erv median_tumor mean_normal logfc n_sample AluSz_dup93694:AluSz:Alu:SINE 5.632816134108665 0.1659909287906949 5.084680072771264 502.0 L1PA6_dup2721:L1PA6:L1:LINE 2.0235021599267444 0.2438478610544489 3.05280116622876 502.0 AluJb_dup107864:AluJb:Alu:SINE 6.353664620380252 0.0002278324850216 14.767327853239337 502.0 AluSp_dup17171:AluSp:Alu:SINE 4.405465577973595 0.2092895351215914 4.395722412967139 502.0 MLT1B_dup948:MLT1B:ERVL-MaLR:LTR 1.0755469260710702 0.1940662173317227 2.470449567379016 502.0 AluJo_dup50387:AluJo:Alu:SINE 1.3433954120990073 0.0025522745462867 9.0398847645808 502.0 AluSz_dup102163:AluSz:Alu:SINE 1.347823609642715 0.0002179491274605 12.59435265418799 502.0 OldhAT1_dup3754:OldhAT1:hAT-Ac:DNA 3.1750637640726023 0.229716003740126 3.788862291197959 502.0 MER34A_dup1023:MER34A:ERV1:LTR 1.6312905942937617 0.0170586342162612 6.579367849801842 502.0 Charlie4a_dup1193:Charlie4a:hAT-Charlie:DNA 1.7905469733140251 0.461154855418863 1.9570771739746275 502.0 LTR88b_dup1331:LTR88b:Gypsy:LTR 1.1762122002952204 0.0198811332927147 5.886604552056498 502.0 AluSp_dup1142:AluSp:Alu:SINE 1.346433214745646 0.2089834518128584 2.6876820583274768 502.0 Tigger3b_dup1661:Tigger3b:TcMar-Tigger:DNA 1.148447326952616 0.3752794373866462 1.613647541445928 502.0 AluSc8_dup3929:AluSc8:Alu:SINE 1.243742868138865 0.4240188533349215 1.552487934483692 502.0 AluJr_dup30890:AluJr:Alu:SINE 1.3064250384088274 0.4309280836060434 1.6001053192442751 502.0 AluJb_dup110334:AluJb:Alu:SINE 1.4345467676134342 0.0376756510949624 5.25081874780767 502.0 AluSp_dup11449:AluSp:Alu:SINE 1.1342363091541563 0.46236865931507 1.2946057294610696 502.0 L1PA6_dup546:L1PA6:L1:LINE 1.9965363629475883 0.2927699401366612 2.769660008981777 502.0 LTR8_dup2971:LTR8:ERV1:LTR 3.030860960331466 0.2447948664736123 3.6300824614222416 502.0 AluJr4_dup4313:AluJr4:Alu:SINE 1.1423359140543188 0.0007489705087858 10.574790417248318 502.0 X9_LINE_dup501:X9_LINE:L1:LINE 1.9761999089399616 0.3437392533533853 2.523342379823953 502.0 AluSc_dup13832:AluSc:Alu:SINE 3.1359140164592656 0.4159080058002372 2.914549642023463 502.0 SVA_D_dup1229:SVA_D:SVA:Retroposon 1.1342495796522174 0.476847412502663 1.2501385311378177 502.0 Tigger14a_dup108:Tigger14a:TcMar-Tigger:DNA 1.009625899024606 0.0078075927274636 7.014727310103416 502.0 AluJb_dup56968:AluJb:Alu:SINE 1.235187719160256 0.0002169198745066 12.47528045252847 502.0 L1ME1_dup6617:L1ME1:L1:LINE 1.1624042579176193 0.4453241998369115 1.3841839746708942 502.0 AluSz6_dup36815:AluSz6:Alu:SINE 1.62841869933328 0.0012375329650786 10.361789022157032 502.0 AluJr_dup72800:AluJr:Alu:SINE 3.0408983926964 0.1893768988027336 4.005165352498187 502.0 AluSx1_dup105873:AluSx1:Alu:SINE 1.4046023952129565 0.0188810566591458 6.217078484310653 502.0 L1M3_dup291:L1M3:L1:LINE 1.1397011898258065 0.3648644439828962 1.643223151639074 502.0 L1MC1_dup2137:L1MC1:L1:LINE 1.2042192408896564 