2023-04-17 16:37:18 [time] __start__
2023-04-17 16:37:18 [monitor] cgroup memory limit of 137438953472 bytes detected
2023-04-17 16:37:18 [info] Running cloupetiler: cloupetiler /gpfs/home/jw7078/ST-399/ST-399-A1.jpg /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/SPATIAL_RNA_COUNTER_CS/CLOUPE_TILE_IMAGES/fork0/join-ue5873dadfe/tmp/tmpj5Mcji tiles_0_0 --tilesize 512 --page 0
2023-04-17 16:37:23 [monitor] Process tree:
                                 PID VSZ(mb) RSS(mb) Procs  Read(mb) (calls) Write(mb) (calls) COMMAND
                               59025  308907      14     9         0      52         0       7 /gpfs/share/apps/spaceranger/1.2.1/external/martian/bin/mrjob /gpfs/share/apps/spaceranger/1.2.1/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/spaceranger/1.2.1/mro/rna/stages/cloupe/cloupe_tile_images join /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/SPATIAL_RNA_COUNTER_CS/CLOUPE_TILE_IMAGES/fork0/join-ue5873dadfe /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/SPATIAL_RNA_COUNTER_CS/CLOUPE_TILE_IMAGES/fork0/join-ue5873dadfe/files /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/journal/SPATIAL_RNA_COUNTER_CS.CLOUPE_TILE_IMAGES.fork0.ue5873dadfe 
                               59034     339      30     1         0     853         0      41   python /gpfs/share/apps/spaceranger/1.2.1/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/spaceranger/1.2.1/mro/rna/stages/cloupe/cloupe_tile_images join /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/SPATIAL_RNA_COUNTER_CS/CLOUPE_TILE_IMAGES/fork0/join-ue5873dadfe /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/SPATIAL_RNA_COUNTER_CS/CLOUPE_TILE_IMAGES/fork0/join-ue5873dadfe/files /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/journal/SPATIAL_RNA_COUNTER_CS.CLOUPE_TILE_IMAGES.fork0.ue5873dadfe 
                               59044  232176     362     7         0    9796         0       0     cloupetiler /gpfs/home/jw7078/ST-399/ST-399-A1.jpg /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/SPATIAL_RNA_COUNTER_CS/CLOUPE_TILE_IMAGES/fork0/join-ue5873dadfe/tmp/tmpj5Mcji tiles_0_0 --tilesize 512 --page 0 
2023-04-17 16:37:23 [monitor] Stage exceeded its address space quota (using 528.7, allowed 10G)
2023-04-17 16:37:28 [monitor] Process tree:
                                 PID VSZ(mb) RSS(mb) Procs  Read(mb) (calls) Write(mb) (calls) COMMAND
                               59025  308907      14     9         0     111         0       9 /gpfs/share/apps/spaceranger/1.2.1/external/martian/bin/mrjob /gpfs/share/apps/spaceranger/1.2.1/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/spaceranger/1.2.1/mro/rna/stages/cloupe/cloupe_tile_images join /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/SPATIAL_RNA_COUNTER_CS/CLOUPE_TILE_IMAGES/fork0/join-ue5873dadfe /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/SPATIAL_RNA_COUNTER_CS/CLOUPE_TILE_IMAGES/fork0/join-ue5873dadfe/files /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/journal/SPATIAL_RNA_COUNTER_CS.CLOUPE_TILE_IMAGES.fork0.ue5873dadfe 
                               59034     339      30     1         0     853         0      41   python /gpfs/share/apps/spaceranger/1.2.1/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/spaceranger/1.2.1/mro/rna/stages/cloupe/cloupe_tile_images join /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/SPATIAL_RNA_COUNTER_CS/CLOUPE_TILE_IMAGES/fork0/join-ue5873dadfe /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/SPATIAL_RNA_COUNTER_CS/CLOUPE_TILE_IMAGES/fork0/join-ue5873dadfe/files /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/journal/SPATIAL_RNA_COUNTER_CS.CLOUPE_TILE_IMAGES.fork0.ue5873dadfe 
                               59044  270745     461     8         0   10214         0    1516     cloupetiler /gpfs/home/jw7078/ST-399/ST-399-A1.jpg /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/SPATIAL_RNA_COUNTER_CS/CLOUPE_TILE_IMAGES/fork0/join-ue5873dadfe/tmp/tmpj5Mcji tiles_0_0 --tilesize 512 --page 0 
2023-04-17 16:37:28 [monitor] Stage exceeded its address space quota (using 566.4, allowed 10G)
2023-04-17 16:37:33 [monitor] Process tree:
                                 PID VSZ(mb) RSS(mb) Procs  Read(mb) (calls) Write(mb) (calls) COMMAND
                               59025  308907      14     9         0     171         0      11 /gpfs/share/apps/spaceranger/1.2.1/external/martian/bin/mrjob /gpfs/share/apps/spaceranger/1.2.1/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/spaceranger/1.2.1/mro/rna/stages/cloupe/cloupe_tile_images join /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/SPATIAL_RNA_COUNTER_CS/CLOUPE_TILE_IMAGES/fork0/join-ue5873dadfe /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/SPATIAL_RNA_COUNTER_CS/CLOUPE_TILE_IMAGES/fork0/join-ue5873dadfe/files /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/journal/SPATIAL_RNA_COUNTER_CS.CLOUPE_TILE_IMAGES.fork0.ue5873dadfe 
                               59034     339      30     1         0     853         0      41   python /gpfs/share/apps/spaceranger/1.2.1/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/spaceranger/1.2.1/mro/rna/stages/cloupe/cloupe_tile_images join /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/SPATIAL_RNA_COUNTER_CS/CLOUPE_TILE_IMAGES/fork0/join-ue5873dadfe /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/SPATIAL_RNA_COUNTER_CS/CLOUPE_TILE_IMAGES/fork0/join-ue5873dadfe/files /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/journal/SPATIAL_RNA_COUNTER_CS.CLOUPE_TILE_IMAGES.fork0.ue5873dadfe 
                               59044  270879     588     8         0   10214         0    2767     cloupetiler /gpfs/home/jw7078/ST-399/ST-399-A1.jpg /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/SPATIAL_RNA_COUNTER_CS/CLOUPE_TILE_IMAGES/fork0/join-ue5873dadfe/tmp/tmpj5Mcji tiles_0_0 --tilesize 512 --page 0 
2023-04-17 16:37:33 [monitor] Stage exceeded its address space quota (using 566.5, allowed 10G)
2023-04-17 16:37:38 [monitor] Process tree:
                                 PID VSZ(mb) RSS(mb) Procs  Read(mb) (calls) Write(mb) (calls) COMMAND
