erv median_tumor mean_normal logfc n_sample AluJo_dup65935:AluJo:Alu:SINE 3.1232314964255035 0.4639684686261284 2.7509408390328294 483.0 AluSz_dup93694:AluSz:Alu:SINE 7.731269292554917 0.1659909287906949 5.541528982935045 483.0 L1MC5_dup2220:L1MC5:L1:LINE 3.828069485315853 0.4393122126493036 3.123298505916152 483.0 L1MD2_dup3350:L1MD2:L1:LINE 2.4169742649477106 0.265229905058228 3.187886756197466 483.0 AluJb_dup67344:AluJb:Alu:SINE 1.349644443152371 0.4295932882606487 1.6515360280805091 483.0 MER49_dup1305:MER49:ERV1:LTR 1.209497246225798 0.4412608656295442 1.454703775675969 483.0 L1PB1_dup10508:L1PB1:L1:LINE 2.941020511291588 0.4940460713329822 2.5735993569204574 483.0 LTR8_dup2971:LTR8:ERV1:LTR 3.615424572808221 0.2447948664736123 3.884519869094821 483.0 L1PA6_dup546:L1PA6:L1:LINE 4.547726375381561 0.2927699401366612 3.957306114656712 483.0 AluJb_dup107864:AluJb:Alu:SINE 6.003751951280898 0.0002278324850216 14.685603286514622 483.0 AluJr_dup30890:AluJr:Alu:SINE 1.6564926727255278 0.4309280836060434 1.9426127947268967 483.0 AluSz6_dup5069:AluSz6:Alu:SINE 1.0621030440935346 0.2745788286115291 1.951631445703044 483.0 AluSz6_dup43940:AluSz6:Alu:SINE 3.685936671004459 0.3287952390102888 3.486769969971665 483.0 L1MC1_dup2137:L1MC1:L1:LINE 2.548944203961612 0.3234029913481031 2.978494864972482 483.0 L1MA1_dup2411:L1MA1:L1:LINE 1.7892693935927455 0.4902543273978149 1.8677683468420847 482.0 AluJb_dup105930:AluJb:Alu:SINE 1.0179588767749213 0.4201583608019265 1.2766741830267476 482.0 AluSc_dup13832:AluSc:Alu:SINE 3.3176111198493 0.4159080058002372 2.995808427181772 482.0 OldhAT1_dup3754:OldhAT1:hAT-Ac:DNA 2.8845354374206424 0.229716003740126 3.65041571317871 482.0 L1PA3_dup1321:L1PA3:L1:LINE 1.892281258594111 0.2637255971055219 2.8430170285720164 482.0 AluSz6_dup43939:AluSz6:Alu:SINE 2.2506602683828447 0.1577247637628512 3.834867206903908 482.0 AluSp_dup42947:AluSp:Alu:SINE 1.032795899586597 0.1918471209114514 2.4285261585718025 482.0 AluSz_dup101715:AluSz:Alu:SINE 1.4532773959523846 0.4395440284853391 1.7252305149077165 482.0 AluSx_dup105968:AluSx:Alu:SINE 4.066636172732648 0.3124682729523712 3.702054308255191 482.0 MER20_dup13649:MER20:hAT-Charlie:DNA 1.190820930416777 0.2550138660579453 2.223308885327269 482.0 MER65-int_dup829:MER65-int:ERV1:LTR 4.724704930580082 0.0139534672083954 8.403456769351816 482.0 L1MB4_dup8351:L1MB4:L1:LINE 4.338323541633806 0.1814582314154843 4.579428241915883 482.0 L1ME1_dup14741:L1ME1:L1:LINE 1.4707505823140987 0.2188578600898351 2.748486504298828 482.0 THE1D-int_dup348:THE1D-int:ERVL-MaLR:LTR 3.062994120509857 0.4818669853647762 2.668235732885329 482.0 L1M2_dup4231:L1M2:L1:LINE 4.120048319926696 0.1764610938163524 