2023-05-19 18:15:31 [time] __start__
2023-05-19 18:15:31 [monitor] cgroup memory limit of 107374182400 bytes detected
2023-05-19 18:15:36 [monitor] Process tree:
                                 PID VSZ(mb) RSS(mb) Procs  Read(mb) (calls) Write(mb) (calls) COMMAND
                              196696  231836      10     7         0      39         0       6 /gpfs/share/apps/spaceranger/1.2.1/external/martian/bin/mrjob /gpfs/share/apps/spaceranger/1.2.1/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/spaceranger/1.2.1/mro/rna/stages/common/parse_target_features main /gpfs/data/yanailab/public/linda_share/maayan_STalign/ST358_A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_RNA_COUNTER/PARSE_TARGET_FEATURES/fork0/chnk0-ufe8a67f502 /gpfs/data/yanailab/public/linda_share/maayan_STalign/ST358_A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_RNA_COUNTER/PARSE_TARGET_FEATURES/fork0/chnk0-ufe8a67f502/files /gpfs/data/yanailab/public/linda_share/maayan_STalign/ST358_A1/journal/SPATIAL_RNA_COUNTER_CS.SPATIAL_RNA_COUNTER.PARSE_TARGET_FEATURES.fork0.chnk0.ufe8a67f502 
                              196702     523      99     1         0    3847         0     152   python /gpfs/share/apps/spaceranger/1.2.1/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/spaceranger/1.2.1/mro/rna/stages/common/parse_target_features main /gpfs/data/yanailab/public/linda_share/maayan_STalign/ST358_A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_RNA_COUNTER/PARSE_TARGET_FEATURES/fork0/chnk0-ufe8a67f502 /gpfs/data/yanailab/public/linda_share/maayan_STalign/ST358_A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_RNA_COUNTER/PARSE_TARGET_FEATURES/fork0/chnk0-ufe8a67f502/files /gpfs/data/yanailab/public/linda_share/maayan_STalign/ST358_A1/journal/SPATIAL_RNA_COUNTER_CS.SPATIAL_RNA_COUNTER.PARSE_TARGET_FEATURES.fork0.chnk0.ufe8a67f502 
2023-05-19 18:15:36 [monitor] Stage exceeded its address space quota (using 226.9, allowed 7G)
2023-05-19 18:15:38 [time] __end__
