2023-05-19 19:16:44 [time] __start__
2023-05-19 19:16:44 [monitor] cgroup memory limit of 107374182400 bytes detected
2023-05-19 19:16:49 [monitor] Process tree:
                                 PID VSZ(mb) RSS(mb) Procs  Read(mb) (calls) Write(mb) (calls) COMMAND
                              228984  231836      10     7         0      45         0       6 /gpfs/share/apps/spaceranger/1.2.1/external/martian/bin/mrjob /gpfs/share/apps/spaceranger/1.2.1/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/spaceranger/1.2.1/mro/rna/stages/analyzer/run_differential_expression join /gpfs/data/yanailab/public/linda_share/maayan_STalign/ST358_A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_RNA_COUNTER/SPATIAL_RNA_ANALYZER/RUN_DIFFERENTIAL_EXPRESSION/fork0/join-ufe8a68027a /gpfs/data/yanailab/public/linda_share/maayan_STalign/ST358_A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_RNA_COUNTER/SPATIAL_RNA_ANALYZER/RUN_DIFFERENTIAL_EXPRESSION/fork0/join-ufe8a68027a/files /gpfs/data/yanailab/public/linda_share/maayan_STalign/ST358_A1/journal/SPATIAL_RNA_COUNTER_CS.SPATIAL_RNA_COUNTER.SPATIAL_RNA_ANALYZER.RUN_DIFFERENTIAL_EXPRESSION.fork0.ufe8a68027a 
                              228990     584     160     1         0    4876         0     516   python /gpfs/share/apps/spaceranger/1.2.1/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/spaceranger/1.2.1/mro/rna/stages/analyzer/run_differential_expression join /gpfs/data/yanailab/public/linda_share/maayan_STalign/ST358_A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_RNA_COUNTER/SPATIAL_RNA_ANALYZER/RUN_DIFFERENTIAL_EXPRESSION/fork0/join-ufe8a68027a /gpfs/data/yanailab/public/linda_share/maayan_STalign/ST358_A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_RNA_COUNTER/SPATIAL_RNA_ANALYZER/RUN_DIFFERENTIAL_EXPRESSION/fork0/join-ufe8a68027a/files /gpfs/data/yanailab/public/linda_share/maayan_STalign/ST358_A1/journal/SPATIAL_RNA_COUNTER_CS.SPATIAL_RNA_COUNTER.SPATIAL_RNA_ANALYZER.RUN_DIFFERENTIAL_EXPRESSION.fork0.ufe8a68027a 
                              229670     126       3     1         0      14         0       0     cp /gpfs/data/yanailab/public/linda_share/maayan_STalign/ST358_A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_RNA_COUNTER/SPATIAL_RNA_ANALYZER/RUN_DIFFERENTIAL_EXPRESSION/fork0/chnk06-ufe8a68027c/files/diffexp_csv/kmeans_6_clusters/differential_expression.csv /gpfs/data/yanailab/public/linda_share/maayan_STalign/ST358_A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_RNA_COUNTER/SPATIAL_RNA_ANALYZER/RUN_DIFFERENTIAL_EXPRESSION/fork0/join-ufe8a68027a/files/diffexp_csv/kmeans_6_clusters/differential_expression.csv 
2023-05-19 19:16:49 [monitor] Stage exceeded its address space quota (using 227.1, allowed 4G)
2023-05-19 19:16:49 [time] __end__
