2023-05-19 19:10:21 [time] __start__
2023-05-19 19:10:21 [monitor] cgroup memory limit of 107374182400 bytes detected
2023-05-19 19:10:26 [monitor] Process tree:
                                 PID VSZ(mb) RSS(mb) Procs  Read(mb) (calls) Write(mb) (calls) COMMAND
                              220371  231773      10     7         0      44         0       7 /gpfs/share/apps/spaceranger/1.2.1/external/martian/bin/mrjob /gpfs/share/apps/spaceranger/1.2.1/lib/bin/cr_lib martian write_pos_bam main /gpfs/data/yanailab/public/linda_share/maayan_STalign/ST358_A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_RNA_COUNTER/_BASIC_SPATIAL_RNA_COUNTER/WRITE_POS_BAM/fork0/chnk10-ufe8a680091 /gpfs/data/yanailab/public/linda_share/maayan_STalign/ST358_A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_RNA_COUNTER/_BASIC_SPATIAL_RNA_COUNTER/WRITE_POS_BAM/fork0/chnk10-ufe8a680091/files /gpfs/data/yanailab/public/linda_share/maayan_STalign/ST358_A1/journal/SPATIAL_RNA_COUNTER_CS.SPATIAL_RNA_COUNTER._BASIC_SPATIAL_RNA_COUNTER.WRITE_POS_BAM.fork0.chnk10.ufe8a680091 
                              220378  154152      84     5         0  201950         0       3   /gpfs/share/apps/spaceranger/1.2.1/lib/bin/cr_lib martian write_pos_bam main /gpfs/data/yanailab/public/linda_share/maayan_STalign/ST358_A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_RNA_COUNTER/_BASIC_SPATIAL_RNA_COUNTER/WRITE_POS_BAM/fork0/chnk10-ufe8a680091 /gpfs/data/yanailab/public/linda_share/maayan_STalign/ST358_A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_RNA_COUNTER/_BASIC_SPATIAL_RNA_COUNTER/WRITE_POS_BAM/fork0/chnk10-ufe8a680091/files /gpfs/data/yanailab/public/linda_share/maayan_STalign/ST358_A1/journal/SPATIAL_RNA_COUNTER_CS.SPATIAL_RNA_COUNTER._BASIC_SPATIAL_RNA_COUNTER.WRITE_POS_BAM.fork0.chnk10.ufe8a680091 
2023-05-19 19:10:26 [monitor] Stage exceeded its address space quota (using 376.9, allowed 5G)
2023-05-19 19:10:31 [monitor] Process tree:
                                 PID VSZ(mb) RSS(mb) Procs  Read(mb) (calls) Write(mb) (calls) COMMAND
                              220371  231773      10     7         0      82         0       9 /gpfs/share/apps/spaceranger/1.2.1/external/martian/bin/mrjob /gpfs/share/apps/spaceranger/1.2.1/lib/bin/cr_lib martian write_pos_bam main /gpfs/data/yanailab/public/linda_share/maayan_STalign/ST358_A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_RNA_COUNTER/_BASIC_SPATIAL_RNA_COUNTER/WRITE_POS_BAM/fork0/chnk10-ufe8a680091 /gpfs/data/yanailab/public/linda_share/maayan_STalign/ST358_A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_RNA_COUNTER/_BASIC_SPATIAL_RNA_COUNTER/WRITE_POS_BAM/fork0/chnk10-ufe8a680091/files /gpfs/data/yanailab/public/linda_share/maayan_STalign/ST358_A1/journal/SPATIAL_RNA_COUNTER_CS.SPATIAL_RNA_COUNTER._BASIC_SPATIAL_RNA_COUNTER.WRITE_POS_BAM.fork0.chnk10.ufe8a680091 