                               59025  308907      14     9         0     231         0      13 /gpfs/share/apps/spaceranger/1.2.1/external/martian/bin/mrjob /gpfs/share/apps/spaceranger/1.2.1/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/spaceranger/1.2.1/mro/rna/stages/cloupe/cloupe_tile_images join /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/SPATIAL_RNA_COUNTER_CS/CLOUPE_TILE_IMAGES/fork0/join-ue5873dadfe /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/SPATIAL_RNA_COUNTER_CS/CLOUPE_TILE_IMAGES/fork0/join-ue5873dadfe/files /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/journal/SPATIAL_RNA_COUNTER_CS.CLOUPE_TILE_IMAGES.fork0.ue5873dadfe 
                               59034     339      30     1         0     853         0      41   python /gpfs/share/apps/spaceranger/1.2.1/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/spaceranger/1.2.1/mro/rna/stages/cloupe/cloupe_tile_images join /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/SPATIAL_RNA_COUNTER_CS/CLOUPE_TILE_IMAGES/fork0/join-ue5873dadfe /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/SPATIAL_RNA_COUNTER_CS/CLOUPE_TILE_IMAGES/fork0/join-ue5873dadfe/files /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/journal/SPATIAL_RNA_COUNTER_CS.CLOUPE_TILE_IMAGES.fork0.ue5873dadfe 
                               59044  271014     711     8         0   10214         0    3850     cloupetiler /gpfs/home/jw7078/ST-399/ST-399-A1.jpg /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/SPATIAL_RNA_COUNTER_CS/CLOUPE_TILE_IMAGES/fork0/join-ue5873dadfe/tmp/tmpj5Mcji tiles_0_0 --tilesize 512 --page 0 
2023-04-17 16:37:38 [monitor] Stage exceeded its address space quota (using 566.7, allowed 10G)
2023-04-17 16:37:43 [monitor] Process tree:
                                 PID VSZ(mb) RSS(mb) Procs  Read(mb) (calls) Write(mb) (calls) COMMAND
                               59025  308907      14     9         0     291         0      15 /gpfs/share/apps/spaceranger/1.2.1/external/martian/bin/mrjob /gpfs/share/apps/spaceranger/1.2.1/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/spaceranger/1.2.1/mro/rna/stages/cloupe/cloupe_tile_images join /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/SPATIAL_RNA_COUNTER_CS/CLOUPE_TILE_IMAGES/fork0/join-ue5873dadfe /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/SPATIAL_RNA_COUNTER_CS/CLOUPE_TILE_IMAGES/fork0/join-ue5873dadfe/files /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/journal/SPATIAL_RNA_COUNTER_CS.CLOUPE_TILE_IMAGES.fork0.ue5873dadfe 
                               59034     339      30     1         0     853         0      41   python /gpfs/share/apps/spaceranger/1.2.1/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/spaceranger/1.2.1/mro/rna/stages/cloupe/cloupe_tile_images join /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/SPATIAL_RNA_COUNTER_CS/CLOUPE_TILE_IMAGES/fork0/join-ue5873dadfe /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/SPATIAL_RNA_COUNTER_CS/CLOUPE_TILE_IMAGES/fork0/join-ue5873dadfe/files /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/journal/SPATIAL_RNA_COUNTER_CS.CLOUPE_TILE_IMAGES.fork0.ue5873dadfe 
                               59044  271016     714     8         0   10214         0    5023     cloupetiler /gpfs/home/jw7078/ST-399/ST-399-A1.jpg /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/SPATIAL_RNA_COUNTER_CS/CLOUPE_TILE_IMAGES/fork0/join-ue5873dadfe/tmp/tmpj5Mcji tiles_0_0 --tilesize 512 --page 0 
2023-04-17 16:37:43 [monitor] Stage exceeded its address space quota (using 566.7, allowed 10G)
2023-04-17 16:37:48 [monitor] Process tree:
                                 PID VSZ(mb) RSS(mb) Procs  Read(mb) (calls) Write(mb) (calls) COMMAND
                               59025  308907      14     9         0     351         0      17 /gpfs/share/apps/spaceranger/1.2.1/external/martian/bin/mrjob /gpfs/share/apps/spaceranger/1.2.1/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/spaceranger/1.2.1/mro/rna/stages/cloupe/cloupe_tile_images join /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/SPATIAL_RNA_COUNTER_CS/CLOUPE_TILE_IMAGES/fork0/join-ue5873dadfe /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/SPATIAL_RNA_COUNTER_CS/CLOUPE_TILE_IMAGES/fork0/join-ue5873dadfe/files /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/journal/SPATIAL_RNA_COUNTER_CS.CLOUPE_TILE_IMAGES.fork0.ue5873dadfe 
                               59034     339      30     1         0     853         0      41   python /gpfs/share/apps/spaceranger/1.2.1/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/spaceranger/1.2.1/mro/rna/stages/cloupe/cloupe_tile_images join /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/SPATIAL_RNA_COUNTER_CS/CLOUPE_TILE_IMAGES/fork0/join-ue5873dadfe /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/SPATIAL_RNA_COUNTER_CS/CLOUPE_TILE_IMAGES/fork0/join-ue5873dadfe/files /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/journal/SPATIAL_RNA_COUNTER_CS.CLOUPE_TILE_IMAGES.fork0.ue5873dadfe 
                               59044  271016     714     8         0   10214         0    6533     cloupetiler /gpfs/home/jw7078/ST-399/ST-399-A1.jpg /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/SPATIAL_RNA_COUNTER_CS/CLOUPE_TILE_IMAGES/fork0/join-ue5873dadfe/tmp/tmpj5Mcji tiles_0_0 --tilesize 512 --page 0 
2023-04-17 16:37:48 [monitor] Stage exceeded its address space quota (using 566.7, allowed 10G)
2023-04-17 16:37:53 [monitor] Process tree:
                                 PID VSZ(mb) RSS(mb) Procs  Read(mb) (calls) Write(mb) (calls) COMMAND
                               59025  308907      14     9         0     411         0      19 /gpfs/share/apps/spaceranger/1.2.1/external/martian/bin/mrjob /gpfs/share/apps/spaceranger/1.2.1/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/spaceranger/1.2.1/mro/rna/stages/cloupe/cloupe_tile_images join /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/SPATIAL_RNA_COUNTER_CS/CLOUPE_TILE_IMAGES/fork0/join-ue5873dadfe /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/SPATIAL_RNA_COUNTER_CS/CLOUPE_TILE_IMAGES/fork0/join-ue5873dadfe/files /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/journal/SPATIAL_RNA_COUNTER_CS.CLOUPE_TILE_IMAGES.fork0.ue5873dadfe 
