erv median_tumor mean_normal logfc n_sample L1PB1_dup10508:L1PB1:L1:LINE 3.5593761749066863 0.4940460713329822 2.848906924040595 167.0 AluJo_dup50387:AluJo:Alu:SINE 1.006164112713379 0.0025522745462867 8.622866396003893 167.0 L1MB4_dup8351:L1MB4:L1:LINE 5.641419093844494 0.1814582314154843 4.958348709103421 167.0 AluSx1_dup108546:AluSx1:Alu:SINE 1.0569178612921175 0.0026454172374457 8.642152262866777 167.0 AluSz_dup98854:AluSz:Alu:SINE 2.2600114852897404 0.2321393134284999 3.283267331536494 167.0 AluSx1_dup105715:AluSx1:Alu:SINE 1.1050261007164988 0.069666496377167 3.9874716262298207 167.0 AluSq_dup6019:AluSq:Alu:SINE 1.1653027732824903 0.1171469347444059 3.3143137395680005 167.0 L1MB1_dup5686:L1MB1:L1:LINE 1.2971264661312354 0.1094493581653525 3.5669837457177467 167.0 AluSx_dup91179:AluSx:Alu:SINE 16.86533144622041 0.0045621159872568 11.8520699245722 167.0 AluSp_dup11449:AluSp:Alu:SINE 1.3651549166030783 0.46236865931507 1.5619491600014492 167.0 L1MC1_dup2137:L1MC1:L1:LINE 2.67270719051008 0.3234029913481031 3.046896862877229 167.0 L1M2_dup4231:L1M2:L1:LINE 5.234150870492083 0.1764610938163524 4.890533471666664 167.0 LTR101_Mam_dup1023:LTR101_Mam:ERVL:LTR 1.1427016386976334 0.0727983519973648 3.972399161224821 167.0 AluSz_dup101715:AluSz:Alu:SINE 1.465942234131976 0.4395440284853391 1.7377486644047484 167.0 AluJr_dup44423:AluJr:Alu:SINE 1.1625200658656516 0.1951206886456881 2.574816958188598 167.0 LTR8_dup2971:LTR8:ERV1:LTR 3.4577115739852045 0.2447948664736123 3.820172322077293 167.0 MER67C_dup844:MER67C:ERV1:LTR 1.0835225208801562 0.4718080530988913 1.1994571913069283 167.0 L1MC1_dup2138:L1MC1:L1:LINE 1.9709786481360196 0.2278259033593264 3.112908454479001 167.0 AluJb_dup115673:AluJb:Alu:SINE 5.2432756082673055 0.4649285931816585 3.4953873221998704 167.0 L1MC5_dup2220:L1MC5:L1:LINE 4.235986276787643 0.4393122126493036 3.2693794042100475 167.0 SVA_D_dup628:SVA_D:SVA:Retroposon 1.0101105398307495 0.4952733165024275 1.0282163795429666 167.0 AluSx1_dup105716:AluSx1:Alu:SINE 3.548020663494943 0.3428079823606823 3.371541803415763 167.0 AluJb_dup103497:AluJb:Alu:SINE 1.2425726350352255 0.3217908410714272 1.9491350182711376 167.0 L1MD2_dup3350:L1MD2:L1:LINE 2.4981694903268234 0.265229905058228 3.235556005374657 167.0 MER34A_dup1023:MER34A:ERV1:LTR 1.0585727722027258 0.0170586342162612 5.955474498202988 167.0 AluSz6_dup43939:AluSz6:Alu:SINE 2.602844144589336 0.1577247637628512 4.044607832290897 167.0 MLT1D_dup253:MLT1D:ERVL-MaLR:LTR 1.5619572198660965 0.3630010703550197 2.105309233024533 167.0 AluJb_dup107864:AluJb:Alu:SINE 6.4061667072222415 0.0002278324850216 14.779200255913096 167.0 L1MB4_dup8350:L1MB4:L1:LINE 1.5795277245356854 0.0459558965036179 5.103099467340697 167.0 AluSc8_dup7305:AluSc8:Alu:SINE 