erv median_tumor mean_normal logfc n_sample FAM_dup1589:FAM:Alu:SINE 1.5746791882932645 0.4245540573304889 1.8910377710864843 57.0 AluJb_dup56968:AluJb:Alu:SINE 1.9127764614905745 0.0002169198745066 13.106218420272468 57.0 AluSz6_dup10468:AluSz6:Alu:SINE 1.0857022949383517 0.1745854876239472 2.6366230176999568 57.0 AluJr_dup72800:AluJr:Alu:SINE 6.0949347405704 0.1893768988027336 5.008278514695549 57.0 OldhAT1_dup3754:OldhAT1:hAT-Ac:DNA 4.353524814693143 0.229716003740126 4.244260672304878 57.0 L1M4a2_dup1294:L1M4a2:L1:LINE 1.196662687264622 0.3965450552821637 1.5934598470153372 57.0 LTR12C_dup909:LTR12C:ERV1:LTR 1.1765726293478378 0.3372324181287096 1.8027752460545208 57.0 AluJb_dup84655:AluJb:Alu:SINE 1.9039581900052924 0.1110143580584994 4.100183613180134 57.0 AluSp_dup1142:AluSp:Alu:SINE 2.136494104603725 0.2089834518128584 3.353784722791641 57.0 AluJo_dup50387:AluJo:Alu:SINE 1.0142842153185418 0.0025522745462867 8.63446272803663 57.0 L1M4_dup669:L1M4:L1:LINE 1.2498128405271312 0.3377737044666122 1.8875831430265324 57.0 LTR45C_dup385:LTR45C:ERV1:LTR 1.0401427311592837 0.3647376412542928 1.5118505125090882 57.0 LTR2C_dup54:LTR2C:ERV1:LTR 1.0400777312493226 0.310476164059117 1.74413693472729 57.0 AluJr_dup30890:AluJr:Alu:SINE 1.9731238683826315 0.4309280836060434 2.1949625009933595 57.0 AluJr_dup44423:AluJr:Alu:SINE 1.1667824503784925 0.1951206886456881 2.580096931759986 57.0 AluJo_dup72535:AluJo:Alu:SINE 4.338210597424566 0.2207392627405336 4.296684921278278 57.0 AluSx_dup1495:AluSx:Alu:SINE 1.0724459383518692 0.4657500432296196 1.2032771155873188 57.0 AluSz_dup102163:AluSz:Alu:SINE 2.1239754173825807 0.0002179491274605 13.250488020216618 57.0 AluSx3_dup2817:AluSx3:Alu:SINE 1.957081174578764 0.445978079987771 2.133658888474659 57.0 L1PA6_dup546:L1PA6:L1:LINE 1.7909116324611971 0.2927699401366612 2.6128548142621044 57.0 L1MEd_dup7667:L1MEd:L1:LINE 1.2705716062392984 0.4417392873998776 1.5242106307887726 57.0 AluSz6_dup36815:AluSz6:Alu:SINE 1.039667206958421 0.0012375329650786 9.7144391305532 57.0 L1PA16_dup9955:L1PA16:L1:LINE 1.07911654270244 0.3219703407305705 1.744850980418961 57.0 L1ME2_dup6212:L1ME2:L1:LINE 1.4462195328382224 0.3110239387175528 2.2171890364491507 57.0 MLT2A1_dup2398:MLT2A1:ERVL:LTR 1.0425157249624926 0.379735714402909 1.45700154806582 57.0 AluSz_dup37824:AluSz:Alu:SINE 2.1943536598344653 0.0026438264880892 9.69695284837863 57.0 L1MD2_dup3350:L1MD2:L1:LINE 1.262166483914669 0.265229905058228 2.2505868633955366 57.0 AluSc8_dup19972:AluSc8:Alu:SINE 1.795611398991824 0.184113349524997 3.2858090187591875 57.0 L1PA4_dup6539:L1PA4:L1:LINE 1.0210339327600568 0.3652598472434726 1.4830357400573386 57.0 AluSz_dup82310:AluSz:Alu:SINE 1.1092071715006704 0.3857661967302258 1.523730213173272 57.0 MSTB1_dup759:MSTB1:ERVL-MaLR:LTR 1.6105626615698383 0.0685065166574448 4.5551797515522665 57.0 L1PB1_dup6616:L1PB1:L1:LINE 1.392104040287555 0.0196351871970747 6.14768187387549 57.0 AluSx3_dup10764:AluSx3:Alu:SINE 1.0395585869230626 0.3598561387990731 1.5304788925105657 57.0 Charlie2b_dup1135:Charlie2b:hAT-Charlie:DNA 