                              220378  154389     128     5         0  210115         0       7   /gpfs/share/apps/spaceranger/1.2.1/lib/bin/cr_lib martian write_pos_bam main /gpfs/data/yanailab/public/linda_share/maayan_STalign/ST358_A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_RNA_COUNTER/_BASIC_SPATIAL_RNA_COUNTER/WRITE_POS_BAM/fork0/chnk10-ufe8a680091 /gpfs/data/yanailab/public/linda_share/maayan_STalign/ST358_A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_RNA_COUNTER/_BASIC_SPATIAL_RNA_COUNTER/WRITE_POS_BAM/fork0/chnk10-ufe8a680091/files /gpfs/data/yanailab/public/linda_share/maayan_STalign/ST358_A1/journal/SPATIAL_RNA_COUNTER_CS.SPATIAL_RNA_COUNTER._BASIC_SPATIAL_RNA_COUNTER.WRITE_POS_BAM.fork0.chnk10.ufe8a680091 
2023-05-19 19:10:31 [monitor] Stage exceeded its address space quota (using 377.1, allowed 5G)
2023-05-19 19:10:36 [monitor] Process tree:
                                 PID VSZ(mb) RSS(mb) Procs  Read(mb) (calls) Write(mb) (calls) COMMAND
                              220371  231773      10     7         0     121         0      12 /gpfs/share/apps/spaceranger/1.2.1/external/martian/bin/mrjob /gpfs/share/apps/spaceranger/1.2.1/lib/bin/cr_lib martian write_pos_bam main /gpfs/data/yanailab/public/linda_share/maayan_STalign/ST358_A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_RNA_COUNTER/_BASIC_SPATIAL_RNA_COUNTER/WRITE_POS_BAM/fork0/chnk10-ufe8a680091 /gpfs/data/yanailab/public/linda_share/maayan_STalign/ST358_A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_RNA_COUNTER/_BASIC_SPATIAL_RNA_COUNTER/WRITE_POS_BAM/fork0/chnk10-ufe8a680091/files /gpfs/data/yanailab/public/linda_share/maayan_STalign/ST358_A1/journal/SPATIAL_RNA_COUNTER_CS.SPATIAL_RNA_COUNTER._BASIC_SPATIAL_RNA_COUNTER.WRITE_POS_BAM.fork0.chnk10.ufe8a680091 
                              220378  154388     134     5         0  214510         0      14   /gpfs/share/apps/spaceranger/1.2.1/lib/bin/cr_lib martian write_pos_bam main /gpfs/data/yanailab/public/linda_share/maayan_STalign/ST358_A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_RNA_COUNTER/_BASIC_SPATIAL_RNA_COUNTER/WRITE_POS_BAM/fork0/chnk10-ufe8a680091 /gpfs/data/yanailab/public/linda_share/maayan_STalign/ST358_A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_RNA_COUNTER/_BASIC_SPATIAL_RNA_COUNTER/WRITE_POS_BAM/fork0/chnk10-ufe8a680091/files /gpfs/data/yanailab/public/linda_share/maayan_STalign/ST358_A1/journal/SPATIAL_RNA_COUNTER_CS.SPATIAL_RNA_COUNTER._BASIC_SPATIAL_RNA_COUNTER.WRITE_POS_BAM.fork0.chnk10.ufe8a680091 
2023-05-19 19:10:36 [monitor] Stage exceeded its address space quota (using 377.1, allowed 5G)
2023-05-19 19:10:41 [monitor] Process tree:
                                 PID VSZ(mb) RSS(mb) Procs  Read(mb) (calls) Write(mb) (calls) COMMAND
                              220371  231773      10     7         0     160         0      15 /gpfs/share/apps/spaceranger/1.2.1/external/martian/bin/mrjob /gpfs/share/apps/spaceranger/1.2.1/lib/bin/cr_lib martian write_pos_bam main /gpfs/data/yanailab/public/linda_share/maayan_STalign/ST358_A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_RNA_COUNTER/_BASIC_SPATIAL_RNA_COUNTER/WRITE_POS_BAM/fork0/chnk10-ufe8a680091 /gpfs/data/yanailab/public/linda_share/maayan_STalign/ST358_A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_RNA_COUNTER/_BASIC_SPATIAL_RNA_COUNTER/WRITE_POS_BAM/fork0/chnk10-ufe8a680091/files /gpfs/data/yanailab/public/linda_share/maayan_STalign/ST358_A1/journal/SPATIAL_RNA_COUNTER_CS.SPATIAL_RNA_COUNTER._BASIC_SPATIAL_RNA_COUNTER.WRITE_POS_BAM.fork0.chnk10.ufe8a680091 