4.545239219508806 482.0 AluSz_dup93949:AluSz:Alu:SINE 3.833991762002796 0.3588066818941023 3.4175685748531266 481.0 AluSc_dup17965:AluSc:Alu:SINE 1.068588672013086 0.1281315321376564 3.0600091683981194 481.0 AluSx1_dup105715:AluSx1:Alu:SINE 1.057486810986726 0.069666496377167 3.924030849867155 481.0 AluSp_dup1142:AluSp:Alu:SINE 1.8451840621425188 0.2089834518128584 3.142304122938002 481.0 L1MC1_dup2138:L1MC1:L1:LINE 1.868897465743888 0.2278259033593264 3.0361837268678658 481.0 AluJb_dup115673:AluJb:Alu:SINE 5.091546338129726 0.4649285931816585 3.453022819724816 481.0 L1PA8_dup4178:L1PA8:L1:LINE 4.057818296907117 0.2856926403965029 3.8281684875659816 481.0 AluJb_dup92890:AluJb:Alu:SINE 3.194708456175912 0.2068277339241644 3.949182721751093 481.0 AluJr_dup44423:AluJr:Alu:SINE 1.1282089748604902 0.1951206886456881 2.5315956585684107 481.0 AluY_dup97854:AluY:Alu:SINE 4.029285449154428 0.0051946344782714 9.599286062393093 481.0 AluSx3_dup29941:AluSx3:Alu:SINE 1.5544935485926912 0.0583639242761596 4.735223928530226 481.0 AluSc8_dup3929:AluSc8:Alu:SINE 1.3309598740929134 0.4240188533349215 1.6502667588906177 481.0 X9_LINE_dup501:X9_LINE:L1:LINE 1.2483764863794635 0.3437392533533853 1.8606665739475727 481.0 MLT1C_dup18222:MLT1C:ERVL-MaLR:LTR 3.4425711314560425 0.3136195045638514 3.456399272905568 481.0 AluSx4_dup10100:AluSx4:Alu:SINE 4.143453876782423 0.4987342787699046 3.054490592618038 481.0 SVA_D_dup1229:SVA_D:SVA:Retroposon 1.675571116190744 0.476847412502663 1.8130533261889852 481.0 AluSc8_dup7305:AluSc8:Alu:SINE 1.025799963262684 0.0449135051643763 4.513456296426918 481.0 AluSx1_dup105873:AluSx1:Alu:SINE 1.161203101244476 0.0188810566591458 5.942537013966044 480.0 AluJr_dup79343:AluJr:Alu:SINE 1.3460544452102 0.0536068752531314 4.650174912231466 480.0 HUERS-P3-int_dup372:HUERS-P3-int:ERV1:LTR 1.590563956605098 0.0102572563970316 7.276749682015343 480.0 AluSx_dup91179:AluSx:Alu:SINE 16.05338004258843 0.0045621159872568 11.78088634242676 480.0 L1PB1_dup6616:L1PB1:L1:LINE 1.1358253178546305 0.0196351871970747 5.85415581270088 480.0 L1MA5_dup3310:L1MA5:L1:LINE 2.1440072381684363 0.0494638783449475 5.437790603670655 480.0 AluSx3_dup29942:AluSx3:Alu:SINE 2.044018751923101 0.0786573993334847 4.699682134529506 480.0 AluSx1_dup105716:AluSx1:Alu:SINE 3.4810439203677856 0.3428079823606823 3.34404740824348 480.0 L1MB8_dup3477:L1MB8:L1:LINE 1.6485885596924217 0.3003449133866926 2.4565392526569934 479.0 AluSg7_dup3470:AluSg7:Alu:SINE 1.1476481431393448 0.0120808203020236 6.569818165747085 479.0 L1PA8_dup4283:L1PA8:L1:LINE 1.237907765894274 0.1348659474275502 3.1983057957222303 479.0 L1MB2_dup2034:L1MB2:L1:LINE 1.234255234257108 0.2358614318871796 