erv median_tumor mean_normal logfc n_sample AluJr_dup72800:AluJr:Alu:SINE 1.23964662842663 0.1893768988027336 2.710596667936884 1118.0 L1PA6_dup546:L1PA6:L1:LINE 1.7937374114470308 0.2927699401366612 2.615129367851048 1118.0 LTR6B_dup144:LTR6B:ERV1:LTR 1.5768830587145717 0.0519581292241098 4.923582377102355 1118.0 Tigger4b_dup2156:Tigger4b:TcMar-Tigger:DNA 1.174578741992801 0.4872832370944458 1.2693109339837194 1118.0 MER5B_dup24322:MER5B:hAT-Charlie:DNA 1.0018449255777928 0.0526691295406112 4.249557786126659 1118.0 AluJr_dup22765:AluJr:Alu:SINE 1.0365889890563371 0.0077154739460939 7.069873477479228 1118.0 AluJb_dup73373:AluJb:Alu:SINE 1.312226264133351 0.000524734054382 11.288142459948764 1118.0 AluJr_dup44423:AluJr:Alu:SINE 1.448848792608504 0.1951206886456881 2.8924683774704856 1118.0 MLT1K_dup15840:MLT1K:ERVL-MaLR:LTR 1.252809894913845 0.3327659589692898 1.912587749991205 1118.0 L1PREC2_dup2031:L1PREC2:L1:LINE 3.2653957937858102 0.4005854407356963 3.027075976784894 1118.0 L1M5_dup19360:L1M5:L1:LINE 1.2780489876277137 0.3378610768711136 1.9194410756835796 1118.0 FAM_dup1589:FAM:Alu:SINE 1.4978777365811622 0.4245540573304889 1.8188997043594133 1118.0 OldhAT1_dup3754:OldhAT1:hAT-Ac:DNA 3.712889256223377 0.229716003740126 4.014619010502115 1118.0 MLT1E2_dup3701:MLT1E2:ERVL-MaLR:LTR 1.0469308997536917 0.4645323830344211 1.1723151466758686 1118.0 AluSp_dup12528:AluSp:Alu:SINE 1.224334411348866 0.0295741133308953 5.371518940001761 1118.0 AluSx4_dup7329:AluSx4:Alu:SINE 1.17103784045027 0.0027908800155052 8.71285187800857 1118.0 AluJr_dup60896:AluJr:Alu:SINE 1.0466735554859137 0.4901770849290646 1.0944366067297795 1118.0 LTR8_dup2971:LTR8:ERV1:LTR 3.813345259477569 0.2447948664736123 3.96141194918694 1118.0 AluSp_dup1142:AluSp:Alu:SINE 1.2367509742248637 0.2089834518128584 2.56509442265906 1118.0 AluJo_dup50387:AluJo:Alu:SINE 1.2356741261591777 0.0025522745462867 8.919299081266882 1118.0 L1ME1_dup6617:L1ME1:L1:LINE 1.0389943507160753 0.4453241998369115 1.2222598919009615 1118.0 L1MC1_dup2137:L1MC1:L1:LINE 1.1049924809326206 0.3234029913481031 1.7726316243039653 1118.0 MER34A_dup1023:MER34A:ERV1:LTR 2.307692945002312 0.0170586342162612 7.079805322429213 1118.0 AluJb_dup107864:AluJb:Alu:SINE 6.1826851386026425 0.0002278324850216 14.727972450481984 1118.0 L1MD2_dup3350:L1MD2:L1:LINE 1.471748955302981 0.265229905058228 2.472216247875386 1118.0 AluSx_dup91179:AluSx:Alu:SINE 6.644873097072843 0.0045621159872568 10.508322805821946 1118.0 AluSz_dup93694:AluSz:Alu:SINE 5.459817524734813 0.1659909287906949 5.0396764276759765 1118.0 AluYf1_dup91:AluYf1:Alu:SINE 1.1530702331186544 0.2721315892790703 2.0831040489780395 1117.0 AluSz_dup102163:AluSz:Alu:SINE 1.9670346053105447 0.0002179491274605 13.139743290182862 1117.0 L1MA2_dup458:L1MA2:L1:LINE 1.0893610844656114 0.4119820528890241 1.4028288394474373 1117.0 SVA_D_dup1229:SVA_D:SVA:Retroposon 1.3973118447151054 0.476847412502663 1.5510544358845504 1117.0 AluSc_dup33256:AluSc:Alu:SINE 1.3427121172630834 0.0277790638852019 5.595008224852621 1117.0 AluSp_dup17171:AluSp:Alu:SINE 2.940347989752261 0.2092895351215914 3.81241482692314 1117.0 AluJr_dup60568:AluJr:Alu:SINE 1.3187661955451615 0.494428858352303 1.41535395476164 1117.0 X9_LINE_dup501:X9_LINE:L1:LINE 1.2284261609601246 