0.3234029913481031 1.8966931456125808 502.0 AluSg_dup12174:AluSg:Alu:SINE 1.0399908073019095 0.1305958981465632 2.9933892866709715 502.0 AluJr_dup44423:AluJr:Alu:SINE 1.0948627566623994 0.1951206886456881 2.488311376199742 502.0 AluSx_dup91179:AluSx:Alu:SINE 11.338942865600067 0.0045621159872568 11.279295396833884 502.0 AluJr_dup39110:AluJr:Alu:SINE 1.0404728964887529 0.0573479168884429 4.1813544916599 502.0 AluSq2_dup25958:AluSq2:Alu:SINE 1.0483672628645049 0.0949023208327711 3.4655570298021567 501.0 Tigger1_dup3188:Tigger1:TcMar-Tigger:DNA 1.2529691912903969 0.285655789289939 2.133001267354003 501.0 AluY_dup64372:AluY:Alu:SINE 1.6767132008831576 0.3489879065155246 2.2643869906452023 501.0 MER91A_dup310:MER91A:hAT-Tip100:DNA 1.3041621898791915 0.2429577157553869 2.4243461441685734 501.0 AluJr_dup60568:AluJr:Alu:SINE 2.4364888010871715 0.494428858352303 2.3009687347778858 501.0 L1ME1_dup14741:L1ME1:L1:LINE 1.1935286187833651 0.2188578600898351 2.4471670570456334 501.0 HAL1M8_dup1066:HAL1M8:L1:LINE 1.8390974932074844 0.3402307778492503 2.4344124004787124 501.0 AluSg_dup2232:AluSg:Alu:SINE 1.1456493126983571 0.0054118856345216 7.725818430082433 501.0 AluSc_dup26247:AluSc:Alu:SINE 1.6368109521386809 0.0255733500930304 6.000102728167161 501.0 AluJb_dup74892:AluJb:Alu:SINE 1.0714235979598992 0.0579806206136352 4.207814390640314 500.0 AluJb_dup73373:AluJb:Alu:SINE 2.054564280229072 0.000524734054382 11.934958426144462 500.0 Tigger1_dup324:Tigger1:TcMar-Tigger:DNA 3.250534866687885 0.2214501882032552 3.8756230007911 499.0 AluJo_dup31358:AluJo:Alu:SINE 1.0349885509042276 0.2549609110980715 2.02126682385312 499.0 SVA_D_dup510:SVA_D:SVA:Retroposon 1.361304798526969 0.209081615354236 2.702852009197794 498.0 L1HS_dup1616:L1HS:L1:LINE 1.1085898246764976 0.2468976263073953 2.1667407993704644 498.0 SVA_E_dup408:SVA_E:SVA:Retroposon 2.2329970574096665 0.275459818795955 3.019067556054696 498.0 LTR13A_dup7:LTR13A:ERVK:LTR 1.4968869294777094 0.2457820778445239 2.60651362354635 497.0 AluSz_dup37824:AluSz:Alu:SINE 1.830610051686245 0.0026438264880892 9.43548129492179 497.0 L1PB1_dup5905:L1PB1:L1:LINE 21.40037190329823 0.2056128638309657 6.701561531088144 496.0 AluJo_dup70939:AluJo:Alu:SINE 1.6462319927223998 0.002178492838753 9.561621573573683 496.0 L1PA2_dup219:L1PA2:L1:LINE 1.455246509855887 0.4502185352130829 1.6925661995761805 495.0 L1MDa_dup2979:L1MDa:L1:LINE 1.2047758210331163 0.1455468842828891 3.04920886040083 495.0 Tigger1_dup11946:Tigger1:TcMar-Tigger:DNA 1.0861641370613664 0.126984307270513 3.096520009522043 495.0 LTR1_dup85:LTR1:ERV1:LTR 1.961039395768969 0.0003248618387484 12.55950461657401 495.0 L1PA3_dup2320:L1PA3:L1:LINE 1.733208157752415 0.1456232774921604 3.573132042088964 495.0 SVA_F_dup805:SVA_F:SVA:Retroposon 1.3784163950761863 0.1539008476170439 3.162938683873132 494.0 L1PA3_dup1321:L1PA3:L1:LINE 3.228419307734538 