                              220378  154388     136     5         0  218647         0      22   /gpfs/share/apps/spaceranger/1.2.1/lib/bin/cr_lib martian write_pos_bam main /gpfs/data/yanailab/public/linda_share/maayan_STalign/ST358_A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_RNA_COUNTER/_BASIC_SPATIAL_RNA_COUNTER/WRITE_POS_BAM/fork0/chnk10-ufe8a680091 /gpfs/data/yanailab/public/linda_share/maayan_STalign/ST358_A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_RNA_COUNTER/_BASIC_SPATIAL_RNA_COUNTER/WRITE_POS_BAM/fork0/chnk10-ufe8a680091/files /gpfs/data/yanailab/public/linda_share/maayan_STalign/ST358_A1/journal/SPATIAL_RNA_COUNTER_CS.SPATIAL_RNA_COUNTER._BASIC_SPATIAL_RNA_COUNTER.WRITE_POS_BAM.fork0.chnk10.ufe8a680091 
2023-05-19 19:10:41 [monitor] Stage exceeded its address space quota (using 377.1, allowed 5G)
2023-05-19 19:10:46 [monitor] Process tree:
                                 PID VSZ(mb) RSS(mb) Procs  Read(mb) (calls) Write(mb) (calls) COMMAND
                              220371  231773      10     7         0     199         0      18 /gpfs/share/apps/spaceranger/1.2.1/external/martian/bin/mrjob /gpfs/share/apps/spaceranger/1.2.1/lib/bin/cr_lib martian write_pos_bam main /gpfs/data/yanailab/public/linda_share/maayan_STalign/ST358_A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_RNA_COUNTER/_BASIC_SPATIAL_RNA_COUNTER/WRITE_POS_BAM/fork0/chnk10-ufe8a680091 /gpfs/data/yanailab/public/linda_share/maayan_STalign/ST358_A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_RNA_COUNTER/_BASIC_SPATIAL_RNA_COUNTER/WRITE_POS_BAM/fork0/chnk10-ufe8a680091/files /gpfs/data/yanailab/public/linda_share/maayan_STalign/ST358_A1/journal/SPATIAL_RNA_COUNTER_CS.SPATIAL_RNA_COUNTER._BASIC_SPATIAL_RNA_COUNTER.WRITE_POS_BAM.fork0.chnk10.ufe8a680091 
                              220378  154388     136     5         0  222697         0      29   /gpfs/share/apps/spaceranger/1.2.1/lib/bin/cr_lib martian write_pos_bam main /gpfs/data/yanailab/public/linda_share/maayan_STalign/ST358_A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_RNA_COUNTER/_BASIC_SPATIAL_RNA_COUNTER/WRITE_POS_BAM/fork0/chnk10-ufe8a680091 /gpfs/data/yanailab/public/linda_share/maayan_STalign/ST358_A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_RNA_COUNTER/_BASIC_SPATIAL_RNA_COUNTER/WRITE_POS_BAM/fork0/chnk10-ufe8a680091/files /gpfs/data/yanailab/public/linda_share/maayan_STalign/ST358_A1/journal/SPATIAL_RNA_COUNTER_CS.SPATIAL_RNA_COUNTER._BASIC_SPATIAL_RNA_COUNTER.WRITE_POS_BAM.fork0.chnk10.ufe8a680091 
2023-05-19 19:10:46 [monitor] Stage exceeded its address space quota (using 377.1, allowed 5G)
2023-05-19 19:10:51 [monitor] Process tree:
                                 PID VSZ(mb) RSS(mb) Procs  Read(mb) (calls) Write(mb) (calls) COMMAND
