2023-05-19 19:12:28 [time] __start__
2023-05-19 19:12:28 [monitor] cgroup memory limit of 107374182400 bytes detected
2023-05-19 19:12:33 [monitor] Process tree:
                                 PID VSZ(mb) RSS(mb) Procs  Read(mb) (calls) Write(mb) (calls) COMMAND
                              221095  231836      10     7         0      45         0       6 /gpfs/share/apps/spaceranger/1.2.1/external/martian/bin/mrjob /gpfs/share/apps/spaceranger/1.2.1/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/spaceranger/1.2.1/mro/rna/stages/analyzer/run_graph_clustering join /gpfs/data/yanailab/public/linda_share/maayan_STalign/ST358_A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_RNA_COUNTER/SPATIAL_RNA_ANALYZER/RUN_GRAPH_CLUSTERING/fork0/join-ufe8a680254 /gpfs/data/yanailab/public/linda_share/maayan_STalign/ST358_A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_RNA_COUNTER/SPATIAL_RNA_ANALYZER/RUN_GRAPH_CLUSTERING/fork0/join-ufe8a680254/files /gpfs/data/yanailab/public/linda_share/maayan_STalign/ST358_A1/journal/SPATIAL_RNA_COUNTER_CS.SPATIAL_RNA_COUNTER.SPATIAL_RNA_ANALYZER.RUN_GRAPH_CLUSTERING.fork0.ufe8a680254 
                              221101     552     127     1         0    4005         0  135329   python /gpfs/share/apps/spaceranger/1.2.1/external/martian/adapters/python/martian_shell.py /gpfs/share/apps/spaceranger/1.2.1/mro/rna/stages/analyzer/run_graph_clustering join /gpfs/data/yanailab/public/linda_share/maayan_STalign/ST358_A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_RNA_COUNTER/SPATIAL_RNA_ANALYZER/RUN_GRAPH_CLUSTERING/fork0/join-ufe8a680254 /gpfs/data/yanailab/public/linda_share/maayan_STalign/ST358_A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_RNA_COUNTER/SPATIAL_RNA_ANALYZER/RUN_GRAPH_CLUSTERING/fork0/join-ufe8a680254/files /gpfs/data/yanailab/public/linda_share/maayan_STalign/ST358_A1/journal/SPATIAL_RNA_COUNTER_CS.SPATIAL_RNA_COUNTER.SPATIAL_RNA_ANALYZER.RUN_GRAPH_CLUSTERING.fork0.ufe8a680254 
                              221134      21      12     1         0  131755         0       0     convert -i - -o /gpfs/data/yanailab/public/linda_share/maayan_STalign/ST358_A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_RNA_COUNTER/SPATIAL_RNA_ANALYZER/RUN_GRAPH_CLUSTERING/fork0/join-ufe8a680254/files/matrix.bin 
2023-05-19 19:12:33 [monitor] Stage exceeded its address space quota (using 227.0, allowed 6G)
2023-05-19 19:12:35 [time] __end__