                               59034     339      30     1         0     853         0      41   python /gpfs/share/apps/spaceranger/1.2.1/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/spaceranger/1.2.1/mro/rna/stages/cloupe/cloupe_tile_images join /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/SPATIAL_RNA_COUNTER_CS/CLOUPE_TILE_IMAGES/fork0/join-ue5873dadfe /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/SPATIAL_RNA_COUNTER_CS/CLOUPE_TILE_IMAGES/fork0/join-ue5873dadfe/files /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/journal/SPATIAL_RNA_COUNTER_CS.CLOUPE_TILE_IMAGES.fork0.ue5873dadfe 
                               59044  271017     714     8         0   10214         0    8332     cloupetiler /gpfs/home/jw7078/ST-399/ST-399-A1.jpg /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/SPATIAL_RNA_COUNTER_CS/CLOUPE_TILE_IMAGES/fork0/join-ue5873dadfe/tmp/tmpj5Mcji tiles_0_0 --tilesize 512 --page 0 
2023-04-17 16:37:53 [monitor] Stage exceeded its address space quota (using 566.7, allowed 10G)
2023-04-17 16:37:58 [monitor] Process tree:
                                 PID VSZ(mb) RSS(mb) Procs  Read(mb) (calls) Write(mb) (calls) COMMAND
                               59025  308907      14     9         0     471         0      21 /gpfs/share/apps/spaceranger/1.2.1/external/martian/bin/mrjob /gpfs/share/apps/spaceranger/1.2.1/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/spaceranger/1.2.1/mro/rna/stages/cloupe/cloupe_tile_images join /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/SPATIAL_RNA_COUNTER_CS/CLOUPE_TILE_IMAGES/fork0/join-ue5873dadfe /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/SPATIAL_RNA_COUNTER_CS/CLOUPE_TILE_IMAGES/fork0/join-ue5873dadfe/files /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/journal/SPATIAL_RNA_COUNTER_CS.CLOUPE_TILE_IMAGES.fork0.ue5873dadfe 
                               59034     339      30     1         0     853         0      41   python /gpfs/share/apps/spaceranger/1.2.1/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/spaceranger/1.2.1/mro/rna/stages/cloupe/cloupe_tile_images join /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/SPATIAL_RNA_COUNTER_CS/CLOUPE_TILE_IMAGES/fork0/join-ue5873dadfe /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/SPATIAL_RNA_COUNTER_CS/CLOUPE_TILE_IMAGES/fork0/join-ue5873dadfe/files /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/journal/SPATIAL_RNA_COUNTER_CS.CLOUPE_TILE_IMAGES.fork0.ue5873dadfe 
                               59044  271017     714     8         0   10214         0   10217     cloupetiler /gpfs/home/jw7078/ST-399/ST-399-A1.jpg /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/SPATIAL_RNA_COUNTER_CS/CLOUPE_TILE_IMAGES/fork0/join-ue5873dadfe/tmp/tmpj5Mcji tiles_0_0 --tilesize 512 --page 0 
2023-04-17 16:37:58 [monitor] Stage exceeded its address space quota (using 566.7, allowed 10G)
2023-04-17 16:38:03 [monitor] Process tree:
                                 PID VSZ(mb) RSS(mb) Procs  Read(mb) (calls) Write(mb) (calls) COMMAND
                               59025  308907      14     9         0     532         0      23 /gpfs/share/apps/spaceranger/1.2.1/external/martian/bin/mrjob /gpfs/share/apps/spaceranger/1.2.1/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/spaceranger/1.2.1/mro/rna/stages/cloupe/cloupe_tile_images join /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/SPATIAL_RNA_COUNTER_CS/CLOUPE_TILE_IMAGES/fork0/join-ue5873dadfe /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/SPATIAL_RNA_COUNTER_CS/CLOUPE_TILE_IMAGES/fork0/join-ue5873dadfe/files /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/journal/SPATIAL_RNA_COUNTER_CS.CLOUPE_TILE_IMAGES.fork0.ue5873dadfe 
                               59034     339      30     1         0     853         0      41   python /gpfs/share/apps/spaceranger/1.2.1/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/spaceranger/1.2.1/mro/rna/stages/cloupe/cloupe_tile_images join /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/SPATIAL_RNA_COUNTER_CS/CLOUPE_TILE_IMAGES/fork0/join-ue5873dadfe /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/SPATIAL_RNA_COUNTER_CS/CLOUPE_TILE_IMAGES/fork0/join-ue5873dadfe/files /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/journal/SPATIAL_RNA_COUNTER_CS.CLOUPE_TILE_IMAGES.fork0.ue5873dadfe 
                               59044  309585     718     9         0   10214         0   12005     cloupetiler /gpfs/home/jw7078/ST-399/ST-399-A1.jpg /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/SPATIAL_RNA_COUNTER_CS/CLOUPE_TILE_IMAGES/fork0/join-ue5873dadfe/tmp/tmpj5Mcji tiles_0_0 --tilesize 512 --page 0 
2023-04-17 16:38:03 [monitor] Stage exceeded its address space quota (using 604.3, allowed 10G)
2023-04-17 16:38:08 [monitor] Process tree:
                                 PID VSZ(mb) RSS(mb) Procs  Read(mb) (calls) Write(mb) (calls) COMMAND
                               59025  308907      14     9         0     594         0      25 /gpfs/share/apps/spaceranger/1.2.1/external/martian/bin/mrjob /gpfs/share/apps/spaceranger/1.2.1/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/spaceranger/1.2.1/mro/rna/stages/cloupe/cloupe_tile_images join /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/SPATIAL_RNA_COUNTER_CS/CLOUPE_TILE_IMAGES/fork0/join-ue5873dadfe /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/SPATIAL_RNA_COUNTER_CS/CLOUPE_TILE_IMAGES/fork0/join-ue5873dadfe/files /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/journal/SPATIAL_RNA_COUNTER_CS.CLOUPE_TILE_IMAGES.fork0.ue5873dadfe 
                               59034     339      30     1         0     853         0      41   python /gpfs/share/apps/spaceranger/1.2.1/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/spaceranger/1.2.1/mro/rna/stages/cloupe/cloupe_tile_images join /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/SPATIAL_RNA_COUNTER_CS/CLOUPE_TILE_IMAGES/fork0/join-ue5873dadfe /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/SPATIAL_RNA_COUNTER_CS/CLOUPE_TILE_IMAGES/fork0/join-ue5873dadfe/files /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/journal/SPATIAL_RNA_COUNTER_CS.CLOUPE_TILE_IMAGES.fork0.ue5873dadfe 
                               59044  309586     718     9         0   10214         0   13725     cloupetiler /gpfs/home/jw7078/ST-399/ST-399-A1.jpg /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/SPATIAL_RNA_COUNTER_CS/CLOUPE_TILE_IMAGES/fork0/join-ue5873dadfe/tmp/tmpj5Mcji tiles_0_0 --tilesize 512 --page 0 
2023-04-17 16:38:08 [monitor] Stage exceeded its address space quota (using 604.3, allowed 10G)
2023-04-17 16:38:13 [monitor] Process tree:
                                 PID VSZ(mb) RSS(mb) Procs  Read(mb) (calls) Write(mb) (calls) COMMAND
                               59025  308907      14     9         0     656         0      27 /gpfs/share/apps/spaceranger/1.2.1/external/martian/bin/mrjob /gpfs/share/apps/spaceranger/1.2.1/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/spaceranger/1.2.1/mro/rna/stages/cloupe/cloupe_tile_images join /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/SPATIAL_RNA_COUNTER_CS/CLOUPE_TILE_IMAGES/fork0/join-ue5873dadfe /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/SPATIAL_RNA_COUNTER_CS/CLOUPE_TILE_IMAGES/fork0/join-ue5873dadfe/files /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/journal/SPATIAL_RNA_COUNTER_CS.CLOUPE_TILE_IMAGES.fork0.ue5873dadfe 
                               59034     339      30     1         0     853         0      41   python /gpfs/share/apps/spaceranger/1.2.1/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/spaceranger/1.2.1/mro/rna/stages/cloupe/cloupe_tile_images join /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/SPATIAL_RNA_COUNTER_CS/CLOUPE_TILE_IMAGES/fork0/join-ue5873dadfe /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/SPATIAL_RNA_COUNTER_CS/CLOUPE_TILE_IMAGES/fork0/join-ue5873dadfe/files /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/journal/SPATIAL_RNA_COUNTER_CS.CLOUPE_TILE_IMAGES.fork0.ue5873dadfe 
                               59044  309586     718     9         0   10214         0   15408     cloupetiler /gpfs/home/jw7078/ST-399/ST-399-A1.jpg /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/SPATIAL_RNA_COUNTER_CS/CLOUPE_TILE_IMAGES/fork0/join-ue5873dadfe/tmp/tmpj5Mcji tiles_0_0 --tilesize 512 --page 0 
2023-04-17 16:38:13 [monitor] Stage exceeded its address space quota (using 604.3, allowed 10G)
2023-04-17 16:38:18 [monitor] Process tree:
                                 PID VSZ(mb) RSS(mb) Procs  Read(mb) (calls) Write(mb) (calls) COMMAND
                               59025  308907      16     9         0     718         0      29 /gpfs/share/apps/spaceranger/1.2.1/external/martian/bin/mrjob /gpfs/share/apps/spaceranger/1.2.1/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/spaceranger/1.2.1/mro/rna/stages/cloupe/cloupe_tile_images join /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/SPATIAL_RNA_COUNTER_CS/CLOUPE_TILE_IMAGES/fork0/join-ue5873dadfe /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/SPATIAL_RNA_COUNTER_CS/CLOUPE_TILE_IMAGES/fork0/join-ue5873dadfe/files /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/journal/SPATIAL_RNA_COUNTER_CS.CLOUPE_TILE_IMAGES.fork0.ue5873dadfe 
                               59034     339      30     1         0     853         0      41   python /gpfs/share/apps/spaceranger/1.2.1/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/spaceranger/1.2.1/mro/rna/stages/cloupe/cloupe_tile_images join /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/SPATIAL_RNA_COUNTER_CS/CLOUPE_TILE_IMAGES/fork0/join-ue5873dadfe /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/SPATIAL_RNA_COUNTER_CS/CLOUPE_TILE_IMAGES/fork0/join-ue5873dadfe/files /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/journal/SPATIAL_RNA_COUNTER_CS.CLOUPE_TILE_IMAGES.fork0.ue5873dadfe 
                               59044  309587     718     9         0   10214         0   17182     cloupetiler /gpfs/home/jw7078/ST-399/ST-399-A1.jpg /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/SPATIAL_RNA_COUNTER_CS/CLOUPE_TILE_IMAGES/fork0/join-ue5873dadfe/tmp/tmpj5Mcji tiles_0_0 --tilesize 512 --page 0 
2023-04-17 16:38:18 [monitor] Stage exceeded its address space quota (using 604.3, allowed 10G)
2023-04-17 16:38:23 [monitor] Process tree:
                                 PID VSZ(mb) RSS(mb) Procs  Read(mb) (calls) Write(mb) (calls) COMMAND
                               59025  308907      16     9         0     780         0      31 /gpfs/share/apps/spaceranger/1.2.1/external/martian/bin/mrjob /gpfs/share/apps/spaceranger/1.2.1/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/spaceranger/1.2.1/mro/rna/stages/cloupe/cloupe_tile_images join /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/SPATIAL_RNA_COUNTER_CS/CLOUPE_TILE_IMAGES/fork0/join-ue5873dadfe /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/SPATIAL_RNA_COUNTER_CS/CLOUPE_TILE_IMAGES/fork0/join-ue5873dadfe/files /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/journal/SPATIAL_RNA_COUNTER_CS.CLOUPE_TILE_IMAGES.fork0.ue5873dadfe 
                               59034     339      30     1         0     853         0      41   python /gpfs/share/apps/spaceranger/1.2.1/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/spaceranger/1.2.1/mro/rna/stages/cloupe/cloupe_tile_images join /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/SPATIAL_RNA_COUNTER_CS/CLOUPE_TILE_IMAGES/fork0/join-ue5873dadfe /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/SPATIAL_RNA_COUNTER_CS/CLOUPE_TILE_IMAGES/fork0/join-ue5873dadfe/files /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/journal/SPATIAL_RNA_COUNTER_CS.CLOUPE_TILE_IMAGES.fork0.ue5873dadfe 
                               59044  309587     718     9         0   10214         0   19009     cloupetiler /gpfs/home/jw7078/ST-399/ST-399-A1.jpg /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/SPATIAL_RNA_COUNTER_CS/CLOUPE_TILE_IMAGES/fork0/join-ue5873dadfe/tmp/tmpj5Mcji tiles_0_0 --tilesize 512 --page 0 
2023-04-17 16:38:23 [monitor] Stage exceeded its address space quota (using 604.3, allowed 10G)
2023-04-17 16:38:28 [monitor] Process tree:
                                 PID VSZ(mb) RSS(mb) Procs  Read(mb) (calls) Write(mb) (calls) COMMAND
                               59025  308907      16     9         0     842         0      33 /gpfs/share/apps/spaceranger/1.2.1/external/martian/bin/mrjob /gpfs/share/apps/spaceranger/1.2.1/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/spaceranger/1.2.1/mro/rna/stages/cloupe/cloupe_tile_images join /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/SPATIAL_RNA_COUNTER_CS/CLOUPE_TILE_IMAGES/fork0/join-ue5873dadfe /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/SPATIAL_RNA_COUNTER_CS/CLOUPE_TILE_IMAGES/fork0/join-ue5873dadfe/files /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/journal/SPATIAL_RNA_COUNTER_CS.CLOUPE_TILE_IMAGES.fork0.ue5873dadfe 