                              220371  231773      10     7         0     237         0      20 /gpfs/share/apps/spaceranger/1.2.1/external/martian/bin/mrjob /gpfs/share/apps/spaceranger/1.2.1/lib/bin/cr_lib martian write_pos_bam main /gpfs/data/yanailab/public/linda_share/maayan_STalign/ST358_A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_RNA_COUNTER/_BASIC_SPATIAL_RNA_COUNTER/WRITE_POS_BAM/fork0/chnk10-ufe8a680091 /gpfs/data/yanailab/public/linda_share/maayan_STalign/ST358_A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_RNA_COUNTER/_BASIC_SPATIAL_RNA_COUNTER/WRITE_POS_BAM/fork0/chnk10-ufe8a680091/files /gpfs/data/yanailab/public/linda_share/maayan_STalign/ST358_A1/journal/SPATIAL_RNA_COUNTER_CS.SPATIAL_RNA_COUNTER._BASIC_SPATIAL_RNA_COUNTER.WRITE_POS_BAM.fork0.chnk10.ufe8a680091 
                              220378  154388     136     5         0  226799         0      37   /gpfs/share/apps/spaceranger/1.2.1/lib/bin/cr_lib martian write_pos_bam main /gpfs/data/yanailab/public/linda_share/maayan_STalign/ST358_A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_RNA_COUNTER/_BASIC_SPATIAL_RNA_COUNTER/WRITE_POS_BAM/fork0/chnk10-ufe8a680091 /gpfs/data/yanailab/public/linda_share/maayan_STalign/ST358_A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_RNA_COUNTER/_BASIC_SPATIAL_RNA_COUNTER/WRITE_POS_BAM/fork0/chnk10-ufe8a680091/files /gpfs/data/yanailab/public/linda_share/maayan_STalign/ST358_A1/journal/SPATIAL_RNA_COUNTER_CS.SPATIAL_RNA_COUNTER._BASIC_SPATIAL_RNA_COUNTER.WRITE_POS_BAM.fork0.chnk10.ufe8a680091 
2023-05-19 19:10:51 [monitor] Stage exceeded its address space quota (using 377.1, allowed 5G)
2023-05-19 19:10:56 [monitor] Process tree:
                                 PID VSZ(mb) RSS(mb) Procs  Read(mb) (calls) Write(mb) (calls) COMMAND
                              220371  231774      10     7         0     276         0      23 /gpfs/share/apps/spaceranger/1.2.1/external/martian/bin/mrjob /gpfs/share/apps/spaceranger/1.2.1/lib/bin/cr_lib martian write_pos_bam main /gpfs/data/yanailab/public/linda_share/maayan_STalign/ST358_A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_RNA_COUNTER/_BASIC_SPATIAL_RNA_COUNTER/WRITE_POS_BAM/fork0/chnk10-ufe8a680091 /gpfs/data/yanailab/public/linda_share/maayan_STalign/ST358_A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_RNA_COUNTER/_BASIC_SPATIAL_RNA_COUNTER/WRITE_POS_BAM/fork0/chnk10-ufe8a680091/files /gpfs/data/yanailab/public/linda_share/maayan_STalign/ST358_A1/journal/SPATIAL_RNA_COUNTER_CS.SPATIAL_RNA_COUNTER._BASIC_SPATIAL_RNA_COUNTER.WRITE_POS_BAM.fork0.chnk10.ufe8a680091 
                              220378  154388     136     5         0  231123         0      44   /gpfs/share/apps/spaceranger/1.2.1/lib/bin/cr_lib martian write_pos_bam main /gpfs/data/yanailab/public/linda_share/maayan_STalign/ST358_A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_RNA_COUNTER/_BASIC_SPATIAL_RNA_COUNTER/WRITE_POS_BAM/fork0/chnk10-ufe8a680091 /gpfs/data/yanailab/public/linda_share/maayan_STalign/ST358_A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_RNA_COUNTER/_BASIC_SPATIAL_RNA_COUNTER/WRITE_POS_BAM/fork0/chnk10-ufe8a680091/files /gpfs/data/yanailab/public/linda_share/maayan_STalign/ST358_A1/journal/SPATIAL_RNA_COUNTER_CS.SPATIAL_RNA_COUNTER._BASIC_SPATIAL_RNA_COUNTER.WRITE_POS_BAM.fork0.chnk10.ufe8a680091 