2.387629330137309 479.0 AluSc_dup33256:AluSc:Alu:SINE 1.0450281466574736 0.0277790638852019 5.233400006597047 479.0 AluSp_dup17171:AluSp:Alu:SINE 2.9082291479174875 0.2092895351215914 3.7965688669273394 479.0 AluSx_dup71151:AluSx:Alu:SINE 1.2767231101948278 0.4573538105707593 1.4810630974867245 479.0 L1MEc_dup13396:L1MEc:L1:LINE 1.620703183190708 0.1673385782039856 3.2757779113099983 479.0 AluY_dup35561:AluY:Alu:SINE 1.1748435911146424 0.1243112229828391 3.240440245365667 479.0 LTR16B2_dup1420:LTR16B2:ERVL:LTR 2.1926953284573405 0.1104633581990186 4.311065568041232 479.0 AluJb_dup103497:AluJb:Alu:SINE 1.236851903517141 0.3217908410714272 1.9424775979635764 479.0 HERVH-int_dup4765:HERVH-int:ERV1:LTR 2.073122916940509 0.3800345561863495 2.447603144861485 479.0 AluSz_dup95216:AluSz:Alu:SINE 1.3112723622281253 0.3989752402623974 1.7165962534101538 478.0 MER5B_dup23397:MER5B:hAT-Charlie:DNA 1.7620663484233876 0.0792269695953002 4.475132817262844 478.0 AluY_dup64372:AluY:Alu:SINE 1.6672929492750446 0.3489879065155246 2.256258664548002 478.0 AluJr_dup72800:AluJr:Alu:SINE 1.9610225923897493 0.1893768988027336 3.3722738974408046 478.0 AluSp_dup11449:AluSp:Alu:SINE 1.1027439132137695 0.46236865931507 1.2539822810236028 478.0 AluSx1_dup14869:AluSx1:Alu:SINE 1.0392758270608995 0.1270827311353014 3.031738695273603 478.0 AluSx4_dup3234:AluSx4:Alu:SINE 1.4747745213637276 0.3747890471528333 1.9763436999783703 478.0 MER65-int_dup830:MER65-int:ERV1:LTR 2.2615833292983227 0.0105726313913534 7.740854854058701 478.0 MLT1B_dup948:MLT1B:ERVL-MaLR:LTR 1.062852436806843 0.1940662173317227 2.453320407905164 478.0 MLT1A1_dup678:MLT1A1:ERVL-MaLR:LTR 1.0766326220206477 0.0336665895774405 4.999064650949978 478.0 L1MEc_dup3336:L1MEc:L1:LINE 1.13586293163383 0.2420686587065728 2.230300543671343 478.0 MER34A_dup1023:MER34A:ERV1:LTR 1.02531724208739 0.0170586342162612 5.909424407752974 478.0 LTR16D_dup814:LTR16D:ERVL:LTR 1.0097989848873832 0.1292670517905187 2.965641626168324 478.0 AluJb_dup73373:AluJb:Alu:SINE 1.6276795936902488 0.000524734054382 11.598942693158426 477.0 MER65-int_dup835:MER65-int:ERV1:LTR 1.820753605061792 0.0130686126071448 7.1222859018755775 477.0 LTR33_dup6907:LTR33:ERVL:LTR 1.5020271884645031 0.1937030753486897 2.9549921632252394 477.0 MLT1D_dup253:MLT1D:ERVL-MaLR:LTR 1.4791642238045395 0.3630010703550197 2.0267365288422448 477.0 AluSc_dup26247:AluSc:Alu:SINE 3.947558539677292 0.0255733500930304 7.270175685113526 477.0 MER4E1_dup202:MER4E1:ERV1:LTR 1.118986753019194 0.0356289563194822 4.97299892386678 477.0 AluJb_dup121098:AluJb:Alu:SINE 1.9674117112839131 0.2333632279839523 3.0756497428285985 477.0 Tigger19b_dup1295:Tigger19b:TcMar-Tigger:DNA 