0.3437392533533853 1.8374246268553216 1117.0 AluSq2_dup55936:AluSq2:Alu:SINE 1.4648749042390203 0.4463713786081964 1.714461038789496 1117.0 L1MA4A_dup2646:L1MA4A:L1:LINE 1.3248030843428134 0.4304615177296836 1.621821761888374 1117.0 AluSx3_dup23923:AluSx3:Alu:SINE 1.0115924399530325 0.422790804795314 1.25861225505233 1116.0 AluJo_dup72535:AluJo:Alu:SINE 1.072166124225489 0.2207392627405336 2.280113289333511 1116.0 LTR88b_dup1331:LTR88b:Gypsy:LTR 1.5008621664891566 0.0198811332927147 6.23824768335038 1116.0 Charlie4a_dup1193:Charlie4a:hAT-Charlie:DNA 1.4121965494734172 0.461154855418863 1.6146177039098435 1116.0 Tigger14a_dup108:Tigger14a:TcMar-Tigger:DNA 1.425115269647805 0.0078075927274636 7.511985101612689 1116.0 L1MDa_dup787:L1MDa:L1:LINE 1.1070545606080997 0.3438758665129249 1.6867665513236378 1116.0 L1M3_dup291:L1M3:L1:LINE 1.2264024533448827 0.3648644439828962 1.749000015793588 1116.0 HAL1M8_dup1066:HAL1M8:L1:LINE 1.4365514303377762 0.3402307778492503 2.078024083440962 1115.0 AluSz6_dup13207:AluSz6:Alu:SINE 1.3658105306393111 0.3417246467607216 1.99885115203046 1114.0 L1MC4_dup5198:L1MC4:L1:LINE 1.039113181553328 0.436336456584229 1.2518398797530172 1114.0 AluSc_dup26247:AluSc:Alu:SINE 1.1850906191492832 0.0255733500930304 5.534212405130601 1114.0 AluSc_dup13832:AluSc:Alu:SINE 1.9970979014239396 0.4159080058002372 2.263568697332188 1114.0 L1HS_dup943:L1HS:L1:LINE 1.7163442103331956 0.3790261737479779 2.1789695296255576 1113.0 HERVIP10FH-int_dup362:HERVIP10FH-int:ERV1:LTR 1.1546739320063977 0.4904219547388916 1.2353900362008274 1112.0 AluSz_dup37824:AluSz:Alu:SINE 1.2831208830429033 0.0026438264880892 8.922813880846338 1111.0 L1ME1_dup27121:L1ME1:L1:LINE 1.3761530408533622 0.1398476319207532 3.2987131903235807 1111.0 L1MA1_dup2411:L1MA1:L1:LINE 1.4168968050158632 0.4902543273978149 1.531132418140525 1109.0 L1PA6_dup3351:L1PA6:L1:LINE 1.0837416687006511 0.4732955736906382 1.1952075677065177 1109.0 AluJo_dup70939:AluJo:Alu:SINE 1.2931675943230712 0.002178492838753 9.21336317422048 1107.0 MLT1J_dup2740:MLT1J:ERVL-MaLR:LTR 1.1220002463625458 0.3071718816092442 1.8689549292347916 1105.0 AluSx4_dup3234:AluSx4:Alu:SINE 1.000637443544703 0.3747890471528333 1.416768646297552 1105.0 SVA_E_dup408:SVA_E:SVA:Retroposon 1.7597788646533443 0.275459818795955 2.6754803559775207 1099.0 AluSz6_dup47341:AluSz6:Alu:SINE 1.2252590838167468 0.4058010139650649 1.5942424675906437 1098.0 L1MDa_dup2979:L1MDa:L1:LINE 1.131216994764535 0.1455468842828891 2.958319838476249 1095.0 AluSx4_dup6174:AluSx4:Alu:SINE 1.5035069630239806 0.1612250040882752 3.221184138078707 1094.0 HERVK-int_dup102:HERVK-int:ERVK:LTR 1.228373801633838 0.4463608682754711 1.4604671892953318 1092.0 AluSx1_dup69050:AluSx1:Alu:SINE 2.992508972031861 0.0023214614879023 10.332106509891494 1092.0 AluJo_dup38169:AluJo:Alu:SINE 1.28116923039401 0.2891735284269425 2.147453658691913 1090.0 AluJo_dup6177:AluJo:Alu:SINE 1.1691048675416604 0.0337626167768332 5.113833809075441 1090.0 L1PA2_dup23:L1PA2:L1:LINE 2.6220458302319 0.3152228216366226 3.056249009827108 1073.0 Charlie4a_dup2779:Charlie4a:hAT-Charlie:DNA 1.2174516623155418 0.11257653727319 3.434886409252538 1071.0 PRIMA4-int_dup162:PRIMA4-int:ERV1:LTR 1.1608591550830891 0.2787400416311959 2.0582007744571498 