2023-05-19 19:10:56 [monitor] Stage exceeded its address space quota (using 377.1, allowed 5G)
2023-05-19 19:11:01 [monitor] Process tree:
                                 PID VSZ(mb) RSS(mb) Procs  Read(mb) (calls) Write(mb) (calls) COMMAND
                              220371  231774      10     7         0     314         0      25 /gpfs/share/apps/spaceranger/1.2.1/external/martian/bin/mrjob /gpfs/share/apps/spaceranger/1.2.1/lib/bin/cr_lib martian write_pos_bam main /gpfs/data/yanailab/public/linda_share/maayan_STalign/ST358_A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_RNA_COUNTER/_BASIC_SPATIAL_RNA_COUNTER/WRITE_POS_BAM/fork0/chnk10-ufe8a680091 /gpfs/data/yanailab/public/linda_share/maayan_STalign/ST358_A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_RNA_COUNTER/_BASIC_SPATIAL_RNA_COUNTER/WRITE_POS_BAM/fork0/chnk10-ufe8a680091/files /gpfs/data/yanailab/public/linda_share/maayan_STalign/ST358_A1/journal/SPATIAL_RNA_COUNTER_CS.SPATIAL_RNA_COUNTER._BASIC_SPATIAL_RNA_COUNTER.WRITE_POS_BAM.fork0.chnk10.ufe8a680091 
                              220378  154388     137     5         0  235332         0      52   /gpfs/share/apps/spaceranger/1.2.1/lib/bin/cr_lib martian write_pos_bam main /gpfs/data/yanailab/public/linda_share/maayan_STalign/ST358_A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_RNA_COUNTER/_BASIC_SPATIAL_RNA_COUNTER/WRITE_POS_BAM/fork0/chnk10-ufe8a680091 /gpfs/data/yanailab/public/linda_share/maayan_STalign/ST358_A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_RNA_COUNTER/_BASIC_SPATIAL_RNA_COUNTER/WRITE_POS_BAM/fork0/chnk10-ufe8a680091/files /gpfs/data/yanailab/public/linda_share/maayan_STalign/ST358_A1/journal/SPATIAL_RNA_COUNTER_CS.SPATIAL_RNA_COUNTER._BASIC_SPATIAL_RNA_COUNTER.WRITE_POS_BAM.fork0.chnk10.ufe8a680091 
2023-05-19 19:11:01 [monitor] Stage exceeded its address space quota (using 377.1, allowed 5G)
2023-05-19 19:11:06 [monitor] Process tree:
                                 PID VSZ(mb) RSS(mb) Procs  Read(mb) (calls) Write(mb) (calls) COMMAND
                              220371  231774      10     7         0     352         0      27 /gpfs/share/apps/spaceranger/1.2.1/external/martian/bin/mrjob /gpfs/share/apps/spaceranger/1.2.1/lib/bin/cr_lib martian write_pos_bam main /gpfs/data/yanailab/public/linda_share/maayan_STalign/ST358_A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_RNA_COUNTER/_BASIC_SPATIAL_RNA_COUNTER/WRITE_POS_BAM/fork0/chnk10-ufe8a680091 /gpfs/data/yanailab/public/linda_share/maayan_STalign/ST358_A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_RNA_COUNTER/_BASIC_SPATIAL_RNA_COUNTER/WRITE_POS_BAM/fork0/chnk10-ufe8a680091/files /gpfs/data/yanailab/public/linda_share/maayan_STalign/ST358_A1/journal/SPATIAL_RNA_COUNTER_CS.SPATIAL_RNA_COUNTER._BASIC_SPATIAL_RNA_COUNTER.WRITE_POS_BAM.fork0.chnk10.ufe8a680091 