                               59034     339      30     1         0     853         0      41   python /gpfs/share/apps/spaceranger/1.2.1/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/spaceranger/1.2.1/mro/rna/stages/cloupe/cloupe_tile_images join /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/SPATIAL_RNA_COUNTER_CS/CLOUPE_TILE_IMAGES/fork0/join-ue5873dadfe /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/SPATIAL_RNA_COUNTER_CS/CLOUPE_TILE_IMAGES/fork0/join-ue5873dadfe/files /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/journal/SPATIAL_RNA_COUNTER_CS.CLOUPE_TILE_IMAGES.fork0.ue5873dadfe 
                               59044  309588     720     9         0   10214         0   20539     cloupetiler /gpfs/home/jw7078/ST-399/ST-399-A1.jpg /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/SPATIAL_RNA_COUNTER_CS/CLOUPE_TILE_IMAGES/fork0/join-ue5873dadfe/tmp/tmpj5Mcji tiles_0_0 --tilesize 512 --page 0 
2023-04-17 16:38:28 [monitor] Stage exceeded its address space quota (using 604.3, allowed 10G)
2023-04-17 16:38:33 [monitor] Process tree:
                                 PID VSZ(mb) RSS(mb) Procs  Read(mb) (calls) Write(mb) (calls) COMMAND
                               59025  308907      16     9         0     904         0      35 /gpfs/share/apps/spaceranger/1.2.1/external/martian/bin/mrjob /gpfs/share/apps/spaceranger/1.2.1/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/spaceranger/1.2.1/mro/rna/stages/cloupe/cloupe_tile_images join /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/SPATIAL_RNA_COUNTER_CS/CLOUPE_TILE_IMAGES/fork0/join-ue5873dadfe /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/SPATIAL_RNA_COUNTER_CS/CLOUPE_TILE_IMAGES/fork0/join-ue5873dadfe/files /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/journal/SPATIAL_RNA_COUNTER_CS.CLOUPE_TILE_IMAGES.fork0.ue5873dadfe 
                               59034     339      30     1         0     853         0      41   python /gpfs/share/apps/spaceranger/1.2.1/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/spaceranger/1.2.1/mro/rna/stages/cloupe/cloupe_tile_images join /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/SPATIAL_RNA_COUNTER_CS/CLOUPE_TILE_IMAGES/fork0/join-ue5873dadfe /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/SPATIAL_RNA_COUNTER_CS/CLOUPE_TILE_IMAGES/fork0/join-ue5873dadfe/files /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/journal/SPATIAL_RNA_COUNTER_CS.CLOUPE_TILE_IMAGES.fork0.ue5873dadfe 
                               59044  309588     720     9         0   10214         0   22185     cloupetiler /gpfs/home/jw7078/ST-399/ST-399-A1.jpg /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/SPATIAL_RNA_COUNTER_CS/CLOUPE_TILE_IMAGES/fork0/join-ue5873dadfe/tmp/tmpj5Mcji tiles_0_0 --tilesize 512 --page 0 
2023-04-17 16:38:33 [monitor] Stage exceeded its address space quota (using 604.3, allowed 10G)
2023-04-17 16:38:38 [monitor] Process tree:
                                 PID VSZ(mb) RSS(mb) Procs  Read(mb) (calls) Write(mb) (calls) COMMAND
                               59025  308907      16     9         0     966         0      37 /gpfs/share/apps/spaceranger/1.2.1/external/martian/bin/mrjob /gpfs/share/apps/spaceranger/1.2.1/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/spaceranger/1.2.1/mro/rna/stages/cloupe/cloupe_tile_images join /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/SPATIAL_RNA_COUNTER_CS/CLOUPE_TILE_IMAGES/fork0/join-ue5873dadfe /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/SPATIAL_RNA_COUNTER_CS/CLOUPE_TILE_IMAGES/fork0/join-ue5873dadfe/files /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/journal/SPATIAL_RNA_COUNTER_CS.CLOUPE_TILE_IMAGES.fork0.ue5873dadfe 
                               59034     339      30     1         0     853         0      41   python /gpfs/share/apps/spaceranger/1.2.1/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/spaceranger/1.2.1/mro/rna/stages/cloupe/cloupe_tile_images join /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/SPATIAL_RNA_COUNTER_CS/CLOUPE_TILE_IMAGES/fork0/join-ue5873dadfe /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/SPATIAL_RNA_COUNTER_CS/CLOUPE_TILE_IMAGES/fork0/join-ue5873dadfe/files /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/journal/SPATIAL_RNA_COUNTER_CS.CLOUPE_TILE_IMAGES.fork0.ue5873dadfe 
                               59044  309588     721     9         0   10214         0   23580     cloupetiler /gpfs/home/jw7078/ST-399/ST-399-A1.jpg /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/SPATIAL_RNA_COUNTER_CS/CLOUPE_TILE_IMAGES/fork0/join-ue5873dadfe/tmp/tmpj5Mcji tiles_0_0 --tilesize 512 --page 0 
2023-04-17 16:38:38 [monitor] Stage exceeded its address space quota (using 604.3, allowed 10G)
2023-04-17 16:38:43 [monitor] Process tree:
                                 PID VSZ(mb) RSS(mb) Procs  Read(mb) (calls) Write(mb) (calls) COMMAND
                               59025  308907      16     9         0    1028         0      39 /gpfs/share/apps/spaceranger/1.2.1/external/martian/bin/mrjob /gpfs/share/apps/spaceranger/1.2.1/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/spaceranger/1.2.1/mro/rna/stages/cloupe/cloupe_tile_images join /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/SPATIAL_RNA_COUNTER_CS/CLOUPE_TILE_IMAGES/fork0/join-ue5873dadfe /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/SPATIAL_RNA_COUNTER_CS/CLOUPE_TILE_IMAGES/fork0/join-ue5873dadfe/files /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/journal/SPATIAL_RNA_COUNTER_CS.CLOUPE_TILE_IMAGES.fork0.ue5873dadfe 
                               59034     339      30     1         0     853         0      41   python /gpfs/share/apps/spaceranger/1.2.1/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/spaceranger/1.2.1/mro/rna/stages/cloupe/cloupe_tile_images join /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/SPATIAL_RNA_COUNTER_CS/CLOUPE_TILE_IMAGES/fork0/join-ue5873dadfe /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/SPATIAL_RNA_COUNTER_CS/CLOUPE_TILE_IMAGES/fork0/join-ue5873dadfe/files /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/journal/SPATIAL_RNA_COUNTER_CS.CLOUPE_TILE_IMAGES.fork0.ue5873dadfe 