1.0583905498424586 0.0449135051643763 4.558578956918022 167.0 AluJb_dup92890:AluJb:Alu:SINE 4.115564282922942 0.2068277339241644 4.314588693932585 167.0 AluSc8_dup3929:AluSc8:Alu:SINE 1.2525370693901294 0.4240188533349215 1.5626529827468538 167.0 AluJb_dup121098:AluJb:Alu:SINE 3.0185963749456906 0.2333632279839523 3.6932287103164994 167.0 AluSp_dup17171:AluSp:Alu:SINE 3.018159498657361 0.2092895351215914 3.850096968030619 167.0 MER65-int_dup826:MER65-int:ERV1:LTR 7.466324867312558 0.0416066207026206 7.487441355710634 167.0 AluSx3_dup29942:AluSx3:Alu:SINE 2.442174581018575 0.0786573993334847 4.956440039189709 167.0 AluY_dup64372:AluY:Alu:SINE 1.6313637069843636 0.3489879065155246 2.2248295131820046 167.0 MER65-int_dup830:MER65-int:ERV1:LTR 2.746904933090906 0.0105726313913534 8.021328681632342 167.0 AluSz6_dup36815:AluSz6:Alu:SINE 1.131085365882481 0.0012375329650786 9.836025146117922 167.0 THE1D-int_dup348:THE1D-int:ERVL-MaLR:LTR 3.127616043846086 0.4818669853647762 2.6983565488891 167.0 AluSz_dup95216:AluSz:Alu:SINE 1.257768964926876 0.3989752402623974 1.6564958199802295 167.0 AluJb_dup56968:AluJb:Alu:SINE 1.0934663421235782 0.0002169198745066 12.299458952337355 167.0 OldhAT1_dup3754:OldhAT1:hAT-Ac:DNA 3.113111754082495 0.229716003740126 3.7604340931271474 167.0 L1PA3_dup1321:L1PA3:L1:LINE 1.9525739904257489 0.2637255971055219 2.8882677080442107 167.0 MLT1A1_dup678:MLT1A1:ERVL-MaLR:LTR 1.1027524096752666 0.0336665895774405 5.033647519021231 167.0 MLT1G3_dup1805:MLT1G3:ERVL-MaLR:LTR 4.007486478816104 0.0142088782447376 8.13976118061168 167.0 L1PA4_dup2621:L1PA4:L1:LINE 1.2034399740879682 0.336922826835025 1.836674103169964 167.0 AluSz6_dup43940:AluSz6:Alu:SINE 3.9852736944058695 0.3287952390102888 3.599417492868863 167.0 L1PA8_dup87:L1PA8:L1:LINE 1.120908416789211 0.1934062157770234 2.534962341684548 167.0 AluY_dup97854:AluY:Alu:SINE 5.393641545477015 0.0051946344782714 10.020021692642452 167.0 MLT1C_dup18222:MLT1C:ERVL-MaLR:LTR 3.768511175236069 0.3136195045638514 3.5869074797165115 167.0 SVA_D_dup685:SVA_D:SVA:Retroposon 1.0759201131958562 0.3184438096368929 1.756460229924525 167.0 AluSc_dup26247:AluSc:Alu:SINE 3.632267342523289 0.0255733500930304 7.150085416586943 167.0 AluSp_dup1142:AluSp:Alu:SINE 1.6848159637231557 0.2089834518128584 3.0111303978642896 167.0 AluSx3_dup29941:AluSx3:Alu:SINE 1.7002377944482945 0.0583639242761596 4.864515834379461 167.0 L1MB8_dup3477:L1MB8:L1:LINE 1.6100284825819264 0.3003449133866926 2.4223940750606503 167.0 AluJb_dup105930:AluJb:Alu:SINE 1.2081717110017025 0.4201583608019265 1.5238204138237117 167.0 AluSz_dup93694:AluSz:Alu:SINE 7.678941996538139 0.1659909287906949 5.531731243085637 167.0 L1MB7_dup19903:L1MB7:L1:LINE 4.475709019887526 