1.0175937895843985 0.2964794116636536 1.779157942239637 477.0 SVA_D_dup628:SVA_D:SVA:Retroposon 1.004965212380795 0.4952733165024275 1.0208487612085102 477.0 AluSz6_dup36815:AluSz6:Alu:SINE 1.1099680225515125 0.0012375329650786 9.808835442904892 477.0 MER65-int_dup826:MER65-int:ERV1:LTR 5.36374670786269 0.0416066207026206 7.010284183072918 476.0 L1MB8_dup1763:L1MB8:L1:LINE 1.5294594278598173 0.259115602067641 2.56135404496417 476.0 AluSz_dup37824:AluSz:Alu:SINE 1.3496941177838604 0.0026438264880892 8.995789272696864 476.0 AluSx1_dup107630:AluSx1:Alu:SINE 1.182438838059655 0.1247445926159485 3.244716377136839 476.0 L1PB4_dup3416:L1PB4:L1:LINE 1.5609702491558273 0.0696235306653889 4.48672425459358 476.0 HERVH-int_dup3527:HERVH-int:ERV1:LTR 8.094520876636611 0.0139942278604804 9.17596999058112 476.0 L1MB4_dup8350:L1MB4:L1:LINE 1.3793009716132458 0.0459558965036179 4.907543503019202 476.0 L1MB7_dup19903:L1MB7:L1:LINE 4.471230206686413 0.3704688365676228 3.5932477318665583 475.0 AluSg_dup33891:AluSg:Alu:SINE 1.232566983441859 0.0052497421470697 7.875203772879873 474.0 AluSp_dup17164:AluSp:Alu:SINE 1.1128196386926228 0.1877517114460719 2.5673218216848963 474.0 L1MB7_dup19902:L1MB7:L1:LINE 3.360602254003264 0.3417949504753551 3.297516813197851 474.0 AluSx1_dup108546:AluSx1:Alu:SINE 1.1583690759143794 0.0026454172374457 8.774383994825119 474.0 AluSz_dup71343:AluSz:Alu:SINE 1.3846622943211524 0.0573341797523608 4.593994892027824 474.0 AluSc_dup32446:AluSc:Alu:SINE 19.17342533549345 0.0040187158861641 12.22008589145089 474.0 AluSg_dup24620:AluSg:Alu:SINE 1.851175919259755 0.0161472712512016 6.841007809808366 473.0 L1MD2_dup2312:L1MD2:L1:LINE 1.025247598227015 0.1719973841498203 2.575513835227558 473.0 AluSz_dup98854:AluSz:Alu:SINE 1.367513856940714 0.2321393134284999 2.558492678997085 473.0 LTR7B_dup599:LTR7B:ERV1:LTR 1.016192942152016 0.1328468061351861 2.935338900717583 472.0 L1MB4_dup8349:L1MB4:L1:LINE 1.915539018183746 0.0855613051879158 4.484648112375966 472.0 AluSz_dup51341:AluSz:Alu:SINE 1.2424955673970632 0.1832918428787378 2.7610262174846696 472.0 L1PA5_dup2765:L1PA5:L1:LINE 1.903650506224423 0.171219590839865 3.4748489480473457 472.0 MER30_dup2921:MER30:hAT-Charlie:DNA 1.6627196260773784 0.481974385668547 1.786516534401278 471.0 AluJo_dup70939:AluJo:Alu:SINE 1.582624031820995 0.002178492838753 9.504772483429116 471.0 HERVH-int_dup4763:HERVH-int:ERV1:LTR 1.1455265893349995 0.1694828300693424 2.7567999164439154 471.0 AluSg_dup14868:AluSg:Alu:SINE 1.043937374381135 0.291097903465529 1.842458813396474 470.0 MSTB_dup6501:MSTB:ERVL-MaLR:LTR 1.279567223268373 0.2367443632259002 2.4342539613984906 470.0 L1PA3_dup1120:L1PA3:L1:LINE 1.852683732690941 