                               59044  309589     721     9         0   10214         0   24812     cloupetiler /gpfs/home/jw7078/ST-399/ST-399-A1.jpg /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/SPATIAL_RNA_COUNTER_CS/CLOUPE_TILE_IMAGES/fork0/join-ue5873dadfe/tmp/tmpj5Mcji tiles_0_0 --tilesize 512 --page 0 
2023-04-17 16:38:43 [monitor] Stage exceeded its address space quota (using 604.3, allowed 10G)
2023-04-17 16:38:48 [monitor] Process tree:
                                 PID VSZ(mb) RSS(mb) Procs  Read(mb) (calls) Write(mb) (calls) COMMAND
                               59025  308907      16     9         0    1090         0      41 /gpfs/share/apps/spaceranger/1.2.1/external/martian/bin/mrjob /gpfs/share/apps/spaceranger/1.2.1/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/spaceranger/1.2.1/mro/rna/stages/cloupe/cloupe_tile_images join /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/SPATIAL_RNA_COUNTER_CS/CLOUPE_TILE_IMAGES/fork0/join-ue5873dadfe /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/SPATIAL_RNA_COUNTER_CS/CLOUPE_TILE_IMAGES/fork0/join-ue5873dadfe/files /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/journal/SPATIAL_RNA_COUNTER_CS.CLOUPE_TILE_IMAGES.fork0.ue5873dadfe 
                               59034     339      30     1         0     853         0      41   python /gpfs/share/apps/spaceranger/1.2.1/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/spaceranger/1.2.1/mro/rna/stages/cloupe/cloupe_tile_images join /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/SPATIAL_RNA_COUNTER_CS/CLOUPE_TILE_IMAGES/fork0/join-ue5873dadfe /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/SPATIAL_RNA_COUNTER_CS/CLOUPE_TILE_IMAGES/fork0/join-ue5873dadfe/files /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/journal/SPATIAL_RNA_COUNTER_CS.CLOUPE_TILE_IMAGES.fork0.ue5873dadfe 
                               59044  309589     722     9         0   10214         0   26005     cloupetiler /gpfs/home/jw7078/ST-399/ST-399-A1.jpg /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/SPATIAL_RNA_COUNTER_CS/CLOUPE_TILE_IMAGES/fork0/join-ue5873dadfe/tmp/tmpj5Mcji tiles_0_0 --tilesize 512 --page 0 
2023-04-17 16:38:48 [monitor] Stage exceeded its address space quota (using 604.3, allowed 10G)
2023-04-17 16:38:53 [monitor] Process tree:
                                 PID VSZ(mb) RSS(mb) Procs  Read(mb) (calls) Write(mb) (calls) COMMAND
                               59025  308907      16     9         0    1152         0      43 /gpfs/share/apps/spaceranger/1.2.1/external/martian/bin/mrjob /gpfs/share/apps/spaceranger/1.2.1/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/spaceranger/1.2.1/mro/rna/stages/cloupe/cloupe_tile_images join /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/SPATIAL_RNA_COUNTER_CS/CLOUPE_TILE_IMAGES/fork0/join-ue5873dadfe /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/SPATIAL_RNA_COUNTER_CS/CLOUPE_TILE_IMAGES/fork0/join-ue5873dadfe/files /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/journal/SPATIAL_RNA_COUNTER_CS.CLOUPE_TILE_IMAGES.fork0.ue5873dadfe 
                               59034     339      30     1         0     853         0      41   python /gpfs/share/apps/spaceranger/1.2.1/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/spaceranger/1.2.1/mro/rna/stages/cloupe/cloupe_tile_images join /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/SPATIAL_RNA_COUNTER_CS/CLOUPE_TILE_IMAGES/fork0/join-ue5873dadfe /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/SPATIAL_RNA_COUNTER_CS/CLOUPE_TILE_IMAGES/fork0/join-ue5873dadfe/files /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/journal/SPATIAL_RNA_COUNTER_CS.CLOUPE_TILE_IMAGES.fork0.ue5873dadfe 
                               59044  309589     723     9         0   10214         0   27485     cloupetiler /gpfs/home/jw7078/ST-399/ST-399-A1.jpg /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/SPATIAL_RNA_COUNTER_CS/CLOUPE_TILE_IMAGES/fork0/join-ue5873dadfe/tmp/tmpj5Mcji tiles_0_0 --tilesize 512 --page 0 
2023-04-17 16:38:53 [monitor] Stage exceeded its address space quota (using 604.3, allowed 10G)
2023-04-17 16:38:58 [monitor] Process tree:
                                 PID VSZ(mb) RSS(mb) Procs  Read(mb) (calls) Write(mb) (calls) COMMAND
                               59025  308907      16     9         0    1227         0      45 /gpfs/share/apps/spaceranger/1.2.1/external/martian/bin/mrjob /gpfs/share/apps/spaceranger/1.2.1/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/spaceranger/1.2.1/mro/rna/stages/cloupe/cloupe_tile_images join /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/SPATIAL_RNA_COUNTER_CS/CLOUPE_TILE_IMAGES/fork0/join-ue5873dadfe /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/SPATIAL_RNA_COUNTER_CS/CLOUPE_TILE_IMAGES/fork0/join-ue5873dadfe/files /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/journal/SPATIAL_RNA_COUNTER_CS.CLOUPE_TILE_IMAGES.fork0.ue5873dadfe 
                               59034     339      30     1         0     853         0      41   python /gpfs/share/apps/spaceranger/1.2.1/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/spaceranger/1.2.1/mro/rna/stages/cloupe/cloupe_tile_images join /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/SPATIAL_RNA_COUNTER_CS/CLOUPE_TILE_IMAGES/fork0/join-ue5873dadfe /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/SPATIAL_RNA_COUNTER_CS/CLOUPE_TILE_IMAGES/fork0/join-ue5873dadfe/files /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/journal/SPATIAL_RNA_COUNTER_CS.CLOUPE_TILE_IMAGES.fork0.ue5873dadfe 
                               59044  812274    1987    22         0   10215         0   28485     cloupetiler /gpfs/home/jw7078/ST-399/ST-399-A1.jpg /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/SPATIAL_RNA_COUNTER_CS/CLOUPE_TILE_IMAGES/fork0/join-ue5873dadfe/tmp/tmpj5Mcji tiles_0_0 --tilesize 512 --page 0 
2023-04-17 16:38:58 [monitor] Stage exceeded its address space quota (using 1095.2, allowed 10G)
2023-04-17 16:39:03 [monitor] Process tree:
                                 PID VSZ(mb) RSS(mb) Procs  Read(mb) (calls) Write(mb) (calls) COMMAND