0.3704688365676228 3.59469215033648 167.0 MER65-int_dup829:MER65-int:ERV1:LTR 6.17914408450021 0.0139534672083954 8.790639551464832 167.0 X9_LINE_dup501:X9_LINE:L1:LINE 1.3024296107107731 0.3437392533533853 1.9218188897345037 167.0 AluSc_dup13832:AluSc:Alu:SINE 3.391072409337136 0.4159080058002372 3.027405229704692 167.0 L1PA6_dup546:L1PA6:L1:LINE 4.843880078158653 0.2927699401366612 4.048323809051166 167.0 AluSx_dup105968:AluSx:Alu:SINE 4.178842738036722 0.3124682729523712 3.7413218512885287 167.0 L1MB3_dup11147:L1MB3:L1:LINE 1.1915353329944078 0.2287918284534982 2.3807143021371293 167.0 L1MC3_dup9063:L1MC3:L1:LINE 1.2798113348996425 0.1301273427796256 3.297935106293732 167.0 Tigger19b_dup1295:Tigger19b:TcMar-Tigger:DNA 1.1145585024791962 0.2964794116636536 1.9104685160495616 167.0 MER4E1_dup202:MER4E1:ERV1:LTR 1.0995562173081432 0.0356289563194822 4.94772733374927 167.0 AluSc_dup33256:AluSc:Alu:SINE 1.3431928448831256 0.0277790638852019 5.595524656647963 167.0 L1MB4_dup8349:L1MB4:L1:LINE 2.456615812370128 0.0855613051879158 4.843569953372009 167.0 AluSz_dup93949:AluSz:Alu:SINE 4.037512202875944 0.3588066818941023 3.492187957903177 167.0 AluJr_dup30890:AluJr:Alu:SINE 1.6130567521277974 0.4309280836060434 1.9042781705462712 167.0 L1MB2_dup2034:L1MB2:L1:LINE 1.0835225208801562 0.2358614318871796 2.1997177068113496 167.0 HERVH-int_dup4765:HERVH-int:ERV1:LTR 2.583310204095973 0.3800345561863495 2.765018380251348 167.0 AluJb_dup67344:AluJb:Alu:SINE 1.4295008415770651 0.4295932882606487 1.734468110609718 167.0 HUERS-P3-int_dup372:HUERS-P3-int:ERV1:LTR 1.569097916641449 0.0102572563970316 7.257146681998121 167.0 AluSx1_dup105873:AluSx1:Alu:SINE 1.0442797868527882 0.0188810566591458 5.789424979120958 167.0 AluSx4_dup10100:AluSx4:Alu:SINE 3.901729294199466 0.4987342787699046 2.967770415663389 167.0 MLT1B_dup948:MLT1B:ERVL-MaLR:LTR 1.152162717990848 0.1940662173317227 2.569723577063958 167.0 LTR16B2_dup1420:LTR16B2:ERVL:LTR 2.392668054008601 0.1104633581990186 4.436980461246581 167.0 AluJr_dup79343:AluJr:Alu:SINE 1.8060348606922203 0.0536068752531314 5.0742638874464046 167.0 AluSg_dup24620:AluSg:Alu:SINE 1.6556220644342563 0.0161472712512016 6.679939187777207 166.0 AluSx1_dup14869:AluSx1:Alu:SINE 1.0872369794599686 0.1270827311353014 3.096826525895648 166.0 AluSx1_dup107630:AluSx1:Alu:SINE 1.387728761052656 0.1247445926159485 3.475676428470616 166.0 AluSx_dup111748:AluSx:Alu:SINE 1.1922004325943754 0.1040014456928037 3.518951313820686 166.0 AluSz_dup71343:AluSz:Alu:SINE 1.2826752810640416 0.0573341797523608 4.483616719657839 166.0 L1PA3_dup1120:L1PA3:L1:LINE 2.2694723138863697 0.4358200479832063 2.380552420495748 166.0 MER5B_dup23397:MER5B:hAT-Charlie:DNA 2.201127460644704 0.0792269695953002 