                              220378  154388     137     5         0  239290         0      59   /gpfs/share/apps/spaceranger/1.2.1/lib/bin/cr_lib martian write_pos_bam main /gpfs/data/yanailab/public/linda_share/maayan_STalign/ST358_A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_RNA_COUNTER/_BASIC_SPATIAL_RNA_COUNTER/WRITE_POS_BAM/fork0/chnk10-ufe8a680091 /gpfs/data/yanailab/public/linda_share/maayan_STalign/ST358_A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_RNA_COUNTER/_BASIC_SPATIAL_RNA_COUNTER/WRITE_POS_BAM/fork0/chnk10-ufe8a680091/files /gpfs/data/yanailab/public/linda_share/maayan_STalign/ST358_A1/journal/SPATIAL_RNA_COUNTER_CS.SPATIAL_RNA_COUNTER._BASIC_SPATIAL_RNA_COUNTER.WRITE_POS_BAM.fork0.chnk10.ufe8a680091 
2023-05-19 19:11:06 [monitor] Stage exceeded its address space quota (using 377.1, allowed 5G)
2023-05-19 19:11:11 [monitor] Process tree:
                                 PID VSZ(mb) RSS(mb) Procs  Read(mb) (calls) Write(mb) (calls) COMMAND
                              220371  231774      10     7         0     390         0      29 /gpfs/share/apps/spaceranger/1.2.1/external/martian/bin/mrjob /gpfs/share/apps/spaceranger/1.2.1/lib/bin/cr_lib martian write_pos_bam main /gpfs/data/yanailab/public/linda_share/maayan_STalign/ST358_A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_RNA_COUNTER/_BASIC_SPATIAL_RNA_COUNTER/WRITE_POS_BAM/fork0/chnk10-ufe8a680091 /gpfs/data/yanailab/public/linda_share/maayan_STalign/ST358_A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_RNA_COUNTER/_BASIC_SPATIAL_RNA_COUNTER/WRITE_POS_BAM/fork0/chnk10-ufe8a680091/files /gpfs/data/yanailab/public/linda_share/maayan_STalign/ST358_A1/journal/SPATIAL_RNA_COUNTER_CS.SPATIAL_RNA_COUNTER._BASIC_SPATIAL_RNA_COUNTER.WRITE_POS_BAM.fork0.chnk10.ufe8a680091 
                              220378  154388     137     5         0  243352         0      66   /gpfs/share/apps/spaceranger/1.2.1/lib/bin/cr_lib martian write_pos_bam main /gpfs/data/yanailab/public/linda_share/maayan_STalign/ST358_A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_RNA_COUNTER/_BASIC_SPATIAL_RNA_COUNTER/WRITE_POS_BAM/fork0/chnk10-ufe8a680091 /gpfs/data/yanailab/public/linda_share/maayan_STalign/ST358_A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_RNA_COUNTER/_BASIC_SPATIAL_RNA_COUNTER/WRITE_POS_BAM/fork0/chnk10-ufe8a680091/files /gpfs/data/yanailab/public/linda_share/maayan_STalign/ST358_A1/journal/SPATIAL_RNA_COUNTER_CS.SPATIAL_RNA_COUNTER._BASIC_SPATIAL_RNA_COUNTER.WRITE_POS_BAM.fork0.chnk10.ufe8a680091 
2023-05-19 19:11:11 [monitor] Stage exceeded its address space quota (using 377.1, allowed 5G)
2023-05-19 19:11:16 [monitor] Process tree:
                                 PID VSZ(mb) RSS(mb) Procs  Read(mb) (calls) Write(mb) (calls) COMMAND
                              220371  231774      10     7         0     428         0      31 /gpfs/share/apps/spaceranger/1.2.1/external/martian/bin/mrjob /gpfs/share/apps/spaceranger/1.2.1/lib/bin/cr_lib martian write_pos_bam main /gpfs/data/yanailab/public/linda_share/maayan_STalign/ST358_A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_RNA_COUNTER/_BASIC_SPATIAL_RNA_COUNTER/WRITE_POS_BAM/fork0/chnk10-ufe8a680091 /gpfs/data/yanailab/public/linda_share/maayan_STalign/ST358_A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_RNA_COUNTER/_BASIC_SPATIAL_RNA_COUNTER/WRITE_POS_BAM/fork0/chnk10-ufe8a680091/files /gpfs/data/yanailab/public/linda_share/maayan_STalign/ST358_A1/journal/SPATIAL_RNA_COUNTER_CS.SPATIAL_RNA_COUNTER._BASIC_SPATIAL_RNA_COUNTER.WRITE_POS_BAM.fork0.chnk10.ufe8a680091 