1.12809750191833 0.411852314814177 1.4536927633183978 57.0 AluJb_dup12281:AluJb:Alu:SINE 1.0417413798660653 0.3680114971951621 1.501174418255719 57.0 Charlie1a_dup2161:Charlie1a:hAT-Charlie:DNA 1.487647624232578 0.0886171994344632 4.069302294621909 57.0 MLT1D_dup1540:MLT1D:ERVL-MaLR:LTR 1.1782136606270546 0.1102221352515201 3.418115299402759 57.0 AluSp_dup11449:AluSp:Alu:SINE 2.295263757494079 0.46236865931507 2.31154443252026 57.0 L1MA2_dup458:L1MA2:L1:LINE 1.556278868352152 0.4119820528890241 1.917447202859156 57.0 Tigger14a_dup108:Tigger14a:TcMar-Tigger:DNA 5.160374242172748 0.0078075927274636 9.368382183033148 57.0 MLT1A_dup998:MLT1A:ERVL-MaLR:LTR 1.0107480870626295 0.3885414793287321 1.3792829441323269 57.0 AluSx1_dup106299:AluSx1:Alu:SINE 1.1251891812216337 0.0529236029102745 4.41011249585334 57.0 AluSq2_dup1345:AluSq2:Alu:SINE 1.0559613380319537 0.4875011720503911 1.1150794216871671 57.0 MER1B_dup1640:MER1B:hAT-Charlie:DNA 1.192929778872747 0.40538276131353 1.557152476734369 57.0 AluSx_dup93726:AluSx:Alu:SINE 1.0728381374740077 0.1986652734758503 2.433020810642927 57.0 AluSx_dup105155:AluSx:Alu:SINE 1.480317945126425 0.0067619152491489 7.77425942397087 57.0 AluSg_dup4369:AluSg:Alu:SINE 1.1507155773576931 0.1725865480199448 2.737139360782572 57.0 AluSx1_dup91475:AluSx1:Alu:SINE 1.0679870248508736 0.3830205142606082 1.4794005507135268 57.0 AluJb_dup107864:AluJb:Alu:SINE 9.784689480809806 0.0002278324850216 15.390264981507476 57.0 L1MC1_dup5266:L1MC1:L1:LINE 1.6578105775492191 0.133159998821808 3.638046505093959 57.0 LTR8_dup2971:LTR8:ERV1:LTR 4.886372639663874 0.2447948664736123 4.319118680070909 57.0 AluSx1_dup6801:AluSx1:Alu:SINE 1.1102189398660076 0.2092392858767764 2.407618553786349 57.0 AluSp_dup17164:AluSp:Alu:SINE 1.716178168468916 0.1877517114460719 3.192301373120709 57.0 AluSx_dup100421:AluSx:Alu:SINE 1.385903713690397 0.0059828671783624 7.8557742786657 57.0 L1M3_dup291:L1M3:L1:LINE 3.4527870294196044 0.3648644439828962 3.2423288780432253 57.0 AluY_dup87815:AluY:Alu:SINE 1.7178197048106008 0.3015034731004288 2.5103320990395908 57.0 L1PA11_dup257:L1PA11:L1:LINE 1.4768108003533935 0.4810012897383803 1.6183723414894764 57.0 AluSx4_dup7329:AluSx4:Alu:SINE 1.276001302250472 0.0027908800155052 8.836693984220265 57.0 AluSp_dup17171:AluSp:Alu:SINE 8.115451377822836 0.2092895351215914 5.277099258077146 57.0 HAL1ME_dup7566:HAL1ME:L1:LINE 1.2057254596888602 0.4941362606086044 1.286920614667434 57.0 L1MDa_dup6462:L1MDa:L1:LINE 1.003331552956199 0.2418254919538813 2.0527601873192527 57.0 L1ME4b_dup12350:L1ME4b:L1:LINE 1.2684367725316916 0.4751386128622132 1.4166312480821457 57.0 MER41E_dup6:MER41E:ERV1:LTR 1.0535990834231768 0.2370145571784011 2.152278419907001 57.0 AluSx1_dup105873:AluSx1:Alu:SINE 1.5418174394456636 0.0188810566591458 6.351548635359448 57.0 L1M3a_dup108:L1M3a:L1:LINE 1.0449303142068882 0.3976775094169898 1.3937358548300265 57.0 AluSz_dup93694:AluSz:Alu:SINE 6.003295042600297 0.1659909287906949 5.17657826626859 57.0 MLT1D_dup19387:MLT1D:ERVL-MaLR:LTR 1.051280711851896 0.4897597215684786 