0.2637255971055219 3.6137184577610943 494.0 L1ME2_dup8015:L1ME2:L1:LINE 2.193146652006612 0.2483043414678888 3.142820894219012 493.0 L1PA2_dup2288:L1PA2:L1:LINE 1.0358470481420323 0.0689309341738281 3.909515614701912 493.0 SVA_D_dup1293:SVA_D:SVA:Retroposon 6.990441010193571 0.2829324247822702 4.62685404677212 492.0 HERVK-int_dup102:HERVK-int:ERVK:LTR 1.1194352082830012 0.4463608682754711 1.3264885698375133 491.0 L1PA3_dup10531:L1PA3:L1:LINE 1.266666796754572 0.2916078731282124 2.1189354893386727 491.0 Tigger1_dup9834:Tigger1:TcMar-Tigger:DNA 1.044883763241324 0.2064126540684672 2.3397391378765025 491.0 THE1B-int_dup939:THE1B-int:ERVL-MaLR:LTR 1.2204855536843078 0.0652411634448219 4.225528898648407 491.0 MLT1F2_dup2599:MLT1F2:ERVL-MaLR:LTR 5.300561506445474 0.036508973437587 7.181750283599862 491.0 MLT1H_dup5996:MLT1H:ERVL-MaLR:LTR 1.198635567816665 0.3809416565570796 1.6537511270270293 490.0 MER5A_dup15478:MER5A:hAT-Charlie:DNA 3.8474013149314463 0.0264533532187904 7.184289902462043 489.0 SVA_D_dup1026:SVA_D:SVA:Retroposon 4.257143864425426 0.3514679219565426 3.598420917450145 489.0 LTR33A_dup208:LTR33A:ERVL:LTR 1.751561995280389 0.0975560632045876 4.166266701448167 489.0 AluSx1_dup69050:AluSx1:Alu:SINE 4.703432281177904 0.0023214614879023 10.984464870210113 489.0 SVA_D_dup775:SVA_D:SVA:Retroposon 1.2848477161067438 0.0874932661462981 3.876281581634124 488.0 AluJb_dup92890:AluJb:Alu:SINE 1.0101707983900805 0.2068277339241644 2.288097685179774 488.0 MLT1D_dup12665:MLT1D:ERVL-MaLR:LTR 1.744960153610326 0.3099433841415775 2.493117478129148 488.0 THE1B-int_dup1996:THE1B-int:ERVL-MaLR:LTR 1.980991931743807 0.2358979979729452 3.069987924549158 487.0 SVA_F_dup842:SVA_F:SVA:Retroposon 2.756514949480428 0.1714938602276479 4.006616594161343 487.0 MER58A_dup5652:MER58A:hAT-Charlie:DNA 2.6778708822075474 0.020634993768474 7.01984958761595 484.0 SVA_F_dup4:SVA_F:SVA:Retroposon 1.5065420807830687 0.2036143221834308 2.887330021976079 484.0 SVA_D_dup452:SVA_D:SVA:Retroposon 1.5063828574396587 0.1174757805189742 3.6806532290911695 484.0 SVA_F_dup683:SVA_F:SVA:Retroposon 1.8546114936796516 0.0829394271016015 4.4829151087595465 483.0 L1P3_dup670:L1P3:L1:LINE 2.183426136896085 0.060595092738805 5.171248954258108 483.0 SVA_D_dup280:SVA_D:SVA:Retroposon 1.022591360821104 0.241565249229772 2.081744909429308 482.0 L1PA3_dup945:L1PA3:L1:LINE 1.0641318038252257 0.0563046554602253 4.24027883034737 482.0 L1MB7_dup7884:L1MB7:L1:LINE 1.663382698896682 0.075209377654616 4.467063762412138 479.0 L1PA3_dup5927:L1PA3:L1:LINE 1.038066655224851 0.3372797959799246 1.621881278943218 479.0 Tigger1_dup5122:Tigger1:TcMar-Tigger:DNA 1.212453697301262 0.115689182433559 3.3896037768602616 478.0 L1ME1_dup20737:L1ME1:L1:LINE 1.693443910812395 0.3279391910638228 2.368459974126122 477.0 SVA_C_dup26:SVA_C:SVA:Retroposon 1.9575035595213544 0.0744788955417672 4.716039441564305 476.0 