNTER/_MATRIX_COMPUTER/ALIGN_AND_COUNT/fork0/chnk1-udc993dad9f/files/bc_umi_info.bui",
        "/gpfs/data/yanailab/projects/jw7078/processed_data/359-A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_RNA_COUNTER/_BASIC_SPATIAL_RNA_COUNTER/_MATRIX_COMPUTER/ALIGN_AND_COUNT/fork0/chnk2-udc993dad9f/files/bc_umi_info.bui",
        "/gpfs/data/yanailab/projects/jw7078/processed_data/359-A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_RNA_COUNTER/_BASIC_SPATIAL_RNA_COUNTER/_MATRIX_COMPUTER/ALIGN_AND_COUNT/fork0/chnk3-udc993dad9f/files/bc_umi_info.bui",
        "/gpfs/data/yanailab/projects/jw7078/processed_data/359-A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_RNA_COUNTER/_BASIC_SPATIAL_RNA_COUNTER/_MATRIX_COMPUTER/ALIGN_AND_COUNT/fork0/chnk4-udc993dad9f/files/bc_umi_info.bui",
    ],
    feature_reference = "/gpfs/data/yanailab/projects/jw7078/processed_data/359-A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_RNA_COUNTER/_BASIC_SPATIAL_RNA_COUNTER/_MATRIX_COMPUTER/MAKE_SHARD/fork0/split-udc993dac80/files/feature_reference.frf.bincode",
    barcode_whitelist = "visium-v1",
)