4.796107258850782 166.0 L1PA8_dup4178:L1PA8:L1:LINE 3.393302385778335 0.2856926403965029 3.570154220762187 166.0 L1ME1_dup14741:L1ME1:L1:LINE 1.1977684284273935 0.2188578600898351 2.4522829072612446 166.0 AluSx_dup71151:AluSx:Alu:SINE 1.3246373832759897 0.4573538105707593 1.5342149025130172 166.0 MLT1B_dup8693:MLT1B:ERVL-MaLR:LTR 1.566295719892368 0.0440839697988557 5.150958666276593 166.0 AluSp_dup35077:AluSp:Alu:SINE 1.2538783152890955 0.1142268317756186 3.456423862855043 166.0 AluSg_dup33891:AluSg:Alu:SINE 1.546162058146977 0.0052497421470697 8.202229261993905 166.0 AluJb_dup121097:AluJb:Alu:SINE 1.0849902857203086 0.076701319102932 3.8222869262813406 166.0 AluJr_dup12857:AluJr:Alu:SINE 1.045547347746552 0.1118956272577163 3.2240328322416323 166.0 L1MA5_dup3310:L1MA5:L1:LINE 1.8773051335870057 0.0494638783449475 5.24614398944967 166.0 AluJb_dup73373:AluJb:Alu:SINE 1.587824127289561 0.000524734054382 11.563177081584165 166.0 MSTB_dup6501:MSTB:ERVL-MaLR:LTR 1.599171936925342 0.2367443632259002 2.7559230789663665 166.0 AluSp_dup17164:AluSp:Alu:SINE 1.24180723222323 0.1877517114460719 2.72554327525446 166.0 L1MDa_dup2894:L1MDa:L1:LINE 1.0912488353270513 0.387819386585276 1.492523285286262 166.0 AluSx_dup22112:AluSx:Alu:SINE 1.0833674594083047 0.2374505249881382 2.1898238120093163 166.0 AluSg7_dup3470:AluSg7:Alu:SINE 1.1940113823869898 0.0120808203020236 6.626954360812618 166.0 AluJo_dup65935:AluJo:Alu:SINE 2.9414868640497467 0.4639684686261284 2.6644469255443037 166.0 AluSz_dup33102:AluSz:Alu:SINE 1.191743742362164 0.0595393574084112 4.323086588806062 166.0 AluSx_dup111750:AluSx:Alu:SINE 1.6419929561000868 0.1240420897787655 3.7265462962381424 166.0 L1PB1_dup6616:L1PB1:L1:LINE 1.3489417300459556 0.0196351871970747 6.1022428672389335 166.0 L1PA5_dup623:L1PA5:L1:LINE 1.2218046700572298 0.349441391430942 1.8058912487777037 166.0 LTR7B_dup599:LTR7B:ERV1:LTR 1.259988749812451 0.1328468061351861 3.245575403749648 166.0 SVA_D_dup1229:SVA_D:SVA:Retroposon 1.7935552092458535 0.476847412502663 1.9112225611466929 166.0 AluSx4_dup3234:AluSx4:Alu:SINE 1.4681994723535796 0.3747890471528333 1.9698972914111188 166.0 L1MD2_dup2312:L1MD2:L1:LINE 1.0514561063602528 0.1719973841498203 2.6119300964479324 166.0 HERVH-int_dup3527:HERVH-int:ERV1:LTR 21.712219028858215 0.0139942278604804 10.599459576662769 166.0 AluJo_dup70939:AluJo:Alu:SINE 1.5725371433273254 0.002178492838753 9.495548007861956 166.0 AluY_dup35561:AluY:Alu:SINE 1.0624225169356052 0.1243112229828391 3.0953291727226926 166.0 AluJr_dup81897:AluJr:Alu:SINE 1.269393590318716 0.1427923694035056 3.152148671784031 165.0 AluYb8_dup2486:AluYb8:Alu:SINE 1.2684078954163462 0.0110908870120779 6.837500200611047 165.0 MER1B_dup1640:MER1B:hAT-Charlie:DNA 