1.102001912719219 57.0 AluJr_dup60568:AluJr:Alu:SINE 2.810267501310636 0.494428858352303 2.5068726063279745 57.0 LTR88b_dup1331:LTR88b:Gypsy:LTR 1.0727763002946316 0.0198811332927147 5.753805462750743 57.0 L1ME1_dup14741:L1ME1:L1:LINE 3.0620467916256477 0.2188578600898351 3.8064302259007095 57.0 AluJr_dup22765:AluJr:Alu:SINE 1.0829736018415963 0.0077154739460939 7.133027580062 57.0 AluSc_dup13832:AluSc:Alu:SINE 2.9615849944322203 0.4159080058002372 2.832033129829437 57.0 L1ME4a_dup26355:L1ME4a:L1:LINE 1.9228146061599087 0.0391026215980412 5.619810522570786 57.0 Tigger4b_dup2156:Tigger4b:TcMar-Tigger:DNA 1.1745076635156908 0.4872832370944458 1.2692236280708915 57.0 MER5B_dup24322:MER5B:hAT-Charlie:DNA 1.0567109316626575 0.0526691295406112 4.326479347967345 57.0 MLT1A_dup927:MLT1A:ERVL-MaLR:LTR 1.0107480870626295 0.4047849785039971 1.320195815182956 57.0 L1PB4_dup4032:L1PB4:L1:LINE 1.1255190416697978 0.396750884237942 1.504285121182587 57.0 AluSx_dup91179:AluSx:Alu:SINE 27.919999438174244 0.0045621159872568 12.579308165864749 57.0 AluSx1_dup30727:AluSx1:Alu:SINE 1.4297852199650607 0.0114292835436527 6.966919664156626 57.0 MER91B_dup847:MER91B:hAT-Tip100:DNA 1.4431172042068567 0.0698424082243744 4.368941359131616 57.0 AluSq_dup1109:AluSq:Alu:SINE 1.4293470986771877 0.0170353827791468 6.390678124151507 57.0 Charlie9_dup289:Charlie9:hAT-Charlie:DNA 1.7749057903014545 0.217036306128723 3.031734146306512 57.0 MER70-int_dup184:MER70-int:ERVL:LTR 1.47920804397988 0.2514137796431354 2.5566893461300424 57.0 MER58B_dup2427:MER58B:hAT-Charlie:DNA 1.3703067208919877 0.1909647897132158 2.8431202908930446 57.0 AluSz_dup47996:AluSz:Alu:SINE 1.005424074364181 0.0574684267580931 4.128890774088092 57.0 AluJb_dup41596:AluJb:Alu:SINE 1.039667206958421 0.0192541253914796 5.75481040054238 57.0 MER58B_dup718:MER58B:hAT-Charlie:DNA 1.0278782929637758 0.4763548115162931 1.109560984471028 57.0 Charlie25_dup1027:Charlie25:hAT-Charlie:DNA 1.0108581745101142 0.1099330958147817 3.2008829122235385 57.0 L1ME3B_dup1986:L1ME3B:L1:LINE 1.340347554862596 0.1295794432389309 3.3706983737191 57.0 L1MC2_dup224:L1MC2:L1:LINE 1.0011039316068675 0.4375982544105512 1.1939128699091066 57.0 LTR6A_dup74:LTR6A:ERV1:LTR 1.0724459383518692 0.4032639769510729 1.4111084812416874 57.0 AluSz_dup1935:AluSz:Alu:SINE 1.2396031008345356 0.2690826147207298 2.2037571815335237 57.0 L1MD_dup8496:L1MD:L1:LINE 1.2451846783367668 0.4946376756638236 1.3319156935365897 57.0 AluSx_dup37265:AluSx:Alu:SINE 1.4889817960728866 0.326388098022754 2.1896657615245485 57.0 AluJo_dup70939:AluJo:Alu:SINE 1.1525704319238077 0.002178492838753 9.04730882826849 57.0 AluJb_dup105930:AluJb:Alu:SINE 1.456199823622997 0.4201583608019265 1.7932032416183152 57.0 L1MEc_dup1517:L1MEc:L1:LINE 1.0966479994330331 0.4888794807084405 1.165549766963926 57.0 AluSx1_dup108546:AluSx1:Alu:SINE 1.7982419448533924 0.0026454172374457 9.408876142923416 57.0 AluSx_dup37266:AluSx:Alu:SINE 1.5395325165526843 0.3125653980463251 2.300262357448686 57.0 AluJb_dup73373:AluJb:Alu:SINE 1.937155244431731 0.000524734054382 