                               59025  308907      16     9         0    1315         0      47 /gpfs/share/apps/spaceranger/1.2.1/external/martian/bin/mrjob /gpfs/share/apps/spaceranger/1.2.1/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/spaceranger/1.2.1/mro/rna/stages/cloupe/cloupe_tile_images join /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/SPATIAL_RNA_COUNTER_CS/CLOUPE_TILE_IMAGES/fork0/join-ue5873dadfe /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/SPATIAL_RNA_COUNTER_CS/CLOUPE_TILE_IMAGES/fork0/join-ue5873dadfe/files /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/journal/SPATIAL_RNA_COUNTER_CS.CLOUPE_TILE_IMAGES.fork0.ue5873dadfe 
                               59034     339      30     1         0     853         0      41   python /gpfs/share/apps/spaceranger/1.2.1/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/spaceranger/1.2.1/mro/rna/stages/cloupe/cloupe_tile_images join /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/SPATIAL_RNA_COUNTER_CS/CLOUPE_TILE_IMAGES/fork0/join-ue5873dadfe /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/SPATIAL_RNA_COUNTER_CS/CLOUPE_TILE_IMAGES/fork0/join-ue5873dadfe/files /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/journal/SPATIAL_RNA_COUNTER_CS.CLOUPE_TILE_IMAGES.fork0.ue5873dadfe 
                               59044  812274    1951    22         0   10215         0   29875     cloupetiler /gpfs/home/jw7078/ST-399/ST-399-A1.jpg /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/SPATIAL_RNA_COUNTER_CS/CLOUPE_TILE_IMAGES/fork0/join-ue5873dadfe/tmp/tmpj5Mcji tiles_0_0 --tilesize 512 --page 0 
2023-04-17 16:39:03 [monitor] Stage exceeded its address space quota (using 1095.2, allowed 10G)
2023-04-17 16:39:08 [monitor] Process tree:
                                 PID VSZ(mb) RSS(mb) Procs  Read(mb) (calls) Write(mb) (calls) COMMAND
                               59025  424415      19    12         0    1403         0      49 /gpfs/share/apps/spaceranger/1.2.1/external/martian/bin/mrjob /gpfs/share/apps/spaceranger/1.2.1/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/spaceranger/1.2.1/mro/rna/stages/cloupe/cloupe_tile_images join /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/SPATIAL_RNA_COUNTER_CS/CLOUPE_TILE_IMAGES/fork0/join-ue5873dadfe /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/SPATIAL_RNA_COUNTER_CS/CLOUPE_TILE_IMAGES/fork0/join-ue5873dadfe/files /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/journal/SPATIAL_RNA_COUNTER_CS.CLOUPE_TILE_IMAGES.fork0.ue5873dadfe 
                               59034     339      30     1         0     853         0      41   python /gpfs/share/apps/spaceranger/1.2.1/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/spaceranger/1.2.1/mro/rna/stages/cloupe/cloupe_tile_images join /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/SPATIAL_RNA_COUNTER_CS/CLOUPE_TILE_IMAGES/fork0/join-ue5873dadfe /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/SPATIAL_RNA_COUNTER_CS/CLOUPE_TILE_IMAGES/fork0/join-ue5873dadfe/files /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/journal/SPATIAL_RNA_COUNTER_CS.CLOUPE_TILE_IMAGES.fork0.ue5873dadfe 
                               59044  812274    1916    22         0   10215         0   32645     cloupetiler /gpfs/home/jw7078/ST-399/ST-399-A1.jpg /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/SPATIAL_RNA_COUNTER_CS/CLOUPE_TILE_IMAGES/fork0/join-ue5873dadfe/tmp/tmpj5Mcji tiles_0_0 --tilesize 512 --page 0 
2023-04-17 16:39:08 [monitor] Stage exceeded its address space quota (using 1208.0, allowed 10G)
2023-04-17 16:39:13 [monitor] Process tree:
                                 PID VSZ(mb) RSS(mb) Procs  Read(mb) (calls) Write(mb) (calls) COMMAND
                               59025  424415      18    12         0    1498         0      55 /gpfs/share/apps/spaceranger/1.2.1/external/martian/bin/mrjob /gpfs/share/apps/spaceranger/1.2.1/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/spaceranger/1.2.1/mro/rna/stages/cloupe/cloupe_tile_images join /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/SPATIAL_RNA_COUNTER_CS/CLOUPE_TILE_IMAGES/fork0/join-ue5873dadfe /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/SPATIAL_RNA_COUNTER_CS/CLOUPE_TILE_IMAGES/fork0/join-ue5873dadfe/files /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/journal/SPATIAL_RNA_COUNTER_CS.CLOUPE_TILE_IMAGES.fork0.ue5873dadfe 
                               59034     339      30     1         0     853         0      41   python /gpfs/share/apps/spaceranger/1.2.1/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/spaceranger/1.2.1/mro/rna/stages/cloupe/cloupe_tile_images join /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/SPATIAL_RNA_COUNTER_CS/CLOUPE_TILE_IMAGES/fork0/join-ue5873dadfe /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/SPATIAL_RNA_COUNTER_CS/CLOUPE_TILE_IMAGES/fork0/join-ue5873dadfe/files /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/journal/SPATIAL_RNA_COUNTER_CS.CLOUPE_TILE_IMAGES.fork0.ue5873dadfe 
                               59044  812274    1880    22         0   10216         0   35037     cloupetiler /gpfs/home/jw7078/ST-399/ST-399-A1.jpg /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/SPATIAL_RNA_COUNTER_CS/CLOUPE_TILE_IMAGES/fork0/join-ue5873dadfe/tmp/tmpj5Mcji tiles_0_0 --tilesize 512 --page 0 
2023-04-17 16:39:13 [monitor] Stage exceeded its address space quota (using 1208.0, allowed 10G)
2023-04-17 16:39:18 [monitor] Process tree:
                                 PID VSZ(mb) RSS(mb) Procs  Read(mb) (calls) Write(mb) (calls) COMMAND
                               59025  424415      18    12         0    1590         0      58 /gpfs/share/apps/spaceranger/1.2.1/external/martian/bin/mrjob /gpfs/share/apps/spaceranger/1.2.1/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/spaceranger/1.2.1/mro/rna/stages/cloupe/cloupe_tile_images join /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/SPATIAL_RNA_COUNTER_CS/CLOUPE_TILE_IMAGES/fork0/join-ue5873dadfe /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/SPATIAL_RNA_COUNTER_CS/CLOUPE_TILE_IMAGES/fork0/join-ue5873dadfe/files /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/journal/SPATIAL_RNA_COUNTER_CS.CLOUPE_TILE_IMAGES.fork0.ue5873dadfe 
                               59034     339      30     1         0     853         0      41   python /gpfs/share/apps/spaceranger/1.2.1/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/spaceranger/1.2.1/mro/rna/stages/cloupe/cloupe_tile_images join /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/SPATIAL_RNA_COUNTER_CS/CLOUPE_TILE_IMAGES/fork0/join-ue5873dadfe /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/SPATIAL_RNA_COUNTER_CS/CLOUPE_TILE_IMAGES/fork0/join-ue5873dadfe/files /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/journal/SPATIAL_RNA_COUNTER_CS.CLOUPE_TILE_IMAGES.fork0.ue5873dadfe 