1069.0 MER58A_dup7958:MER58A:hAT-Charlie:DNA 1.2701410887138258 0.1815606440068583 2.806465346262621 1068.0 L1PA4_dup5338:L1PA4:L1:LINE 2.487402767257376 0.1883535626029016 3.723124905281157 1064.0 L1PA5_dup80:L1PA5:L1:LINE 1.2785734686156636 0.3176946514558749 2.00882235533652 1050.0 L1M4_dup9704:L1M4:L1:LINE 1.007449014226046 0.3405167881932435 1.5649089945520105 1043.0 MER30_dup2921:MER30:hAT-Charlie:DNA 2.520849751425411 0.481974385668547 2.386881750573341 1039.0 L1PA2_dup4416:L1PA2:L1:LINE 2.753557969864612 0.1956457574041021 3.814981250734152 1023.0 L1PA5_dup4809:L1PA5:L1:LINE 2.0748411893251344 0.1855937726213876 3.482780706715068 1019.0 L1PA5_dup4810:L1PA5:L1:LINE 1.422513406389534 0.3642032674974997 1.9656264783723316 1014.0 L1PA6_dup2643:L1PA6:L1:LINE 2.583825100035468 0.19822291764206 3.704312741647729 1001.0 L1MA7_dup880:L1MA7:L1:LINE 1.1667545380148585 0.195424599357389 2.5778170933814386 999.0 MSTC_dup1332:MSTC:ERVL-MaLR:LTR 1.077612898514053 0.2215295679602786 2.282267848475567 980.0 L1PA4_dup2646:L1PA4:L1:LINE 1.122567395826393 0.0182259492179891 5.944664299839779 964.0 AluJb_dup87692:AluJb:Alu:SINE 1.6183868865835913 0.000958979254526 10.720769308833734 925.0 HERV9-int_dup251:HERV9-int:ERV1:LTR 1.445155976069553 0.1872110326007009 2.948487849070049 915.0 L1ME2_dup7979:L1ME2:L1:LINE 1.714998306189088 0.3314429430361172 2.3713747105672125 913.0 MLT1E1A_dup2252:MLT1E1A:ERVL-MaLR:LTR 2.0650608296337305 0.3812451439102853 2.4373934125941457 912.0 AluSp_dup48944:AluSp:Alu:SINE 1.391337234433088 0.3319044745033751 2.067632160818765 910.0 MER11B_dup350:MER11B:ERVK:LTR 2.119350567345781 0.3760945135003192 2.494455081943742 908.0 L1MB8_dup10026:L1MB8:L1:LINE 1.818091583235971 0.1547631962056039 3.55429054045504 905.0 AluY_dup60988:AluY:Alu:SINE 1.278895298021966 0.195661959147867 2.7084629592447618 902.0 AluJr_dup48284:AluJr:Alu:SINE 1.3403647779896786 0.2950834676226461 2.1834306815526108 901.0 L1MC1_dup8579:L1MC1:L1:LINE 1.4826481801473324 0.1242400863333174 3.5769736566254045 901.0 L1PB1_dup1360:L1PB1:L1:LINE 1.9321083727386597 0.2188363794537581 3.1422515203665773 901.0 L1M5_dup34278:L1M5:L1:LINE 2.025916066392053 0.420848491717157 2.267201552618872 899.0 Charlie15a_dup1853:Charlie15a:hAT-Charlie:DNA 2.4622128612138474 0.3881662423869095 2.665208927995846 899.0 MER6_dup516:MER6:TcMar-Tigger:DNA 1.9632261719609156 0.4373635086404003 2.1663216274781734 897.0 Tigger19a_dup2136:Tigger19a:TcMar-Tigger:DNA 1.8621662848936809 0.3270386729048614 2.5094487540584383 895.0 L1MA4A_dup4026:L1MA4A:L1:LINE 1.15444516853964 0.3790369947908348 1.606789082193256 894.0 L1MC1_dup8576:L1MC1:L1:LINE 1.0679646287321105 0.0723441311962196 3.88384407001487 888.0 AluSc_dup13223:AluSc:Alu:SINE 1.4006594494327582 0.0432644137242472 5.016781564404799 886.0 L1MA4A_dup4114:L1MA4A:L1:LINE 1.4937045395982376 0.2341122362527298 2.6736225595060183 874.0 MLT1A_dup5828:MLT1A:ERVL-MaLR:LTR 1.0228827493045072 0.195432840154895 2.387895961285886 866.0 AluY_dup60986:AluY:Alu:SINE 1.330176119966912 0.035517132916785 5.226958339665412 849.0 LTR8B_dup1149:LTR8B:ERV1:LTR 1.2841178080751146 0.0005048542445534 11.312623014000296 817.0 AluSx1_dup39678:AluSx1:Alu:SINE 1.1076550382052968 0.0024502072239592 8.820389162291917 755.0