                              220378  154388     137     5         0  247428         0      74   /gpfs/share/apps/spaceranger/1.2.1/lib/bin/cr_lib martian write_pos_bam main /gpfs/data/yanailab/public/linda_share/maayan_STalign/ST358_A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_RNA_COUNTER/_BASIC_SPATIAL_RNA_COUNTER/WRITE_POS_BAM/fork0/chnk10-ufe8a680091 /gpfs/data/yanailab/public/linda_share/maayan_STalign/ST358_A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_RNA_COUNTER/_BASIC_SPATIAL_RNA_COUNTER/WRITE_POS_BAM/fork0/chnk10-ufe8a680091/files /gpfs/data/yanailab/public/linda_share/maayan_STalign/ST358_A1/journal/SPATIAL_RNA_COUNTER_CS.SPATIAL_RNA_COUNTER._BASIC_SPATIAL_RNA_COUNTER.WRITE_POS_BAM.fork0.chnk10.ufe8a680091 
2023-05-19 19:11:16 [monitor] Stage exceeded its address space quota (using 377.1, allowed 5G)
2023-05-19 19:11:21 [monitor] Process tree:
                                 PID VSZ(mb) RSS(mb) Procs  Read(mb) (calls) Write(mb) (calls) COMMAND
                              220371  231774      10     7         0     466         0      33 /gpfs/share/apps/spaceranger/1.2.1/external/martian/bin/mrjob /gpfs/share/apps/spaceranger/1.2.1/lib/bin/cr_lib martian write_pos_bam main /gpfs/data/yanailab/public/linda_share/maayan_STalign/ST358_A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_RNA_COUNTER/_BASIC_SPATIAL_RNA_COUNTER/WRITE_POS_BAM/fork0/chnk10-ufe8a680091 /gpfs/data/yanailab/public/linda_share/maayan_STalign/ST358_A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_RNA_COUNTER/_BASIC_SPATIAL_RNA_COUNTER/WRITE_POS_BAM/fork0/chnk10-ufe8a680091/files /gpfs/data/yanailab/public/linda_share/maayan_STalign/ST358_A1/journal/SPATIAL_RNA_COUNTER_CS.SPATIAL_RNA_COUNTER._BASIC_SPATIAL_RNA_COUNTER.WRITE_POS_BAM.fork0.chnk10.ufe8a680091 
                              220378  154388     137     5         0  251547         0      82   /gpfs/share/apps/spaceranger/1.2.1/lib/bin/cr_lib martian write_pos_bam main /gpfs/data/yanailab/public/linda_share/maayan_STalign/ST358_A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_RNA_COUNTER/_BASIC_SPATIAL_RNA_COUNTER/WRITE_POS_BAM/fork0/chnk10-ufe8a680091 /gpfs/data/yanailab/public/linda_share/maayan_STalign/ST358_A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_RNA_COUNTER/_BASIC_SPATIAL_RNA_COUNTER/WRITE_POS_BAM/fork0/chnk10-ufe8a680091/files /gpfs/data/yanailab/public/linda_share/maayan_STalign/ST358_A1/journal/SPATIAL_RNA_COUNTER_CS.SPATIAL_RNA_COUNTER._BASIC_SPATIAL_RNA_COUNTER.WRITE_POS_BAM.fork0.chnk10.ufe8a680091 
2023-05-19 19:11:21 [monitor] Stage exceeded its address space quota (using 377.1, allowed 5G)
2023-05-19 19:11:26 [monitor] Process tree:
                                 PID VSZ(mb) RSS(mb) Procs  Read(mb) (calls) Write(mb) (calls) COMMAND