L1P4_dup2393:L1P4:L1:LINE 1.0496562154306903 0.1836211835218236 2.515112481689864 474.0 L1MB3_dup16438:L1MB3:L1:LINE 1.135199810813659 0.128195983415517 3.146523288236907 473.0 L1PA3_dup5540:L1PA3:L1:LINE 1.5135165255506606 0.0749513500708071 4.335806152165452 470.0 L1ME3G_dup9716:L1ME3G:L1:LINE 1.162874050545019 0.102023693220256 3.5107187118144885 470.0 SVA_F_dup909:SVA_F:SVA:Retroposon 1.1615710171716431 0.2301661439299303 2.3353298192941225 469.0 L1PB1_dup500:L1PB1:L1:LINE 1.1704651704400395 0.014663390105224 6.318719508367696 469.0 SVA_F_dup394:SVA_F:SVA:Retroposon 1.385153198310789 0.0859803918566289 4.00989405189198 468.0 SVA_C_dup119:SVA_C:SVA:Retroposon 1.7262149826194688 0.0479649960045823 5.1694864017487925 467.0 SVA_D_dup132:SVA_D:SVA:Retroposon 1.3983671137746794 0.0922211982552955 3.922500940209908 465.0 SVA_D_dup517:SVA_D:SVA:Retroposon 1.8458154546262728 0.1042097672883524 4.146695910147395 465.0 L1PA15_dup6276:L1PA15:L1:LINE 1.0749105236661216 0.1675036115542428 2.6819524667854697 464.0 L1PA2_dup1045:L1PA2:L1:LINE 1.4826481700335392 0.0698587312945281 4.407592036861196 463.0 AluJb_dup87692:AluJb:Alu:SINE 1.9445014765074065 0.000958979254526 10.985613103849442 458.0 LTR2752_dup21:LTR2752:ERV1:LTR 1.992639235350852 0.0780133736102343 4.674815263326301 458.0 L1MB3_dup10872:L1MB3:L1:LINE 1.0908155084765183 0.2100936896188283 2.3763023818358606 457.0 L1PA7_dup11190:L1PA7:L1:LINE 4.239264443723659 0.2252305955007206 4.234339241306258 456.0 L1MB3_dup16437:L1MB3:L1:LINE 1.0930792557930284 0.0982233447456923 3.4761882492556038 455.0 SVA_A_dup7:SVA_A:SVA:Retroposon 1.134990603868384 0.1232159385352189 3.203419561770889 454.0 L1PBa1_dup38:L1PBa1:L1:LINE 1.977028700736093 0.14023199016772 3.817446410788273 449.0 SVA_D_dup572:SVA_D:SVA:Retroposon 1.6639664035240398 0.0779356966125725 4.416198222482108 449.0 SVA_D_dup717:SVA_D:SVA:Retroposon 1.1539223342303233 0.0972128594367668 3.5692551472207628 448.0 MLT1C_dup7742:MLT1C:ERVL-MaLR:LTR 1.4478089862038896 0.0430416878633181 5.071992811915052 438.0 AluJr_dup29921:AluJr:Alu:SINE 1.0442860526024642 0.0397510893633695 4.715378743840558 436.0 MLT1D_dup15897:MLT1D:ERVL-MaLR:LTR 1.011600261695961 0.0585867893101161 4.109920115978187 434.0 AluSz_dup11808:AluSz:Alu:SINE 1.0215032426933477 0.0905077193686202 3.49650912924218 421.0 AluSp_dup48944:AluSp:Alu:SINE 1.1600802719486476 0.3319044745033751 1.8053846522689043 410.0 HERVH-int_dup1969:HERVH-int:ERV1:LTR 1.0432438340265249 0.2118301363735582 2.3000966372416904 404.0 LTR7Y_dup61:LTR7Y:ERV1:LTR 1.1571623652672294 0.2488539134292584 2.2172203280935143 400.0 MER30_dup2921:MER30:hAT-Charlie:DNA 1.6825888160281113 0.481974385668547 1.8036542778307192 370.0 MADE1_dup7468:MADE1:TcMar-Mariner:DNA 1.3586343511447747 0.0023064850756338 9.202245563605995 340.0 AluSx1_dup39678:AluSx1:Alu:SINE 1.0979164187189252 0.0024502072239592 8.807648745923297 331.0