@include "rna/_sc_rna_analyzer_stages.mro"

call COMBINE_CLUSTERING(
    skip           = false,
    kmeans_h5      = "/gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_RNA_COUNTER/SPATIAL_RNA_ANALYZER/RUN_KMEANS/fork0/join-ue5873db279/files/kmeans_h5.h5",
    kmeans_csv     = "/gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_RNA_COUNTER/SPATIAL_RNA_ANALYZER/RUN_KMEANS/fork0/join-ue5873db279/files/kmeans_csv",
    graphclust_h5  = "/gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_RNA_COUNTER/SPATIAL_RNA_ANALYZER/MERGE_CLUSTERS/fork0/join-ue5873db282/files/clusters_h5.h5",
    graphclust_csv = "/gpfs/data/yanailab/projects/jw7078/processed_data/399-A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_RNA_COUNTER/SPATIAL_RNA_ANALYZER/MERGE_CLUSTERS/fork0/join-ue5873db282/files/clusters_csv",
)