                              220371  231774      10     7         0     505         0      36 /gpfs/share/apps/spaceranger/1.2.1/external/martian/bin/mrjob /gpfs/share/apps/spaceranger/1.2.1/lib/bin/cr_lib martian write_pos_bam main /gpfs/data/yanailab/public/linda_share/maayan_STalign/ST358_A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_RNA_COUNTER/_BASIC_SPATIAL_RNA_COUNTER/WRITE_POS_BAM/fork0/chnk10-ufe8a680091 /gpfs/data/yanailab/public/linda_share/maayan_STalign/ST358_A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_RNA_COUNTER/_BASIC_SPATIAL_RNA_COUNTER/WRITE_POS_BAM/fork0/chnk10-ufe8a680091/files /gpfs/data/yanailab/public/linda_share/maayan_STalign/ST358_A1/journal/SPATIAL_RNA_COUNTER_CS.SPATIAL_RNA_COUNTER._BASIC_SPATIAL_RNA_COUNTER.WRITE_POS_BAM.fork0.chnk10.ufe8a680091 
                              220378  154388     142     5         0  255956         0      89   /gpfs/share/apps/spaceranger/1.2.1/lib/bin/cr_lib martian write_pos_bam main /gpfs/data/yanailab/public/linda_share/maayan_STalign/ST358_A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_RNA_COUNTER/_BASIC_SPATIAL_RNA_COUNTER/WRITE_POS_BAM/fork0/chnk10-ufe8a680091 /gpfs/data/yanailab/public/linda_share/maayan_STalign/ST358_A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_RNA_COUNTER/_BASIC_SPATIAL_RNA_COUNTER/WRITE_POS_BAM/fork0/chnk10-ufe8a680091/files /gpfs/data/yanailab/public/linda_share/maayan_STalign/ST358_A1/journal/SPATIAL_RNA_COUNTER_CS.SPATIAL_RNA_COUNTER._BASIC_SPATIAL_RNA_COUNTER.WRITE_POS_BAM.fork0.chnk10.ufe8a680091 
2023-05-19 19:11:26 [monitor] Stage exceeded its address space quota (using 377.1, allowed 5G)
2023-05-19 19:11:31 [monitor] Process tree:
                                 PID VSZ(mb) RSS(mb) Procs  Read(mb) (calls) Write(mb) (calls) COMMAND
                              220371  231774      10     7         0     543         0      38 /gpfs/share/apps/spaceranger/1.2.1/external/martian/bin/mrjob /gpfs/share/apps/spaceranger/1.2.1/lib/bin/cr_lib martian write_pos_bam main /gpfs/data/yanailab/public/linda_share/maayan_STalign/ST358_A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_RNA_COUNTER/_BASIC_SPATIAL_RNA_COUNTER/WRITE_POS_BAM/fork0/chnk10-ufe8a680091 /gpfs/data/yanailab/public/linda_share/maayan_STalign/ST358_A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_RNA_COUNTER/_BASIC_SPATIAL_RNA_COUNTER/WRITE_POS_BAM/fork0/chnk10-ufe8a680091/files /gpfs/data/yanailab/public/linda_share/maayan_STalign/ST358_A1/journal/SPATIAL_RNA_COUNTER_CS.SPATIAL_RNA_COUNTER._BASIC_SPATIAL_RNA_COUNTER.WRITE_POS_BAM.fork0.chnk10.ufe8a680091 
                              220378  154388     143     5         0  260174         0      96   /gpfs/share/apps/spaceranger/1.2.1/lib/bin/cr_lib martian write_pos_bam main /gpfs/data/yanailab/public/linda_share/maayan_STalign/ST358_A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_RNA_COUNTER/_BASIC_SPATIAL_RNA_COUNTER/WRITE_POS_BAM/fork0/chnk10-ufe8a680091 /gpfs/data/yanailab/public/linda_share/maayan_STalign/ST358_A1/SPATIAL_RNA_COUNTER_CS/SPATIAL_RNA_COUNTER/_BASIC_SPATIAL_RNA_COUNTER/WRITE_POS_BAM/fork0/chnk10-ufe8a680091/files /gpfs/data/yanailab/public/linda_share/maayan_STalign/ST358_A1/journal/SPATIAL_RNA_COUNTER_CS.SPATIAL_RNA_COUNTER._BASIC_SPATIAL_RNA_COUNTER.WRITE_POS_BAM.fork0.chnk10.ufe8a680091 
2023-05-19 19:11:31 [monitor] Stage exceeded its address space quota (using 377.1, allowed 5G)
2023-05-19 19:11:36 [time] __end__