11.850065534739974 57.0 AluSx1_dup66787:AluSx1:Alu:SINE 1.093144439854805 0.4606853465061363 1.2466304259418717 57.0 AluSp_dup12528:AluSp:Alu:SINE 2.960710467835425 0.0295741133308953 6.645464688548582 57.0 AluYf1_dup91:AluYf1:Alu:SINE 1.385903713690397 0.2721315892790703 2.348450688287267 57.0 AluJr_dup39110:AluJr:Alu:SINE 1.2489602215765097 0.0573479168884429 4.44484263613198 57.0 MER67C_dup844:MER67C:ERV1:LTR 1.4263147796248932 0.4718080530988913 1.596020462904683 57.0 AluSz6_dup15625:AluSz6:Alu:SINE 1.0163976210040917 0.1136224823205108 3.161144671477166 57.0 AluSx1_dup105804:AluSx1:Alu:SINE 2.027606622311332 0.0039489409214108 9.00409628130416 57.0 AluSx1_dup69050:AluSx1:Alu:SINE 12.837883797605524 0.0023214614879023 12.433086439743288 56.0 LTR1_dup85:LTR1:ERV1:LTR 9.797637337439298 0.0003248618387484 14.8803199889304 56.0 Tigger1_dup9834:Tigger1:TcMar-Tigger:DNA 1.8257115875733751 0.2064126540684672 3.1448555544290584 56.0 AluJo_dup54934:AluJo:Alu:SINE 1.7455048313810595 0.4473838078857841 1.9640594029827927 56.0 Tigger1_dup11946:Tigger1:TcMar-Tigger:DNA 1.917388354182428 0.126984307270513 3.916420450057786 56.0 L1ME3F_dup2940:L1ME3F:L1:LINE 1.004987630189095 0.2924356292749868 1.7809867444784169 56.0 L1ME2z_dup5160:L1ME2z:L1:LINE 2.213891707921978 0.1539361981742103 3.8461802275658585 56.0 L1PB1_dup5905:L1PB1:L1:LINE 3.2964236997852607 0.2056128638309657 4.002899256292567 55.0 MER11C_dup901:MER11C:ERVK:LTR 1.061376289619871 0.166133329013256 2.675522790218354 55.0 L1ME2z_dup5161:L1ME2z:L1:LINE 1.3399835069187933 0.1268761537451228 3.400722396913034 55.0 LTR6B_dup144:LTR6B:ERV1:LTR 3.133547994108929 0.0519581292241098 5.914303792869136 55.0 AluJr_dup26058:AluJr:Alu:SINE 1.9298069963719628 0.0013904138357246 10.43872650942448 55.0 MLT1H1_dup139:MLT1H1:ERVL-MaLR:LTR 2.1476920654608094 0.0690937603363882 4.958087914596232 55.0 L1PA3_dup5653:L1PA3:L1:LINE 1.0222623369742403 0.0005263323012381 10.923503917044863 55.0 MLT1H1_dup140:MLT1H1:ERVL-MaLR:LTR 3.2482427606709616 0.286716771863292 3.501961253362795 55.0 AluSx_dup50714:AluSx:Alu:SINE 1.2057254596888602 1e-05 16.87954192144686 54.0 MER5A_dup15478:MER5A:hAT-Charlie:DNA 1.5724327454790432 0.0264533532187904 5.893403893185643 54.0 LTR43_dup339:LTR43:ERV1:LTR 1.266702933869914 0.4910537442065089 1.367125388002169 53.0 MER58A_dup5652:MER58A:hAT-Charlie:DNA 1.0814167772186851 0.020634993768474 5.711685830942215 53.0 MLT1F2_dup2599:MLT1F2:ERVL-MaLR:LTR 1.5245729845070572 0.036508973437587 5.384010303092178 53.0 MER57A-int_dup1703:MER57A-int:ERV1:LTR 1.2215612200634232 0.266030358890427 2.199063369965259 52.0 AluSc_dup579:AluSc:Alu:SINE 1.074647821172683 0.0398418542714214 4.753435340273152 50.0 AluJb_dup87692:AluJb:Alu:SINE 1.373114599229042 0.000958979254526 10.483664810479494 48.0 AluSp_dup48944:AluSp:Alu:SINE 1.805036094197657 0.3319044745033751 2.4431877020243467 48.0 AluSx1_dup39678:AluSx1:Alu:SINE 1.1468118348216436 0.0024502072239592 8.870509213738208 40.0 LTR8B_dup1149:LTR8B:ERV1:LTR 1.4429382840866514 0.0005048542445534 11.480855044773255 38.0