1.0611391111969546 0.40538276131353 1.388257154959491 165.0 LTR33_dup6907:LTR33:ERVL:LTR 1.8577130742093584 0.1937030753486897 3.261608928773541 165.0 AluSg_dup14868:AluSg:Alu:SINE 1.3487306897136355 0.291097903465529 2.212025950165431 165.0 L1MC4a_dup3658:L1MC4a:L1:LINE 1.2835538192511968 0.2853055880325053 2.169563880081838 165.0 HERV35I-int_dup77:HERV35I-int:ERV1:LTR 1.374707674914925 0.1976016791882729 2.798457757088758 165.0 L1PA8_dup4283:L1PA8:L1:LINE 1.3334788990811886 0.1348659474275502 3.305596965492586 165.0 MER20_dup13649:MER20:hAT-Charlie:DNA 1.2071661244076437 0.2550138660579453 2.2429766274653757 165.0 L1PB4_dup3416:L1PB4:L1:LINE 2.0522138875787674 0.0696235306653889 4.881462314197986 165.0 MER65-int_dup835:MER65-int:ERV1:LTR 2.855152303524067 0.0130686126071448 7.771317906108236 165.0 Charlie4z_dup5110:Charlie4z:hAT-Charlie:DNA 1.509542073658741 0.03266398521738 5.530266337937434 165.0 L1PB1_dup6369:L1PB1:L1:LINE 1.3559416695149076 0.0528218339316227 4.682016915517798 165.0 AluJr_dup72800:AluJr:Alu:SINE 1.927278808825239 0.1893768988027336 3.3472330344192534 165.0 AluSp_dup20402:AluSp:Alu:SINE 1.18169879443089 0.2548650978083903 2.213056627071695 165.0 L1MA1_dup2411:L1MA1:L1:LINE 1.861138116413174 0.4902543273978149 1.9245828527896989 165.0 L1MB7_dup19902:L1MB7:L1:LINE 3.100552633239958 0.3417949504753551 3.181322391515634 165.0 L1MEc_dup3336:L1MEc:L1:LINE 1.2782054161778107 0.2420686587065728 2.4006314988247754 164.0 AluSp_dup30039:AluSp:Alu:SINE 1.3726447527803447 0.0074288008312297 7.529613234431038 164.0 AluSx3_dup27550:AluSx3:Alu:SINE 1.2741647690668172 0.0460329000413167 4.79074270782227 164.0 LOR1-int_dup328:LOR1-int:ERV1:LTR 1.0031650600730535 0.096004008244097 3.385320554520343 164.0 SVA_D_dup72:SVA_D:SVA:Retroposon 1.0973216236173324 0.0517021596825601 4.407618084140963 164.0 AluSz_dup37824:AluSz:Alu:SINE 1.6021778473138444 0.0026438264880892 9.243191088266911 164.0 AluSc_dup32446:AluSc:Alu:SINE 23.5742441574838 0.0040187158861641 12.518189309361924 164.0 L1MEc_dup13396:L1MEc:L1:LINE 1.5795277245356854 0.1673385782039856 3.238651272624148 164.0 MLT1B_dup10208:MLT1B:ERVL-MaLR:LTR 1.377932776549079 0.1555601839560434 3.1469607557918797 164.0 MLT1B_dup8692:MLT1B:ERVL-MaLR:LTR 1.438434844799113 0.0509432391282566 4.819465370632996 164.0 L1PA4_dup2620:L1PA4:L1:LINE 1.013496362515487 0.252215488438552 2.006612132169867 163.0 L1PA5_dup2765:L1PA5:L1:LINE 2.072364583223396 0.171219590839865 3.5973581446352583 163.0 AluSx3_dup10216:AluSx3:Alu:SINE 1.0691560521041386 0.0097698074987735 6.773926590213362 163.0 MLT1F2_dup3869:MLT1F2:ERVL-MaLR:LTR 1.2239319941958635 0.0064745323121227 7.562531700421444 163.0 AluSx1_dup69050:AluSx1:Alu:SINE 11.011115200726174 0.0023214614879023 