                               59044  812274    1844    22         0   10216         0   36642     cloupetiler /gpfs/home/jw7078/ST-399/ST-399-A1.jpg /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/SPATIAL_RNA_COUNTER_CS/CLOUPE_TILE_IMAGES/fork0/join-ue5873dadfe/tmp/tmpj5Mcji tiles_0_0 --tilesize 512 --page 0 
2023-04-17 16:39:18 [monitor] Stage exceeded its address space quota (using 1208.0, allowed 10G)
2023-04-17 16:39:23 [monitor] Process tree:
                                 PID VSZ(mb) RSS(mb) Procs  Read(mb) (calls) Write(mb) (calls) COMMAND
                               59025  424415      18    12         0    1681         0      61 /gpfs/share/apps/spaceranger/1.2.1/external/martian/bin/mrjob /gpfs/share/apps/spaceranger/1.2.1/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/spaceranger/1.2.1/mro/rna/stages/cloupe/cloupe_tile_images join /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/SPATIAL_RNA_COUNTER_CS/CLOUPE_TILE_IMAGES/fork0/join-ue5873dadfe /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/SPATIAL_RNA_COUNTER_CS/CLOUPE_TILE_IMAGES/fork0/join-ue5873dadfe/files /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/journal/SPATIAL_RNA_COUNTER_CS.CLOUPE_TILE_IMAGES.fork0.ue5873dadfe 
                               59034     339      30     1         0     853         0      41   python /gpfs/share/apps/spaceranger/1.2.1/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/spaceranger/1.2.1/mro/rna/stages/cloupe/cloupe_tile_images join /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/SPATIAL_RNA_COUNTER_CS/CLOUPE_TILE_IMAGES/fork0/join-ue5873dadfe /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/SPATIAL_RNA_COUNTER_CS/CLOUPE_TILE_IMAGES/fork0/join-ue5873dadfe/files /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/journal/SPATIAL_RNA_COUNTER_CS.CLOUPE_TILE_IMAGES.fork0.ue5873dadfe 
                               59044  812274    1922    22         0   10217         0   37775     cloupetiler /gpfs/home/jw7078/ST-399/ST-399-A1.jpg /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/SPATIAL_RNA_COUNTER_CS/CLOUPE_TILE_IMAGES/fork0/join-ue5873dadfe/tmp/tmpj5Mcji tiles_0_0 --tilesize 512 --page 0 
2023-04-17 16:39:23 [monitor] Stage exceeded its address space quota (using 1208.0, allowed 10G)
2023-04-17 16:39:28 [monitor] Process tree:
                                 PID VSZ(mb) RSS(mb) Procs  Read(mb) (calls) Write(mb) (calls) COMMAND
                               59025  424415      18    12         0    1772         0      63 /gpfs/share/apps/spaceranger/1.2.1/external/martian/bin/mrjob /gpfs/share/apps/spaceranger/1.2.1/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/spaceranger/1.2.1/mro/rna/stages/cloupe/cloupe_tile_images join /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/SPATIAL_RNA_COUNTER_CS/CLOUPE_TILE_IMAGES/fork0/join-ue5873dadfe /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/SPATIAL_RNA_COUNTER_CS/CLOUPE_TILE_IMAGES/fork0/join-ue5873dadfe/files /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/journal/SPATIAL_RNA_COUNTER_CS.CLOUPE_TILE_IMAGES.fork0.ue5873dadfe 
                               59034     339      30     1         0     853         0      41   python /gpfs/share/apps/spaceranger/1.2.1/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/spaceranger/1.2.1/mro/rna/stages/cloupe/cloupe_tile_images join /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/SPATIAL_RNA_COUNTER_CS/CLOUPE_TILE_IMAGES/fork0/join-ue5873dadfe /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/SPATIAL_RNA_COUNTER_CS/CLOUPE_TILE_IMAGES/fork0/join-ue5873dadfe/files /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/journal/SPATIAL_RNA_COUNTER_CS.CLOUPE_TILE_IMAGES.fork0.ue5873dadfe 
                               59044  812274    1887    22         0   10217         0   39768     cloupetiler /gpfs/home/jw7078/ST-399/ST-399-A1.jpg /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/SPATIAL_RNA_COUNTER_CS/CLOUPE_TILE_IMAGES/fork0/join-ue5873dadfe/tmp/tmpj5Mcji tiles_0_0 --tilesize 512 --page 0 
2023-04-17 16:39:28 [monitor] Stage exceeded its address space quota (using 1208.0, allowed 10G)
2023-04-17 16:39:33 [monitor] Process tree:
                                 PID VSZ(mb) RSS(mb) Procs  Read(mb) (calls) Write(mb) (calls) COMMAND
                               59025  424415      18    12         0    1863         0      65 /gpfs/share/apps/spaceranger/1.2.1/external/martian/bin/mrjob /gpfs/share/apps/spaceranger/1.2.1/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/spaceranger/1.2.1/mro/rna/stages/cloupe/cloupe_tile_images join /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/SPATIAL_RNA_COUNTER_CS/CLOUPE_TILE_IMAGES/fork0/join-ue5873dadfe /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/SPATIAL_RNA_COUNTER_CS/CLOUPE_TILE_IMAGES/fork0/join-ue5873dadfe/files /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/journal/SPATIAL_RNA_COUNTER_CS.CLOUPE_TILE_IMAGES.fork0.ue5873dadfe 
                               59034     339      30     1         0     853         0      41   python /gpfs/share/apps/spaceranger/1.2.1/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/spaceranger/1.2.1/mro/rna/stages/cloupe/cloupe_tile_images join /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/SPATIAL_RNA_COUNTER_CS/CLOUPE_TILE_IMAGES/fork0/join-ue5873dadfe /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/SPATIAL_RNA_COUNTER_CS/CLOUPE_TILE_IMAGES/fork0/join-ue5873dadfe/files /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/journal/SPATIAL_RNA_COUNTER_CS.CLOUPE_TILE_IMAGES.fork0.ue5873dadfe 
                               59044  812274    1860    22         0   10217         0   40882     cloupetiler /gpfs/home/jw7078/ST-399/ST-399-A1.jpg /gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/SPATIAL_RNA_COUNTER_CS/CLOUPE_TILE_IMAGES/fork0/join-ue5873dadfe/tmp/tmpj5Mcji tiles_0_0 --tilesize 512 --page 0 
2023-04-17 16:39:33 [monitor] Stage exceeded its address space quota (using 1208.0, allowed 10G)
2023-04-17 16:39:37 [info] cloupetiler output: 
2023-04-17 16:39:37 [time] __end__