0.4358200479832063 2.087812155356973 470.0 L1MB1_dup5686:L1MB1:L1:LINE 1.02323922456008 0.1094493581653525 3.22480807487036 470.0 L1MB7_dup20013:L1MB7:L1:LINE 1.0378350852373954 0.0317096714982434 5.03251047191993 469.0 HERV35I-int_dup77:HERV35I-int:ERV1:LTR 1.3860853119714591 0.1976016791882729 2.810348944558729 468.0 MLT1B_dup10208:MLT1B:ERVL-MaLR:LTR 1.275405936799411 0.1555601839560434 3.035411750785692 468.0 AluSp_dup12528:AluSp:Alu:SINE 1.1205789574276814 0.0295741133308953 5.243765580941712 467.0 AluSx_dup111750:AluSx:Alu:SINE 1.1176837615858768 0.1240420897787655 3.171610406581673 465.0 Charlie4z_dup5110:Charlie4z:hAT-Charlie:DNA 1.5047031278145129 0.03266398521738 5.525634246847834 465.0 MLT1G3_dup1805:MLT1G3:ERVL-MaLR:LTR 2.499159559974538 0.0142088782447376 7.458506541733274 464.0 AluJr_dup25099:AluJr:Alu:SINE 1.002221926009964 0.000819926184699 10.255420350780176 461.0 AluSx1_dup69050:AluSx1:Alu:SINE 13.139330046662629 0.0023214614879023 12.466570749000027 461.0 AluSx3_dup27550:AluSx3:Alu:SINE 1.1813834058751969 0.0460329000413167 4.681668108162006 461.0 THE1B-int_dup1996:THE1B-int:ERVL-MaLR:LTR 1.2346957743909006 0.2358979979729452 2.3879205297171024 457.0 AluSp_dup30039:AluSp:Alu:SINE 1.0360777825034435 0.0074288008312297 7.123787253195352 456.0 L1MC5_dup2219:L1MC5:L1:LINE 1.426517432550395 0.100608666825259 3.825670882253866 456.0 L1PA3_dup1115:L1PA3:L1:LINE 1.763195504976095 0.4680770941019235 1.9133743791474327 454.0 HERVH-int_dup3522:HERVH-int:ERV1:LTR 3.3067715530513007 0.0009310524769523 11.794273275768518 451.0 HERVH-int_dup3525:HERVH-int:ERV1:LTR 2.3360434519655686 0.0028617900308425 9.67293356861668 450.0 AluSp_dup48944:AluSp:Alu:SINE 1.560712430635823 0.3319044745033751 2.233364753692048 450.0 AluY_dup7324:AluY:Alu:SINE 9.241215358437865 0.0815861706738351 6.823614162136336 448.0 HERV1_I-int_dup2:HERV1_I-int:ERV1:LTR 1.0948245018220069 0.0565463038051543 4.275123092635072 448.0 HERVH-int_dup3524:HERVH-int:ERV1:LTR 2.9075701410676067 0.0031813577269869 9.835955675295056 447.0 LTR7Y_dup128:LTR7Y:ERV1:LTR 2.433378595797467 0.000861881152375 11.463184233091887 443.0 AluSz6_dup3545:AluSz6:Alu:SINE 2.41730061421725 0.0414716037207735 5.865129249000173 423.0 MLT1F2_dup937:MLT1F2:ERVL-MaLR:LTR 6.176673419290372 0.4375656225012822 3.819258750906342 422.0 MLT1L_dup10991:MLT1L:ERVL-MaLR:LTR 1.6021649368149065 0.1256829385754321 3.6721619526794966 401.0 L1PB1_dup5905:L1PB1:L1:LINE 2.023350116566841 0.2056128638309657 3.2987435503272207 382.0 AluJb_dup87692:AluJb:Alu:SINE 1.5878392036766538 0.000958979254526 10.69327759552763 371.0 LTR1_dup85:LTR1:ERV1:LTR 1.8197208364654407 0.0003248618387484 12.451603241547168 329.0