12.211639623965524 163.0 LTR2C_dup54:LTR2C:ERV1:LTR 1.2605227022529324 0.310476164059117 2.0214676827168194 163.0 HERVH-int_dup4763:HERVH-int:ERV1:LTR 1.4922215204417857 0.1694828300693424 3.1382506900886007 163.0 LTR22A_dup16:LTR22A:ERVK:LTR 1.1531067156358563 0.286720784097811 2.007807642124149 162.0 L1MC5_dup2219:L1MC5:L1:LINE 1.2609323700132458 0.100608666825259 3.647664403910969 162.0 MER30_dup2921:MER30:hAT-Charlie:DNA 1.4408559145206146 0.481974385668547 1.5798976911660751 162.0 AluSz_dup51341:AluSz:Alu:SINE 1.3994643920485892 0.1832918428787378 2.9326602919688995 162.0 HERVH-int_dup3525:HERVH-int:ERV1:LTR 6.270115757737098 0.0028617900308425 11.097358537106333 162.0 LTR7Y_dup128:LTR7Y:ERV1:LTR 6.341643114892758 0.000861881152375 12.845080124464504 161.0 L1MB8_dup1763:L1MB8:L1:LINE 1.378825658242245 0.259115602067641 2.411772258932283 161.0 AluSp_dup12528:AluSp:Alu:SINE 1.028181197179306 0.0295741133308953 5.119615808589487 160.0 HERVH-int_dup3524:HERVH-int:ERV1:LTR 7.042109809408059 0.0031813577269869 11.112149403861322 159.0 Tigger1_dup5122:Tigger1:TcMar-Tigger:DNA 1.1050261007164988 0.115689182433559 3.255754570427748 159.0 HERVH-int_dup3522:HERVH-int:ERV1:LTR 8.931502077690672 0.0009310524769523 13.227752719385055 159.0 THE1B-int_dup1996:THE1B-int:ERVL-MaLR:LTR 1.449280543321749 0.2358979979729452 2.619101810637082 159.0 L1PA5_dup6275:L1PA5:L1:LINE 1.1162166121510495 0.128515944637503 3.1185977556028126 158.0 HERV1_I-int_dup2:HERV1_I-int:ERV1:LTR 1.333191888022547 0.0565463038051543 4.559307909728959 157.0 L1PA3_dup1115:L1PA3:L1:LINE 2.0970192649057 0.4680770941019235 2.163522043325645 157.0 AluSp_dup48944:AluSp:Alu:SINE 1.4695659954626048 0.3319044745033751 2.1465501651195145 156.0 AluSp_dup17866:AluSp:Alu:SINE 1.0592955189322166 0.2438156817225686 2.1192422987776824 154.0 AluSx_dup98648:AluSx:Alu:SINE 2.852034213402709 0.3456713924337411 3.044518171618993 151.0 LTR7Y_dup194:LTR7Y:ERV1:LTR 1.0748480714465192 0.2058520431326168 2.384453077971725 151.0 AluY_dup7324:AluY:Alu:SINE 7.165287848032098 0.0815861706738351 6.456556224399042 150.0 MLT1F2_dup937:MLT1F2:ERVL-MaLR:LTR 5.698365976796254 0.4375656225012822 3.702976979687736 150.0 AluJb_dup87692:AluJb:Alu:SINE 1.6108956146689364 0.000958979254526 10.714075784669172 150.0 HERVH-int_dup4926:HERVH-int:ERV1:LTR 2.5725717696648247 0.1938550247259852 3.730161290649528 145.0 L1PA4_dup6523:L1PA4:L1:LINE 1.0315865022486894 0.099529972266873 3.373589949724236 141.0 MLT1L_dup10991:MLT1L:ERVL-MaLR:LTR 1.2581487918053609 0.1256829385754321 3.323441826305287 139.0 L1PB1_dup5905:L1PB1:L1:LINE 2.762565251791248 0.2056128638309657 3.7480061090507393 136.0 AluSz6_dup3545:AluSz6:Alu:SINE 1.4718072247322125 0.0414716037207735 5.149321073527316 135.0